RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 CCDC171Q6TFL3 1326 aa9.99□□□□□ -0.81
FGD6-201ENST00000343958 TAF3Q5VWG9 929 aa9.99□□□□□ -0.81
FGD6-201ENST00000343958 CACNA2D4Q7Z3S7 1137 aa9.99□□□□□ -0.81
FGD6-201ENST00000343958 CDC5LQ99459 802 aaKnown RBP9.99□□□□□ -0.81
FGD6-201ENST00000343958 YEATS4O95619 227 aa9.99□□□□□ -0.81
FGD6-201ENST00000343958 IDEP14735 1019 aa9.99□□□□□ -0.81
FGD6-201ENST00000343958 UBASH3AP57075 661 aa9.99□□□□□ -0.81
FGD6-201ENST00000343958 MYO6Q9UM54 1294 aa9.99□□□□□ -0.81
FGD6-201ENST00000343958 RPGRQ92834 1020 aaKnown RBP9.99□□□□□ -0.81
FGD6-201ENST00000343958 CHAMP1Q96JM3 812 aa9.99□□□□□ -0.81
FGD6-201ENST00000343958 TRMT1LQ7Z2T5 733 aaKnown RBP9.99□□□□□ -0.81
FGD6-201ENST00000343958 LUC7LQ9NQ29 371 aaKnown RBP9.99□□□□□ -0.81
FGD6-201ENST00000343958 IRS4O14654 1257 aaPredicted RBP9.98□□□□□ -0.81
FGD6-201ENST00000343958 ATP6V1AP38606 617 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 RTN1Q16799 776 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 TDRD12Q587J7 1177 aaKnown RBP9.98□□□□□ -0.81
FGD6-201ENST00000343958 ITSN2Q9NZM3 1697 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 ZFYP08048 801 aaPredicted RBP9.98□□□□□ -0.81
FGD6-201ENST00000343958 GNG11P61952 73 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 DZIP3Q86Y13 1208 aaKnown RBP9.98□□□□□ -0.81
FGD6-201ENST00000343958 ORAI2Q96SN7 254 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 RPS6KB1P23443 525 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 CCDC152Q4G0S7 254 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 TNNI3KQ59H18 835 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.98□□□□□ -0.816e-7■■■■■ 76.9
FGD6-201ENST00000343958 FPGT-TNNI3KV9GXZ4 949 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 KDM6BO15054 1643 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 LIG1P18858 919 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 MAPK8IP2Q13387 824 aaPredicted RBP9.98□□□□□ -0.81
FGD6-201ENST00000343958 DDX17Q92841 729 aaKnown RBP9.98□□□□□ -0.81
FGD6-201ENST00000343958 DDX21Q9NR30 783 aaKnown RBP eCLIP9.98□□□□□ -0.81
FGD6-201ENST00000343958 RTL1A6NKG5 1358 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 CCDC150Q8NCX0 1101 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 CCDC12Q8WUD4 166 aaPredicted RBP9.98□□□□□ -0.81
FGD6-201ENST00000343958 STX17P56962 302 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 ANKRD18AQ8IVF6 992 aa9.98□□□□□ -0.81
FGD6-201ENST00000343958 SPTLC2O15270 562 aa9.97□□□□□ -0.81
FGD6-201ENST00000343958 SIRT1Q96EB6 747 aa9.97□□□□□ -0.81
FGD6-201ENST00000343958 JAG2Q9Y219 1238 aa9.97□□□□□ -0.81
FGD6-201ENST00000343958 NIP7Q9Y221 180 aaKnown RBP eCLIP9.97□□□□□ -0.81
FGD6-201ENST00000343958 TAX1BP1Q86VP1 789 aa9.97□□□□□ -0.81
FGD6-201ENST00000343958 C17orf53Q8N3J3 647 aaPredicted RBP9.97□□□□□ -0.81
FGD6-201ENST00000343958 EDC3Q96F86 508 aaKnown RBP9.97□□□□□ -0.81
FGD6-201ENST00000343958 PLEKHF1Q96S99 279 aa9.97□□□□□ -0.81
FGD6-201ENST00000343958 ERLIN2O94905 339 aa9.97□□□□□ -0.81
FGD6-201ENST00000343958 MATR3P43243 847 aaKnown RBP eCLIP9.97□□□□□ -0.81
FGD6-201ENST00000343958 INTS4Q96HW7 963 aaKnown RBP9.97□□□□□ -0.81
FGD6-201ENST00000343958 NCOA5Q9HCD5 579 aaKnown RBP9.97□□□□□ -0.81
FGD6-201ENST00000343958 F8W031 263 aaPredicted RBP9.97□□□□□ -0.81
FGD6-201ENST00000343958 MAGEB6Q8N7X4 407 aa9.97□□□□□ -0.81
FGD6-201ENST00000343958 KRT23Q9C075 422 aa9.97□□□□□ -0.81
FGD6-201ENST00000343958 DNAI1Q9UI46 699 aa9.97□□□□□ -0.81
FGD6-201ENST00000343958 GOLGA6L10A6NI86 522 aa9.97□□□□□ -0.81
FGD6-201ENST00000343958 TRMT2AQ8IZ69 625 aaKnown RBP9.97□□□□□ -0.81
FGD6-201ENST00000343958 DHX32Q7L7V1 743 aaKnown RBP9.97□□□□□ -0.81
FGD6-201ENST00000343958 RNF216Q9NWF9 866 aaPredicted RBP9.97□□□□□ -0.81
FGD6-201ENST00000343958 LMBRD1Q9NUN5 540 aa9.97□□□□□ -0.81
FGD6-201ENST00000343958 ZHX1Q9UKY1 873 aaPredicted RBP9.97□□□□□ -0.81
FGD6-201ENST00000343958 PALD1Q9ULE6 856 aa9.97□□□□□ -0.81
FGD6-201ENST00000343958 LMOD1P29536 600 aaPredicted RBP9.96□□□□□ -0.81
FGD6-201ENST00000343958 CCDC178Q5BJE1 867 aa9.96□□□□□ -0.81
FGD6-201ENST00000343958 IFIT1BQ5T764 474 aaKnown RBP9.96□□□□□ -0.81
FGD6-201ENST00000343958 JAKMIP3Q5VZ66 844 aa9.96□□□□□ -0.81
FGD6-201ENST00000343958 UTP14AQ9BVJ6 771 aaKnown RBP9.96□□□□□ -0.81
FGD6-201ENST00000343958 ZNF287Q9HBT7 754 aa9.96□□□□□ -0.81
FGD6-201ENST00000343958 A1BGP04217 495 aa9.96□□□□□ -0.81
FGD6-201ENST00000343958 EIF4A1P60842 406 aaKnown RBP9.96□□□□□ -0.81
FGD6-201ENST00000343958 KCNG4Q8TDN1 519 aa9.96□□□□□ -0.81
FGD6-201ENST00000343958 NGLY1Q96IV0 654 aa9.96□□□□□ -0.81
FGD6-201ENST00000343958 EDC4Q6P2E9 1401 aaKnown RBP9.96□□□□□ -0.81
FGD6-201ENST00000343958 TMEM266Q2M3C6 531 aa9.96□□□□□ -0.81
FGD6-201ENST00000343958 PRIMPOLQ96LW4 560 aa9.96□□□□□ -0.81
FGD6-201ENST00000343958 CRNKL1Q9BZJ0 848 aaKnown RBP9.96□□□□□ -0.81
FGD6-201ENST00000343958 CCDC40Q4G0X9 1142 aa9.96□□□□□ -0.81
FGD6-201ENST00000343958 TXLNBQ8N3L3 684 aa9.96□□□□□ -0.81
FGD6-201ENST00000343958 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.96□□□□□ -0.81
FGD6-201ENST00000343958 MAGEB6P1A0A0J9YX57 407 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 N4BP3O15049 544 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 GTF2F1P35269 517 aaKnown RBP eCLIP9.96□□□□□ -0.82
FGD6-201ENST00000343958 HSPA2P54652 639 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 SPTY2D1Q68D10 685 aaPredicted RBP9.96□□□□□ -0.82
FGD6-201ENST00000343958 PLIN2Q99541 437 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 RAD50Q92878 1312 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 A0A1B0GVL5 298 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 SGSM2O43147 1006 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 SSR1P43307 286 aaKnown RBP9.96□□□□□ -0.82
FGD6-201ENST00000343958 DYNC1I1O14576 645 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 IL2RBP14784 551 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 CADPS2Q86UW7 1296 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 FAM89AQ96GI7 184 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 SBNO1A3KN83 1393 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 KARSQ15046 597 aaKnown RBP9.96□□□□□ -0.82
FGD6-201ENST00000343958 HEATR3Q7Z4Q2 680 aa9.96□□□□□ -0.82
FGD6-201ENST00000343958 MAST1Q9Y2H9 1570 aa9.95□□□□□ -0.82
FGD6-201ENST00000343958 ABCC4O15439 1325 aa9.95□□□□□ -0.82
FGD6-201ENST00000343958 PDE4BQ07343 736 aa9.95□□□□□ -0.82
FGD6-201ENST00000343958 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
FGD6-201ENST00000343958 TBX22Q9Y458 520 aa9.95□□□□□ -0.82
FGD6-201ENST00000343958 NAA16Q6N069 864 aaPredicted RBP9.95□□□□□ -0.82
FGD6-201ENST00000343958 TRIM47Q96LD4 638 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms