RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 APOBRQ0VD83 1088 aa24.46■■□□□ 1.51
TRIM3-202ENST00000359518 ARID5BQ14865 1188 aa24.46■■□□□ 1.51
TRIM3-202ENST00000359518 ZNF609O15014 1411 aa24.46■■□□□ 1.51
TRIM3-202ENST00000359518 KRT32Q14532 448 aa24.45■■□□□ 1.51
TRIM3-202ENST00000359518 CCDC144BQ3MJ40 725 aa24.45■■□□□ 1.51
TRIM3-202ENST00000359518 ZSCAN25Q6NSZ9 544 aa24.45■■□□□ 1.51
TRIM3-202ENST00000359518 CCDC144CPQ8IYA2 1237 aa24.45■■□□□ 1.51
TRIM3-202ENST00000359518 A0A087WZG4 1122 aa24.45■■□□□ 1.5
TRIM3-202ENST00000359518 RAPGEF4Q8WZA2 1011 aa24.45■■□□□ 1.5
TRIM3-202ENST00000359518 USPL1Q5W0Q7 1092 aa24.45■■□□□ 1.5
TRIM3-202ENST00000359518 PDCL2Q8N4E4 241 aa24.45■■□□□ 1.5
TRIM3-202ENST00000359518 CACTINQ8WUQ7 758 aaKnown RBP24.45■■□□□ 1.5
TRIM3-202ENST00000359518 TSGA10IPQ3SY00 556 aa24.44■■□□□ 1.5
TRIM3-202ENST00000359518 C11orf57Q6ZUT1 292 aaPredicted RBP24.44■■□□□ 1.5
TRIM3-202ENST00000359518 ZNF592Q92610 1267 aa24.44■■□□□ 1.5
TRIM3-202ENST00000359518 GOLIM4O00461 696 aa24.44■■□□□ 1.5
TRIM3-202ENST00000359518 MCMDC2Q4G0Z9 681 aa24.44■■□□□ 1.5
TRIM3-202ENST00000359518 COPRSQ9NQ92 184 aa24.44■■□□□ 1.5
TRIM3-202ENST00000359518 RFX5P48382 616 aaPredicted RBP24.43■■□□□ 1.5
TRIM3-202ENST00000359518 NAA30Q147X3 362 aaPredicted RBP24.43■■□□□ 1.5
TRIM3-202ENST00000359518 TIMM10P62072 90 aa24.43■■□□□ 1.5
TRIM3-202ENST00000359518 PLA2G4DQ86XP0 818 aa24.43■■□□□ 1.5
TRIM3-202ENST00000359518 SLC52A2Q9HAB3 445 aa24.43■■□□□ 1.5
TRIM3-202ENST00000359518 LMO7Q8WWI1 1683 aa24.43■■□□□ 1.5
TRIM3-202ENST00000359518 PDIA4P13667 645 aaKnown RBP24.43■■□□□ 1.5
TRIM3-202ENST00000359518 ALDH8A1Q9H2A2 487 aaPredicted RBP24.43■■□□□ 1.5
TRIM3-202ENST00000359518 PRDM4Q9UKN5 801 aa24.43■■□□□ 1.5
TRIM3-202ENST00000359518 TAOK2Q9UL54 1235 aa24.43■■□□□ 1.5
TRIM3-202ENST00000359518 U3KPZ7 1027 aaPredicted RBP24.43■■□□□ 1.5
TRIM3-202ENST00000359518 U2AF2P26368 475 aaKnown RBP eCLIP24.42■■□□□ 1.5
TRIM3-202ENST00000359518 LMBR1LQ6UX01 489 aa24.42■■□□□ 1.5
TRIM3-202ENST00000359518 CCAR1Q8IX12 1150 aaKnown RBP24.42■■□□□ 1.5
TRIM3-202ENST00000359518 TDRD7Q8NHU6 1098 aaKnown RBP24.42■■□□□ 1.5
TRIM3-202ENST00000359518 ZHX1Q9UKY1 873 aaPredicted RBP24.42■■□□□ 1.5
TRIM3-202ENST00000359518 GOLGA6L19H0YKK7 550 aa24.42■■□□□ 1.5
TRIM3-202ENST00000359518 TNNT1P13805 278 aa24.42■■□□□ 1.5
TRIM3-202ENST00000359518 ANKLE2Q86XL3 938 aa24.42■■□□□ 1.5
TRIM3-202ENST00000359518 RBM43Q6ZSC3 357 aaKnown RBP24.41■■□□□ 1.5
TRIM3-202ENST00000359518 GOLPH3LQ9H4A5 285 aa24.41■■□□□ 1.5
TRIM3-202ENST00000359518 CFAP45Q9UL16 551 aa24.41■■□□□ 1.5
TRIM3-202ENST00000359518 TPD52L1Q16890 204 aaPredicted RBP24.4■■□□□ 1.5
TRIM3-202ENST00000359518 SMAP1Q8IYB5 467 aaPredicted RBP24.4■■□□□ 1.5
TRIM3-202ENST00000359518 USP28Q96RU2 1077 aa24.4■■□□□ 1.5
TRIM3-202ENST00000359518 NCAPD2Q15021 1401 aa24.4■■□□□ 1.5
TRIM3-202ENST00000359518 PTPDC1A2A3K4 754 aa24.4■■□□□ 1.5
TRIM3-202ENST00000359518 FILIP1Q7Z7B0 1213 aa24.4■■□□□ 1.5
TRIM3-202ENST00000359518 TTC5Q8N0Z6 440 aa24.4■■□□□ 1.5
TRIM3-202ENST00000359518 NSUN7Q8NE18 718 aaKnown RBP24.4■■□□□ 1.5
TRIM3-202ENST00000359518 CTDNEP1O95476 244 aa24.39■■□□□ 1.5
TRIM3-202ENST00000359518 ADGRL3Q9HAR2 1447 aa24.38■■□□□ 1.49
TRIM3-202ENST00000359518 CSB-PGBD3P0DP91 1061 aa24.38■■□□□ 1.49
TRIM3-202ENST00000359518 KRT28Q7Z3Y7 464 aa24.38■■□□□ 1.49
TRIM3-202ENST00000359518 HAUS7Q99871 368 aa24.38■■□□□ 1.49
TRIM3-202ENST00000359518 ADD1P35611 737 aaKnown RBP24.38■■□□□ 1.49
TRIM3-202ENST00000359518 ME1P48163 572 aa24.38■■□□□ 1.49
TRIM3-202ENST00000359518 DDX17Q92841 729 aaKnown RBP24.38■■□□□ 1.49
TRIM3-202ENST00000359518 JCADQ9P266 1359 aa24.38■■□□□ 1.49
TRIM3-202ENST00000359518 BECN2A8MW95 431 aa24.37■■□□□ 1.49
TRIM3-202ENST00000359518 OTUD7BQ6GQQ9 843 aa24.37■■□□□ 1.49
TRIM3-202ENST00000359518 ZSCAN16Q9H4T2 348 aaPredicted RBP24.37■■□□□ 1.49
TRIM3-202ENST00000359518 ERBB3P21860 1342 aa24.37■■□□□ 1.49
TRIM3-202ENST00000359518 DHX32Q7L7V1 743 aaKnown RBP24.37■■□□□ 1.49
TRIM3-202ENST00000359518 GPHNQ9NQX3 736 aaPredicted RBP24.37■■□□□ 1.49
TRIM3-202ENST00000359518 TTLL5Q6EMB2 1281 aa24.37■■□□□ 1.49
TRIM3-202ENST00000359518 RAB11FIP4Q86YS3 637 aa24.37■■□□□ 1.49
TRIM3-202ENST00000359518 USP27XA6NNY8 438 aa24.36■■□□□ 1.49
TRIM3-202ENST00000359518 IGSF3O75054 1194 aa24.36■■□□□ 1.49
TRIM3-202ENST00000359518 KBTBD3Q8NAB2 608 aa24.36■■□□□ 1.49
TRIM3-202ENST00000359518 CHD2O14647 1828 aaKnown RBP24.36■■□□□ 1.49
TRIM3-202ENST00000359518 PHKG2P15735 406 aa24.36■■□□□ 1.49
TRIM3-202ENST00000359518 IQCB1Q15051 598 aa24.36■■□□□ 1.49
TRIM3-202ENST00000359518 ZNF594Q96JF6 807 aaPredicted RBP24.36■■□□□ 1.49
TRIM3-202ENST00000359518 USP54Q70EL1 1684 aa24.35■■□□□ 1.49
TRIM3-202ENST00000359518 PFKFB2O60825 505 aa24.35■■□□□ 1.49
TRIM3-202ENST00000359518 SNRPA1P09661 255 aaKnown RBP24.35■■□□□ 1.49
TRIM3-202ENST00000359518 CCDC73Q6ZRK6 1079 aa24.35■■□□□ 1.49
TRIM3-202ENST00000359518 KLHL34Q8N239 644 aa24.35■■□□□ 1.49
TRIM3-202ENST00000359518 TRMT1Q9NXH9 659 aaKnown RBP24.35■■□□□ 1.49
TRIM3-202ENST00000359518 CABLES1Q8TDN4 633 aa24.35■■□□□ 1.49
TRIM3-202ENST00000359518 FSIP1Q8NA03 581 aa24.35■■□□□ 1.49
TRIM3-202ENST00000359518 SMARCC2Q8TAQ2 1214 aa24.35■■□□□ 1.49
TRIM3-202ENST00000359518 PAG1Q9NWQ8 432 aa24.35■■□□□ 1.49
TRIM3-202ENST00000359518 KINO60870 393 aaKnown RBP24.34■■□□□ 1.49
TRIM3-202ENST00000359518 ZSCAN20P17040 1043 aaPredicted RBP24.34■■□□□ 1.49
TRIM3-202ENST00000359518 TATP17735 454 aaPredicted RBP24.34■■□□□ 1.49
TRIM3-202ENST00000359518 KDM6AO15550 1401 aaPredicted RBP24.34■■□□□ 1.49
TRIM3-202ENST00000359518 NCBP1Q09161 790 aaKnown RBP24.34■■□□□ 1.49
TRIM3-202ENST00000359518 CHRNA2Q15822 529 aa24.34■■□□□ 1.49
TRIM3-202ENST00000359518 LRP10Q7Z4F1 713 aa24.34■■□□□ 1.49
TRIM3-202ENST00000359518 HAND2P61296 217 aa24.33■■□□□ 1.49
TRIM3-202ENST00000359518 CTIFO43310 598 aaKnown RBP24.33■■□□□ 1.49
TRIM3-202ENST00000359518 RCOR1Q9UKL0 485 aa24.33■■□□□ 1.49
TRIM3-202ENST00000359518 SNW1Q13573 536 aaKnown RBP24.32■■□□□ 1.48
TRIM3-202ENST00000359518 E7EWF7 191 aa24.32■■□□□ 1.48
TRIM3-202ENST00000359518 STX1AQ16623 288 aa24.32■■□□□ 1.48
TRIM3-202ENST00000359518 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.32■■□□□ 1.48
TRIM3-202ENST00000359518 ANKRD7Q92527 254 aa24.32■■□□□ 1.48
TRIM3-202ENST00000359518 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.32■■□□□ 1.48
TRIM3-202ENST00000359518 V9GYY5 206 aaPredicted RBP24.32■■□□□ 1.48
TRIM3-202ENST00000359518 A0A1B0GVL5 298 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms