RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 DPF2Q92785 391 aa18.64■□□□□ 0.57
PRPF40A-201ENST00000354363 GPR101Q96P66 508 aaPredicted RBP18.64■□□□□ 0.57
PRPF40A-201ENST00000354363 CELF2O95319 508 aaKnown RBP18.63■□□□□ 0.57
PRPF40A-201ENST00000354363 DOK7Q18PE1 504 aa18.63■□□□□ 0.57
PRPF40A-201ENST00000354363 CCDC152Q4G0S7 254 aa18.63■□□□□ 0.57
PRPF40A-201ENST00000354363 CYP4F22Q6NT55 531 aa18.63■□□□□ 0.57
PRPF40A-201ENST00000354363 TSR2Q969E8 191 aaKnown RBP18.63■□□□□ 0.57
PRPF40A-201ENST00000354363 KCNQ5Q9NR82 932 aa18.63■□□□□ 0.57
PRPF40A-201ENST00000354363 PODXL2Q9NZ53 605 aa18.63■□□□□ 0.57
PRPF40A-201ENST00000354363 MAP3K2Q9Y2U5 619 aa18.63■□□□□ 0.57
PRPF40A-201ENST00000354363 RTL9Q8NET4 1388 aa18.63■□□□□ 0.57
PRPF40A-201ENST00000354363 LBX1P52954 281 aa18.63■□□□□ 0.57
PRPF40A-201ENST00000354363 CCDC27Q2M243 656 aa18.63■□□□□ 0.57
PRPF40A-201ENST00000354363 HSPA8P11142 646 aaKnown RBP18.62■□□□□ 0.57
PRPF40A-201ENST00000354363 KSR2Q6VAB6 950 aa18.62■□□□□ 0.57
PRPF40A-201ENST00000354363 CDC37L1Q7L3B6 337 aa18.62■□□□□ 0.57
PRPF40A-201ENST00000354363 CCDC85AQ96PX6 553 aaPredicted RBP18.62■□□□□ 0.57
PRPF40A-201ENST00000354363 GRM1Q13255 1194 aa18.61■□□□□ 0.57
PRPF40A-201ENST00000354363 SAMD7Q7Z3H4 446 aa18.61■□□□□ 0.57
PRPF40A-201ENST00000354363 SAPCD2Q86UD0 394 aa18.61■□□□□ 0.57
PRPF40A-201ENST00000354363 WWC1Q8IX03 1113 aa18.61■□□□□ 0.57
PRPF40A-201ENST00000354363 ZC3H12CQ9C0D7 883 aaKnown RBP18.61■□□□□ 0.57
PRPF40A-201ENST00000354363 ANKIB1Q9P2G1 1089 aa18.61■□□□□ 0.57
PRPF40A-201ENST00000354363 PI4KAP2A4QPH2 592 aa18.6■□□□□ 0.57
PRPF40A-201ENST00000354363 UFL1O94874 794 aa18.6■□□□□ 0.57
PRPF40A-201ENST00000354363 IGKV5-2P06315 115 aa18.6■□□□□ 0.57
PRPF40A-201ENST00000354363 RPS12P25398 132 aaKnown RBP18.6■□□□□ 0.57
PRPF40A-201ENST00000354363 PI4KAP1Q8N8J0 262 aa18.6■□□□□ 0.57
PRPF40A-201ENST00000354363 GGA1Q9UJY5 639 aa18.6■□□□□ 0.57
PRPF40A-201ENST00000354363 STK31Q9BXU1 1019 aa18.6■□□□□ 0.57
PRPF40A-201ENST00000354363 ZNF408Q9H9D4 720 aa18.6■□□□□ 0.57
PRPF40A-201ENST00000354363 EGFRP00533 1210 aa18.59■□□□□ 0.57
PRPF40A-201ENST00000354363 TBC1D10BQ4KMP7 808 aaPredicted RBP18.59■□□□□ 0.57
PRPF40A-201ENST00000354363 USP48Q86UV5 1035 aa18.59■□□□□ 0.57
PRPF40A-201ENST00000354363 ANKRD18AQ8IVF6 992 aa18.59■□□□□ 0.57
PRPF40A-201ENST00000354363 AOC2O75106 756 aa18.58■□□□□ 0.56
PRPF40A-201ENST00000354363 VIL1P09327 827 aaKnown RBP18.58■□□□□ 0.56
PRPF40A-201ENST00000354363 CTSWP56202 376 aa18.58■□□□□ 0.56
PRPF40A-201ENST00000354363 TWISTNBQ3B726 338 aaPredicted RBP18.58■□□□□ 0.56
PRPF40A-201ENST00000354363 HHIPL1Q96JK4 782 aa18.58■□□□□ 0.56
PRPF40A-201ENST00000354363 G2E3Q7L622 706 aa18.57■□□□□ 0.56
PRPF40A-201ENST00000354363 XDHP47989 1333 aa18.57■□□□□ 0.56
PRPF40A-201ENST00000354363 IL16Q14005 1332 aa18.57■□□□□ 0.56
PRPF40A-201ENST00000354363 G3V3G9 751 aa18.56■□□□□ 0.56
PRPF40A-201ENST00000354363 MAP2K2P36507 400 aa18.56■□□□□ 0.56
PRPF40A-201ENST00000354363 NEXNQ0ZGT2 675 aa18.56■□□□□ 0.56
PRPF40A-201ENST00000354363 CWF19L2Q2TBE0 894 aaKnown RBP18.56■□□□□ 0.56
PRPF40A-201ENST00000354363 RBM26Q5T8P6 1007 aaKnown RBP18.56■□□□□ 0.56
PRPF40A-201ENST00000354363 DCAF8Q5TAQ9 597 aa18.56■□□□□ 0.56
PRPF40A-201ENST00000354363 DLK2Q6UY11 383 aa18.56■□□□□ 0.56
PRPF40A-201ENST00000354363 TTLL11Q8NHH1 800 aa18.56■□□□□ 0.56
PRPF40A-201ENST00000354363 NEURL1BA8MQ27 555 aa18.56■□□□□ 0.56
PRPF40A-201ENST00000354363 NCBP3Q53F19 620 aaKnown RBP18.56■□□□□ 0.56
PRPF40A-201ENST00000354363 CDC5LQ99459 802 aaKnown RBP18.56■□□□□ 0.56
PRPF40A-201ENST00000354363 BEGAINQ9BUH8 593 aa18.56■□□□□ 0.56
PRPF40A-201ENST00000354363 ZNF646O15015 1829 aaPredicted RBP18.55■□□□□ 0.56
PRPF40A-201ENST00000354363 SLC4A2P04920 1241 aa18.55■□□□□ 0.56
PRPF40A-201ENST00000354363 ATP2B4P23634 1241 aa18.55■□□□□ 0.56
PRPF40A-201ENST00000354363 KIF4BQ2VIQ3 1234 aa18.55■□□□□ 0.56
PRPF40A-201ENST00000354363 KRT26Q7Z3Y9 468 aa18.55■□□□□ 0.56
PRPF40A-201ENST00000354363 ZNF609O15014 1411 aa18.55■□□□□ 0.56
PRPF40A-201ENST00000354363 CASP8AP2Q9UKL3 1982 aa18.54■□□□□ 0.56
PRPF40A-201ENST00000354363 DCPSQ96C86 337 aaKnown RBP18.54■□□□□ 0.56
PRPF40A-201ENST00000354363 GREM2Q9H772 168 aa18.54■□□□□ 0.56
PRPF40A-201ENST00000354363 MRS2Q9HD23 443 aa18.54■□□□□ 0.56
PRPF40A-201ENST00000354363 H7C1W4 665 aa18.53■□□□□ 0.56
PRPF40A-201ENST00000354363 RSBN1LQ6PCB5 846 aaPredicted RBP18.53■□□□□ 0.56
PRPF40A-201ENST00000354363 ADM5C9JUS6 153 aa18.52■□□□□ 0.56
PRPF40A-201ENST00000354363 UBE3BQ7Z3V4 1068 aa18.52■□□□□ 0.56
PRPF40A-201ENST00000354363 AGBL3Q8NEM8 1001 aa18.52■□□□□ 0.56
PRPF40A-201ENST00000354363 BSDC1Q9NW68 430 aaPredicted RBP18.52■□□□□ 0.56
PRPF40A-201ENST00000354363 MINPP1Q9UNW1 487 aa18.52■□□□□ 0.56
PRPF40A-201ENST00000354363 FANCIQ9NVI1 1328 aa18.52■□□□□ 0.56
PRPF40A-201ENST00000354363 WTIPA6NIX2 430 aaPredicted RBP18.52■□□□□ 0.55
PRPF40A-201ENST00000354363 HUNKP57058 714 aa18.52■□□□□ 0.55
PRPF40A-201ENST00000354363 FLIIQ13045 1269 aa18.52■□□□□ 0.55
PRPF40A-201ENST00000354363 ASTN2O75129 1339 aaPredicted RBP18.51■□□□□ 0.55
PRPF40A-201ENST00000354363 ZNF280AP59817 542 aaPredicted RBP18.51■□□□□ 0.55
PRPF40A-201ENST00000354363 GMLQ99445 158 aa18.51■□□□□ 0.55
PRPF40A-201ENST00000354363 GBA2Q9HCG7 927 aaPredicted RBP18.51■□□□□ 0.55
PRPF40A-201ENST00000354363 GGA3Q9NZ52 723 aa18.51■□□□□ 0.55
PRPF40A-201ENST00000354363 TSKSQ9UJT2 592 aa18.51■□□□□ 0.55
PRPF40A-201ENST00000354363 MED23Q9ULK4 1368 aa18.5■□□□□ 0.55
PRPF40A-201ENST00000354363 BRPF1P55201 1214 aaPredicted RBP18.5■□□□□ 0.55
PRPF40A-201ENST00000354363 GCKRQ14397 625 aa18.5■□□□□ 0.55
PRPF40A-201ENST00000354363 PODNQ7Z5L7 613 aa18.5■□□□□ 0.55
PRPF40A-201ENST00000354363 PLA2G12BQ9BX93 195 aa18.5■□□□□ 0.55
PRPF40A-201ENST00000354363 SALL2Q9Y467 1007 aaPredicted RBP18.5■□□□□ 0.55
PRPF40A-201ENST00000354363 AKAP11Q9UKA4 1901 aa18.5■□□□□ 0.55
PRPF40A-201ENST00000354363 USP17L3A6NCW0 530 aa18.49■□□□□ 0.55
PRPF40A-201ENST00000354363 USP17L4A6NCW7 530 aa18.49■□□□□ 0.55
PRPF40A-201ENST00000354363 ANP32CO43423 234 aa18.49■□□□□ 0.55
PRPF40A-201ENST00000354363 VAMP4O75379 141 aa18.49■□□□□ 0.55
PRPF40A-201ENST00000354363 CCT4P50991 539 aaKnown RBP18.49■□□□□ 0.55
PRPF40A-201ENST00000354363 CASP7P55210 303 aa18.49■□□□□ 0.55
PRPF40A-201ENST00000354363 USP17L1Q7RTZ2 530 aa18.49■□□□□ 0.55
PRPF40A-201ENST00000354363 WDR63Q8IWG1 891 aa18.49■□□□□ 0.55
PRPF40A-201ENST00000354363 DNAAF4Q8WXU2 420 aa18.49■□□□□ 0.55
PRPF40A-201ENST00000354363 ZIC5Q96T25 663 aa18.49■□□□□ 0.55
PRPF40A-201ENST00000354363 CA12O43570 354 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms