RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 CCAR1Q8IX12 1150 aaKnown RBP12.8□□□□□ -0.36
RPE-202ENST00000359429 TRMT1Q9NXH9 659 aaKnown RBP12.8□□□□□ -0.36
RPE-202ENST00000359429 EID1Q9Y6B2 187 aa12.8□□□□□ -0.36
RPE-202ENST00000359429 GOLGA6L19H0YKK7 550 aa12.8□□□□□ -0.36
RPE-202ENST00000359429 SKILP12757 684 aa12.8□□□□□ -0.36
RPE-202ENST00000359429 HSP90B1P14625 803 aaKnown RBP12.8□□□□□ -0.36
RPE-202ENST00000359429 CCZ1BP86790 482 aa12.8□□□□□ -0.36
RPE-202ENST00000359429 CCZ1P86791 482 aaPredicted RBP12.8□□□□□ -0.36
RPE-202ENST00000359429 DHX40Q8IX18 779 aaKnown RBP12.8□□□□□ -0.36
RPE-202ENST00000359429 MRFAP1L1Q96HT8 127 aa12.8□□□□□ -0.36
RPE-202ENST00000359429 CGNQ9P2M7 1197 aaKnown RBP12.8□□□□□ -0.36
RPE-202ENST00000359429 DBNLQ9UJU6 430 aaKnown RBP12.8□□□□□ -0.36
RPE-202ENST00000359429 CTDNEP1O95476 244 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 KMT5BQ4FZB7 885 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 STOX1Q6ZVD7 989 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 KIF18AQ8NI77 898 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 PXDNQ92626 1479 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 HEG1Q9ULI3 1381 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 CCDC69A6NI79 296 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 KCNA6P17658 529 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 PDIA6Q15084 440 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 SLFNL1Q499Z3 407 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 SMARCC2Q8TAQ2 1214 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 FBXW7Q969H0 707 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 USP28Q96RU2 1077 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 CHMP4AQ9BY43 222 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 RCOR1Q9UKL0 485 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 CFAP45Q9UL16 551 aa12.79□□□□□ -0.36
RPE-202ENST00000359429 ZSCAN16Q9H4T2 348 aaPredicted RBP12.78□□□□□ -0.36
RPE-202ENST00000359429 MORC2Q9Y6X9 1032 aaPredicted RBP12.78□□□□□ -0.36
RPE-202ENST00000359429 ERBB3P21860 1342 aa12.78□□□□□ -0.36
RPE-202ENST00000359429 ZNF609O15014 1411 aa12.78□□□□□ -0.36
RPE-202ENST00000359429 A0A0G2JLW4 131 aa12.78□□□□□ -0.36
RPE-202ENST00000359429 SLFN14P0C7P3 912 aa12.78□□□□□ -0.36
RPE-202ENST00000359429 PTPN14Q15678 1187 aa12.78□□□□□ -0.36
RPE-202ENST00000359429 STX1AQ16623 288 aa12.78□□□□□ -0.36
RPE-202ENST00000359429 NSUN7Q8NE18 718 aaKnown RBP12.78□□□□□ -0.36
RPE-202ENST00000359429 ENGASEQ8NFI3 743 aa12.78□□□□□ -0.36
RPE-202ENST00000359429 CAVIN2O95810 425 aa12.77□□□□□ -0.36
RPE-202ENST00000359429 KRT32Q14532 448 aa12.77□□□□□ -0.36
RPE-202ENST00000359429 BECN2A8MW95 431 aa12.77□□□□□ -0.37
RPE-202ENST00000359429 PLEKHO1Q53GL0 409 aaPredicted RBP12.77□□□□□ -0.37
RPE-202ENST00000359429 ZNF771Q7L3S4 317 aaPredicted RBP12.77□□□□□ -0.37
RPE-202ENST00000359429 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
RPE-202ENST00000359429 DNAJC2Q99543 621 aaKnown RBP12.77□□□□□ -0.37
RPE-202ENST00000359429 HDAC5Q9UQL6 1122 aa12.77□□□□□ -0.37
RPE-202ENST00000359429 ATP5JP18859 108 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 CCT2P78371 535 aaKnown RBP12.76□□□□□ -0.37
RPE-202ENST00000359429 GUCY1B3Q02153 619 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 APOBRQ0VD83 1088 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 TFCP2Q12800 502 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 NBPF11Q86T75 865 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 CCAR2Q8N163 923 aaKnown RBP12.76□□□□□ -0.37
RPE-202ENST00000359429 SYTL4Q96C24 671 aaPredicted RBP12.76□□□□□ -0.37
RPE-202ENST00000359429 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
RPE-202ENST00000359429 NCOA5Q9HCD5 579 aaKnown RBP12.76□□□□□ -0.37
RPE-202ENST00000359429 NEURL1BA8MQ27 555 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 PFKFB2O60825 505 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 ELF2Q15723 593 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 FBXO38Q6PIJ6 1188 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 DDX46Q7L014 1031 aaKnown RBP12.76□□□□□ -0.37
RPE-202ENST00000359429 RIC3Q7Z5B4 369 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 AOPEPQ8N6M6 819 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 DDX21Q9NR30 783 aaKnown RBP eCLIP12.76□□□□□ -0.37
RPE-202ENST00000359429 PTPDC1A2A3K4 754 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 MYL6BP14649 208 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 TNNI3KQ59H18 835 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 DBNDD2Q9BQY9 259 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 CCDC9Q9Y3X0 531 aaKnown RBP12.76□□□□□ -0.37
RPE-202ENST00000359429 FPGT-TNNI3KV9GXZ4 949 aa12.76□□□□□ -0.37
RPE-202ENST00000359429 ANKARQ7Z5J8 1434 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 SETD1BQ9UPS6 1966 aaKnown RBP12.75□□□□□ -0.37
RPE-202ENST00000359429 CTAGE5O15320 804 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 RFX5P48382 616 aaPredicted RBP12.75□□□□□ -0.37
RPE-202ENST00000359429 PTPN12Q05209 780 aaKnown RBP12.75□□□□□ -0.37
RPE-202ENST00000359429 SLC39A6Q13433 755 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 GCKRQ14397 625 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 C1orf141Q5JVX7 400 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 SLIT1O75093 1534 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 NPHP1O15259 732 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 NEMFO60524 1076 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 DDX58O95786 925 aaKnown RBP12.75□□□□□ -0.37
RPE-202ENST00000359429 FGD1P98174 961 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 MCMDC2Q4G0Z9 681 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 NAA16Q6N069 864 aaPredicted RBP12.75□□□□□ -0.37
RPE-202ENST00000359429 FSIP1Q8NA03 581 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 LRRN4CLQ8ND94 238 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 ZNF397Q8NF99 534 aaPredicted RBP12.75□□□□□ -0.37
RPE-202ENST00000359429 MYD88Q99836 296 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 ST7Q9NRC1 585 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
RPE-202ENST00000359429 KINO60870 393 aaKnown RBP12.74□□□□□ -0.37
RPE-202ENST00000359429 PIP4K2AP48426 406 aaPredicted RBP12.74□□□□□ -0.37
RPE-202ENST00000359429 FAM160A1Q05DH4 1040 aa12.74□□□□□ -0.37
RPE-202ENST00000359429 GABPB1Q06547 395 aaPredicted RBP12.74□□□□□ -0.37
RPE-202ENST00000359429 CCDC73Q6ZRK6 1079 aa12.74□□□□□ -0.37
RPE-202ENST00000359429 CHST3Q7LGC8 479 aa12.74□□□□□ -0.37
RPE-202ENST00000359429 ANO10Q9NW15 660 aa12.74□□□□□ -0.37
RPE-202ENST00000359429 NFAT5O94916 1531 aa12.74□□□□□ -0.37
RPE-202ENST00000359429 MRC1P22897 1456 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms