RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 PLBD2Q8NHP8 589 aa22.25■■□□□ 1.15
SH2B3-201ENST00000341259 SBNO2Q9Y2G9 1366 aa22.25■■□□□ 1.15
SH2B3-201ENST00000341259 NEMFO60524 1076 aa22.25■■□□□ 1.15
SH2B3-201ENST00000341259 ISM2Q6H9L7 571 aa22.25■■□□□ 1.15
SH2B3-201ENST00000341259 TMC6Q7Z403 805 aa22.25■■□□□ 1.15
SH2B3-201ENST00000341259 CAVIN2O95810 425 aa22.24■■□□□ 1.15
SH2B3-201ENST00000341259 KANK3Q6NY19 840 aa22.24■■□□□ 1.15
SH2B3-201ENST00000341259 C8orf37Q96NL8 207 aa22.24■■□□□ 1.15
SH2B3-201ENST00000341259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.24■■□□□ 1.156e-7■■■■■ 92
SH2B3-201ENST00000341259 TCP11L1Q9NUJ3 509 aa22.24■■□□□ 1.15
SH2B3-201ENST00000341259 CWC15Q9P013 229 aaKnown RBP22.24■■□□□ 1.15
SH2B3-201ENST00000341259 CCDC171Q6TFL3 1326 aa22.24■■□□□ 1.15
SH2B3-201ENST00000341259 HLA-DOAP06340 250 aa22.24■■□□□ 1.15
SH2B3-201ENST00000341259 GSDMDP57764 484 aa22.24■■□□□ 1.15
SH2B3-201ENST00000341259 SPA17Q15506 151 aa22.24■■□□□ 1.15
SH2B3-201ENST00000341259 HELBQ8NG08 1087 aaPredicted RBP22.24■■□□□ 1.15
SH2B3-201ENST00000341259 UBXN4Q92575 508 aa22.24■■□□□ 1.15
SH2B3-201ENST00000341259 MATR3P43243 847 aaKnown RBP eCLIP22.24■■□□□ 1.15
SH2B3-201ENST00000341259 CCDC148Q8NFR7 591 aa22.24■■□□□ 1.15
SH2B3-201ENST00000341259 KCNG4Q8TDN1 519 aa22.24■■□□□ 1.15
SH2B3-201ENST00000341259 ZNF622Q969S3 477 aaKnown RBP eCLIP22.24■■□□□ 1.15
SH2B3-201ENST00000341259 CFAP65Q6ZU64 1925 aaKnown RBP22.24■■□□□ 1.15
SH2B3-201ENST00000341259 PYM1Q9BRP8 204 aaKnown RBP22.23■■□□□ 1.15
SH2B3-201ENST00000341259 KIF18AQ8NI77 898 aa22.23■■□□□ 1.15
SH2B3-201ENST00000341259 CALML4Q96GE6 196 aa22.23■■□□□ 1.15
SH2B3-201ENST00000341259 NYXQ9GZU5 481 aa22.23■■□□□ 1.15
SH2B3-201ENST00000341259 SLC52A2Q9HAB3 445 aa22.23■■□□□ 1.15
SH2B3-201ENST00000341259 PREX2Q70Z35 1606 aa22.23■■□□□ 1.15
SH2B3-201ENST00000341259 FGFR1OPO95684 399 aaKnown RBP22.23■■□□□ 1.15
SH2B3-201ENST00000341259 TSPY3P0CV98 308 aa22.23■■□□□ 1.15
SH2B3-201ENST00000341259 TSPY8P0CW00 308 aa22.23■■□□□ 1.15
SH2B3-201ENST00000341259 SYKP43405 635 aa22.23■■□□□ 1.15
SH2B3-201ENST00000341259 BTG4Q9NY30 223 aa22.23■■□□□ 1.15
SH2B3-201ENST00000341259 MAGEB6P1A0A0J9YX57 407 aa22.23■■□□□ 1.15
SH2B3-201ENST00000341259 UBA5Q9GZZ9 404 aa22.23■■□□□ 1.15
SH2B3-201ENST00000341259 UBAP1LF5GYI3 381 aa22.22■■□□□ 1.15
SH2B3-201ENST00000341259 CPLX3Q8WVH0 158 aa22.22■■□□□ 1.15
SH2B3-201ENST00000341259 INTS4Q96HW7 963 aaKnown RBP22.22■■□□□ 1.15
SH2B3-201ENST00000341259 NUP88Q99567 741 aaPredicted RBP22.22■■□□□ 1.15
SH2B3-201ENST00000341259 ERVK-7P63135 1459 aa22.22■■□□□ 1.15
SH2B3-201ENST00000341259 CASQ1P31415 396 aa22.22■■□□□ 1.15
SH2B3-201ENST00000341259 APOBRQ0VD83 1088 aa22.22■■□□□ 1.15
SH2B3-201ENST00000341259 CHST3Q7LGC8 479 aa22.22■■□□□ 1.15
SH2B3-201ENST00000341259 STX8Q9UNK0 236 aa22.22■■□□□ 1.15
SH2B3-201ENST00000341259 KIF5CO60282 957 aa22.22■■□□□ 1.15
SH2B3-201ENST00000341259 EIF3JO75822 258 aaKnown RBP22.22■■□□□ 1.15
SH2B3-201ENST00000341259 TAF4BQ92750 862 aa22.22■■□□□ 1.15
SH2B3-201ENST00000341259 LTKP29376 864 aa22.21■■□□□ 1.15
SH2B3-201ENST00000341259 CACNA2D4Q7Z3S7 1137 aa22.21■■□□□ 1.15
SH2B3-201ENST00000341259 SYNMO15061 1565 aa22.21■■□□□ 1.15
SH2B3-201ENST00000341259 GNAT2P19087 354 aa22.21■■□□□ 1.15
SH2B3-201ENST00000341259 MAGEB6Q8N7X4 407 aa22.21■■□□□ 1.15
SH2B3-201ENST00000341259 KIAA0232Q92628 1395 aa22.21■■□□□ 1.15
SH2B3-201ENST00000341259 GOLGA6L10A6NI86 522 aa22.21■■□□□ 1.15
SH2B3-201ENST00000341259 AMPD3Q01432 767 aa22.21■■□□□ 1.15
SH2B3-201ENST00000341259 CCDC178Q5BJE1 867 aa22.21■■□□□ 1.15
SH2B3-201ENST00000341259 TRMT1Q9NXH9 659 aaKnown RBP22.21■■□□□ 1.15
SH2B3-201ENST00000341259 MYOM2P54296 1465 aa22.21■■□□□ 1.15
SH2B3-201ENST00000341259 AOX1Q06278 1338 aa22.21■■□□□ 1.15
SH2B3-201ENST00000341259 MRPS27Q92552 414 aaKnown RBP22.21■■□□□ 1.15
SH2B3-201ENST00000341259 UGGT1Q9NYU2 1555 aa22.2■■□□□ 1.14
SH2B3-201ENST00000341259 UBA7P41226 1012 aa22.2■■□□□ 1.14
SH2B3-201ENST00000341259 LEKR1Q6ZMV7 388 aa22.2■■□□□ 1.14
SH2B3-201ENST00000341259 TNNT1P13805 278 aa22.2■■□□□ 1.14
SH2B3-201ENST00000341259 EHMT1Q9H9B1 1298 aa22.2■■□□□ 1.14
SH2B3-201ENST00000341259 TNNI3KQ59H18 835 aa22.2■■□□□ 1.14
SH2B3-201ENST00000341259 DHX32Q7L7V1 743 aaKnown RBP22.2■■□□□ 1.14
SH2B3-201ENST00000341259 HELLSQ9NRZ9 838 aa22.2■■□□□ 1.14
SH2B3-201ENST00000341259 FPGT-TNNI3KV9GXZ4 949 aa22.2■■□□□ 1.14
SH2B3-201ENST00000341259 ANO6Q4KMQ2 910 aa22.2■■□□□ 1.14
SH2B3-201ENST00000341259 PDCL2Q8N4E4 241 aa22.19■■□□□ 1.14
SH2B3-201ENST00000341259 DACT1Q9NYF0 836 aa22.19■■□□□ 1.14
SH2B3-201ENST00000341259 PNMA6EA0A0J9YXQ4 647 aa22.19■■□□□ 1.14
SH2B3-201ENST00000341259 KIF20AO95235 890 aa22.19■■□□□ 1.14
SH2B3-201ENST00000341259 YEATS4O95619 227 aa22.19■■□□□ 1.14
SH2B3-201ENST00000341259 ZNF804AQ7Z570 1209 aa22.18■■□□□ 1.14
SH2B3-201ENST00000341259 C16orf45Q96MC5 204 aaPredicted RBP22.18■■□□□ 1.14
SH2B3-201ENST00000341259 CABP5Q9NP86 173 aa22.18■■□□□ 1.14
SH2B3-201ENST00000341259 EYA2O00167 538 aa22.18■■□□□ 1.14
SH2B3-201ENST00000341259 URI1O94763 535 aaPredicted RBP22.18■■□□□ 1.14
SH2B3-201ENST00000341259 MIGA1Q8NAN2 632 aa22.18■■□□□ 1.14
SH2B3-201ENST00000341259 FAM89AQ96GI7 184 aa22.18■■□□□ 1.14
SH2B3-201ENST00000341259 KIF24Q5T7B8 1368 aa22.18■■□□□ 1.14
SH2B3-201ENST00000341259 EIF4A1P60842 406 aaKnown RBP22.18■■□□□ 1.14
SH2B3-201ENST00000341259 KLHDC4Q8TBB5 520 aa22.18■■□□□ 1.14
SH2B3-201ENST00000341259 FAM135BQ49AJ0 1406 aa22.18■■□□□ 1.14
SH2B3-201ENST00000341259 XRCC6P12956 609 aaKnown RBP eCLIP22.17■■□□□ 1.141e-8■■■■□ 25.1
SH2B3-201ENST00000341259 PRKCSHP14314 528 aaPredicted RBP22.17■■□□□ 1.14
SH2B3-201ENST00000341259 TPTE2Q6XPS3 522 aa22.17■■□□□ 1.14
SH2B3-201ENST00000341259 SUCLG2Q96I99 432 aa22.17■■□□□ 1.14
SH2B3-201ENST00000341259 MTIF2P46199 727 aaKnown RBP22.17■■□□□ 1.14
SH2B3-201ENST00000341259 PTPDC1A2A3K4 754 aa22.17■■□□□ 1.14
SH2B3-201ENST00000341259 BMP15O95972 392 aa22.17■■□□□ 1.14
SH2B3-201ENST00000341259 CCDC66A2RUB6 948 aa22.17■■□□□ 1.14
SH2B3-201ENST00000341259 NBPF7P0C2Y1 421 aaPredicted RBP22.17■■□□□ 1.14
SH2B3-201ENST00000341259 CPA1P15085 419 aa22.17■■□□□ 1.14
SH2B3-201ENST00000341259 MARCKSP29966 332 aaPredicted RBP22.16■■□□□ 1.14
SH2B3-201ENST00000341259 KIF4BQ2VIQ3 1234 aa22.16■■□□□ 1.14
SH2B3-201ENST00000341259 CCDC191Q8NCU4 936 aa22.16■■□□□ 1.14
SH2B3-201ENST00000341259 RTCBQ9Y3I0 505 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms