RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 TNNI3KQ59H18 835 aa24.81■■□□□ 1.56
E2F1-201ENST00000343380 IFFO2Q5TF58 517 aa24.81■■□□□ 1.56
E2F1-201ENST00000343380 FPGT-TNNI3KV9GXZ4 949 aa24.81■■□□□ 1.56
E2F1-201ENST00000343380 RFX5P48382 616 aaPredicted RBP24.8■■□□□ 1.56
E2F1-201ENST00000343380 PTPN12Q05209 780 aaKnown RBP24.8■■□□□ 1.56
E2F1-201ENST00000343380 NCBP1Q09161 790 aaKnown RBP24.8■■□□□ 1.56
E2F1-201ENST00000343380 CCDC9Q9Y3X0 531 aaKnown RBP24.8■■□□□ 1.56
E2F1-201ENST00000343380 IQCB1Q15051 598 aa24.8■■□□□ 1.56
E2F1-201ENST00000343380 DBNDD2Q9BQY9 259 aa24.8■■□□□ 1.56
E2F1-201ENST00000343380 MRC1P22897 1456 aa24.8■■□□□ 1.56
E2F1-201ENST00000343380 KRT32Q14532 448 aa24.79■■□□□ 1.56
E2F1-201ENST00000343380 DDX46Q7L014 1031 aaKnown RBP24.79■■□□□ 1.56
E2F1-201ENST00000343380 TNNT1P13805 278 aa24.79■■□□□ 1.56
E2F1-201ENST00000343380 GOLPH3LQ9H4A5 285 aa24.79■■□□□ 1.56
E2F1-201ENST00000343380 LMOD2Q6P5Q4 547 aa24.78■■□□□ 1.56
E2F1-201ENST00000343380 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.78■■□□□ 1.56
E2F1-201ENST00000343380 BCL11BQ9C0K0 894 aaPredicted RBP24.78■■□□□ 1.56
E2F1-201ENST00000343380 USP16Q9Y5T5 823 aa24.78■■□□□ 1.56
E2F1-201ENST00000343380 NEXNQ0ZGT2 675 aa24.78■■□□□ 1.56
E2F1-201ENST00000343380 ZNF790Q6PG37 636 aa24.78■■□□□ 1.56
E2F1-201ENST00000343380 COPRSQ9NQ92 184 aa24.78■■□□□ 1.56
E2F1-201ENST00000343380 A0A0G2JLW4 131 aa24.77■■□□□ 1.56
E2F1-201ENST00000343380 CTDNEP1O95476 244 aa24.77■■□□□ 1.56
E2F1-201ENST00000343380 OVOS2A0A0G2JMS6 1433 aa24.77■■□□□ 1.56
E2F1-201ENST00000343380 METTL22Q9BUU2 404 aaPredicted RBP24.77■■□□□ 1.56
E2F1-201ENST00000343380 ORAI2Q96SN7 254 aa24.76■■□□□ 1.55
E2F1-201ENST00000343380 USP27XA6NNY8 438 aa24.76■■□□□ 1.55
E2F1-201ENST00000343380 NSUN7Q8NE18 718 aaKnown RBP24.76■■□□□ 1.55
E2F1-201ENST00000343380 SMARCC2Q8TAQ2 1214 aa24.76■■□□□ 1.55
E2F1-201ENST00000343380 U3KPZ7 1027 aaPredicted RBP24.76■■□□□ 1.55
E2F1-201ENST00000343380 UBE3BQ7Z3V4 1068 aa24.75■■□□□ 1.55
E2F1-201ENST00000343380 ERCC4Q92889 916 aaPredicted RBP24.75■■□□□ 1.55
E2F1-201ENST00000343380 ZSCAN16Q9H4T2 348 aaPredicted RBP24.75■■□□□ 1.55
E2F1-201ENST00000343380 MCMDC2Q4G0Z9 681 aa24.75■■□□□ 1.55
E2F1-201ENST00000343380 CCAR1Q8IX12 1150 aaKnown RBP24.75■■□□□ 1.55
E2F1-201ENST00000343380 CFAP45Q9UL16 551 aa24.75■■□□□ 1.55
E2F1-201ENST00000343380 SMTNL1A8MU46 457 aa24.74■■□□□ 1.55
E2F1-201ENST00000343380 APOBRQ0VD83 1088 aa24.74■■□□□ 1.55
E2F1-201ENST00000343380 SNW1Q13573 536 aaKnown RBP24.74■■□□□ 1.55
E2F1-201ENST00000343380 NFATC2IPQ8NCF5 419 aa24.74■■□□□ 1.55
E2F1-201ENST00000343380 TPD52L1Q16890 204 aaPredicted RBP24.74■■□□□ 1.55
E2F1-201ENST00000343380 USP28Q96RU2 1077 aa24.74■■□□□ 1.55
E2F1-201ENST00000343380 NCOA5Q9HCD5 579 aaKnown RBP24.74■■□□□ 1.55
E2F1-201ENST00000343380 SIPA1L3O60292 1781 aaPredicted RBP24.74■■□□□ 1.55
E2F1-201ENST00000343380 ATP5J2-PTCD1G3V325 749 aa24.73■■□□□ 1.55
E2F1-201ENST00000343380 PTCD1O75127 700 aaKnown RBP24.73■■□□□ 1.55
E2F1-201ENST00000343380 CCT2P78371 535 aaKnown RBP24.73■■□□□ 1.55
E2F1-201ENST00000343380 FGD1P98174 961 aa24.73■■□□□ 1.55
E2F1-201ENST00000343380 UTP14CQ5TAP6 766 aaKnown RBP24.73■■□□□ 1.55
E2F1-201ENST00000343380 LRP10Q7Z4F1 713 aa24.73■■□□□ 1.55
E2F1-201ENST00000343380 LRRC8AQ8IWT6 810 aa24.73■■□□□ 1.55
E2F1-201ENST00000343380 ZNF496Q96IT1 587 aaPredicted RBP24.73■■□□□ 1.55
E2F1-201ENST00000343380 PFKFB2O60825 505 aa24.73■■□□□ 1.55
E2F1-201ENST00000343380 HAUS7Q99871 368 aa24.73■■□□□ 1.55
E2F1-201ENST00000343380 RCOR1Q9UKL0 485 aa24.73■■□□□ 1.55
E2F1-201ENST00000343380 GUCY1B3Q02153 619 aa24.72■■□□□ 1.55
E2F1-201ENST00000343380 ANKRD13DQ6ZTN6 518 aa24.72■■□□□ 1.55
E2F1-201ENST00000343380 PHRF1Q9P1Y6 1649 aaKnown RBP24.72■■□□□ 1.55
E2F1-201ENST00000343380 PTPDC1A2A3K4 754 aa24.72■■□□□ 1.55
E2F1-201ENST00000343380 GOLGA6L19H0YKK7 550 aa24.71■■□□□ 1.55
E2F1-201ENST00000343380 CDC25BP30305 580 aa24.71■■□□□ 1.55
E2F1-201ENST00000343380 ZNF592Q92610 1267 aa24.71■■□□□ 1.55
E2F1-201ENST00000343380 C5P01031 1676 aa24.71■■□□□ 1.55
E2F1-201ENST00000343380 SARM1Q6SZW1 724 aa24.71■■□□□ 1.55
E2F1-201ENST00000343380 ILDR1Q86SU0 546 aaPredicted RBP24.71■■□□□ 1.55
E2F1-201ENST00000343380 FBXW7Q969H0 707 aa24.71■■□□□ 1.55
E2F1-201ENST00000343380 CHST3Q7LGC8 479 aa24.7■■□□□ 1.54
E2F1-201ENST00000343380 DHX40Q8IX18 779 aaKnown RBP24.7■■□□□ 1.54
E2F1-201ENST00000343380 SLC52A2Q9HAB3 445 aa24.7■■□□□ 1.54
E2F1-201ENST00000343380 DHX32Q7L7V1 743 aaKnown RBP24.7■■□□□ 1.54
E2F1-201ENST00000343380 IGSF3O75054 1194 aa24.69■■□□□ 1.54
E2F1-201ENST00000343380 STX1AQ16623 288 aa24.69■■□□□ 1.54
E2F1-201ENST00000343380 RABL6Q3YEC7 729 aaPredicted RBP24.69■■□□□ 1.54
E2F1-201ENST00000343380 NAA16Q6N069 864 aaPredicted RBP24.69■■□□□ 1.54
E2F1-201ENST00000343380 ENGASEQ8NFI3 743 aa24.69■■□□□ 1.54
E2F1-201ENST00000343380 KDM6AO15550 1401 aaPredicted RBP24.69■■□□□ 1.54
E2F1-201ENST00000343380 CCDC112Q8NEF3 446 aa24.69■■□□□ 1.54
E2F1-201ENST00000343380 CAVIN2O95810 425 aa24.68■■□□□ 1.54
E2F1-201ENST00000343380 FILIP1Q7Z7B0 1213 aa24.68■■□□□ 1.54
E2F1-201ENST00000343380 KBTBD3Q8NAB2 608 aa24.68■■□□□ 1.54
E2F1-201ENST00000343380 MRFAP1L1Q96HT8 127 aa24.68■■□□□ 1.54
E2F1-201ENST00000343380 LLPHQ9BRT6 129 aaKnown RBP24.68■■□□□ 1.54
E2F1-201ENST00000343380 GOLIM4O00461 696 aa24.68■■□□□ 1.54
E2F1-201ENST00000343380 CEP135Q66GS9 1140 aa24.68■■□□□ 1.54
E2F1-201ENST00000343380 NAP1L2Q9ULW6 460 aaPredicted RBP24.68■■□□□ 1.54
E2F1-201ENST00000343380 A0A087WZG4 1122 aa24.67■■□□□ 1.54
E2F1-201ENST00000343380 EXOSC10Q01780 885 aaKnown RBP24.67■■□□□ 1.54
E2F1-201ENST00000343380 SKILP12757 684 aa24.67■■□□□ 1.54
E2F1-201ENST00000343380 CTNNA3Q9UI47 895 aa24.67■■□□□ 1.54
E2F1-201ENST00000343380 PAXBP1Q9Y5B6 917 aa24.67■■□□□ 1.54
E2F1-201ENST00000343380 RBM6P78332 1123 aaKnown RBP24.66■■□□□ 1.54
E2F1-201ENST00000343380 ZC3H6P61129 1189 aaKnown RBP24.66■■□□□ 1.54
E2F1-201ENST00000343380 LMBR1LQ6UX01 489 aa24.66■■□□□ 1.54
E2F1-201ENST00000343380 CCDC73Q6ZRK6 1079 aa24.66■■□□□ 1.54
E2F1-201ENST00000343380 TRMT1Q9NXH9 659 aaKnown RBP24.66■■□□□ 1.54
E2F1-201ENST00000343380 ME1P48163 572 aa24.65■■□□□ 1.54
E2F1-201ENST00000343380 TIMM10P62072 90 aa24.65■■□□□ 1.54
E2F1-201ENST00000343380 CCZ1BP86790 482 aa24.65■■□□□ 1.54
E2F1-201ENST00000343380 CCZ1P86791 482 aaPredicted RBP24.65■■□□□ 1.54
E2F1-201ENST00000343380 FSIP1Q8NA03 581 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms