RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 CCDC174Q6PII3 467 aa19.01■□□□□ 0.63
SATB1-201ENST00000338745 ZNF354CQ86Y25 554 aa19.01■□□□□ 0.63
SATB1-201ENST00000338745 KCNG4Q8TDN1 519 aa19.01■□□□□ 0.63
SATB1-201ENST00000338745 FERMT1Q9BQL6 677 aa19.01■□□□□ 0.63
SATB1-201ENST00000338745 TROQ12816 1431 aaPredicted RBP19.01■□□□□ 0.63
SATB1-201ENST00000338745 SLU7O95391 586 aaKnown RBP19.01■□□□□ 0.63
SATB1-201ENST00000338745 LZTFL1Q9NQ48 299 aa19.01■□□□□ 0.63
SATB1-201ENST00000338745 DACT1Q9NYF0 836 aa19.01■□□□□ 0.63
SATB1-201ENST00000338745 LRRC27Q9C0I9 530 aa19.01■□□□□ 0.63
SATB1-201ENST00000338745 CCDC172P0C7W6 258 aa19.01■□□□□ 0.63
SATB1-201ENST00000338745 ARL1P40616 181 aaPredicted RBP19.01■□□□□ 0.63
SATB1-201ENST00000338745 MRPS9P82933 396 aaKnown RBP19.01■□□□□ 0.63
SATB1-201ENST00000338745 UBXN1Q04323 297 aa19.01■□□□□ 0.63
SATB1-201ENST00000338745 ACTN2P35609 894 aa19■□□□□ 0.63
SATB1-201ENST00000338745 CCDC50Q8IVM0 306 aa19■□□□□ 0.63
SATB1-201ENST00000338745 DHX58Q96C10 678 aa19■□□□□ 0.63
SATB1-201ENST00000338745 CAVIN2O95810 425 aa19■□□□□ 0.63
SATB1-201ENST00000338745 ZNF569Q5MCW4 686 aa19■□□□□ 0.63
SATB1-201ENST00000338745 ANKLE2Q86XL3 938 aa19■□□□□ 0.63
SATB1-201ENST00000338745 OTUD6BQ8N6M0 293 aa19■□□□□ 0.63
SATB1-201ENST00000338745 CFAP57Q96MR6 1250 aa19■□□□□ 0.63
SATB1-201ENST00000338745 CCDC61Q9Y6R9 512 aa19■□□□□ 0.63
SATB1-201ENST00000338745 DHX29Q7Z478 1369 aaKnown RBP19■□□□□ 0.63
SATB1-201ENST00000338745 TSPY3P0CV98 308 aa19■□□□□ 0.63
SATB1-201ENST00000338745 TSPY8P0CW00 308 aa19■□□□□ 0.63
SATB1-201ENST00000338745 TYRO3Q06418 890 aa19■□□□□ 0.63
SATB1-201ENST00000338745 F13A1P00488 732 aa19■□□□□ 0.63
SATB1-201ENST00000338745 PIK3R4Q99570 1358 aa18.99■□□□□ 0.63
SATB1-201ENST00000338745 GUCA1BQ9UMX6 200 aa18.99■□□□□ 0.63
SATB1-201ENST00000338745 SYT10Q6XYQ8 523 aa18.99■□□□□ 0.63
SATB1-201ENST00000338745 KRBA2Q6ZNG9 492 aa18.99■□□□□ 0.63
SATB1-201ENST00000338745 C16orf71Q8IYS4 520 aaPredicted RBP18.99■□□□□ 0.63
SATB1-201ENST00000338745 DDX12PQ92771 950 aa18.99■□□□□ 0.63
SATB1-201ENST00000338745 BRF1Q92994 677 aa18.99■□□□□ 0.63
SATB1-201ENST00000338745 PABPN1LA6NDY0 278 aaKnown RBP18.99■□□□□ 0.63
SATB1-201ENST00000338745 ZBTB43O43298 467 aa18.99■□□□□ 0.63
SATB1-201ENST00000338745 MRPS27Q92552 414 aaKnown RBP18.99■□□□□ 0.63
SATB1-201ENST00000338745 FEZ1Q99689 392 aa18.99■□□□□ 0.63
SATB1-201ENST00000338745 TACC1O75410 805 aa18.99■□□□□ 0.63
SATB1-201ENST00000338745 RBM8AQ9Y5S9 174 aaKnown RBP18.99■□□□□ 0.63
SATB1-201ENST00000338745 RTN1Q16799 776 aa18.99■□□□□ 0.63
SATB1-201ENST00000338745 PSMC4P43686 418 aa18.98■□□□□ 0.63
SATB1-201ENST00000338745 NBPF11Q86T75 865 aa18.98■□□□□ 0.63
SATB1-201ENST00000338745 C10orf67Q8IYJ2 551 aa18.98■□□□□ 0.63
SATB1-201ENST00000338745 FAM200AQ8TCP9 573 aa18.98■□□□□ 0.63
SATB1-201ENST00000338745 CHST3Q7LGC8 479 aa18.98■□□□□ 0.63
SATB1-201ENST00000338745 GTF3C6Q969F1 213 aa18.98■□□□□ 0.63
SATB1-201ENST00000338745 ESYT1Q9BSJ8 1104 aa18.98■□□□□ 0.63
SATB1-201ENST00000338745 STMN4Q9H169 189 aaPredicted RBP18.98■□□□□ 0.63
SATB1-201ENST00000338745 LMOD1P29536 600 aaPredicted RBP18.98■□□□□ 0.63
SATB1-201ENST00000338745 GTPBP4Q9BZE4 634 aaKnown RBP18.98■□□□□ 0.63
SATB1-201ENST00000338745 NAP1L3Q99457 506 aaPredicted RBP18.98■□□□□ 0.63
SATB1-201ENST00000338745 PHACTR2O75167 634 aa18.98■□□□□ 0.63
SATB1-201ENST00000338745 ZBTB16Q05516 673 aa18.98■□□□□ 0.63
SATB1-201ENST00000338745 UBE3BQ7Z3V4 1068 aa18.98■□□□□ 0.63
SATB1-201ENST00000338745 DISP3Q9P2K9 1392 aa18.98■□□□□ 0.63
SATB1-201ENST00000338745 LDHAL6AQ6ZMR3 332 aa18.97■□□□□ 0.63
SATB1-201ENST00000338745 RAPGEF3O95398 923 aa18.97■□□□□ 0.63
SATB1-201ENST00000338745 ZKSCAN5Q9Y2L8 839 aa18.97■□□□□ 0.63
SATB1-201ENST00000338745 EEF2P13639 858 aaKnown RBP18.97■□□□□ 0.63
SATB1-201ENST00000338745 UBLCP1Q8WVY7 318 aaPredicted RBP18.97■□□□□ 0.63
SATB1-201ENST00000338745 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
SATB1-201ENST00000338745 KCNK9Q9NPC2 374 aa18.97■□□□□ 0.63
SATB1-201ENST00000338745 SLC4A4Q9Y6R1 1079 aa18.97■□□□□ 0.63
SATB1-201ENST00000338745 KRT23Q9C075 422 aa18.97■□□□□ 0.63
SATB1-201ENST00000338745 PI4KAP2A4QPH2 592 aa18.96■□□□□ 0.63
SATB1-201ENST00000338745 DPH6Q7L8W6 267 aa18.96■□□□□ 0.63
SATB1-201ENST00000338745 CCDC25Q86WR0 208 aa18.96■□□□□ 0.63
SATB1-201ENST00000338745 PI4KAP1Q8N8J0 262 aa18.96■□□□□ 0.63
SATB1-201ENST00000338745 IFNKQ9P0W0 207 aa18.96■□□□□ 0.63
SATB1-201ENST00000338745 SSX2IPQ9Y2D8 614 aa18.96■□□□□ 0.63
SATB1-201ENST00000338745 NCOA1Q15788 1441 aa18.96■□□□□ 0.63
SATB1-201ENST00000338745 PLVAPQ9BX97 442 aa18.96■□□□□ 0.63
SATB1-201ENST00000338745 SPAG5Q96R06 1193 aa18.96■□□□□ 0.63
SATB1-201ENST00000338745 ASIC1P78348 528 aa18.95■□□□□ 0.62
SATB1-201ENST00000338745 SEC62Q99442 399 aaKnown RBP18.95■□□□□ 0.62
SATB1-201ENST00000338745 BAG3O95817 575 aa18.95■□□□□ 0.62
SATB1-201ENST00000338745 C6orf229H3BNL8 230 aa18.95■□□□□ 0.62
SATB1-201ENST00000338745 CALM1P0DP23 149 aa18.95■□□□□ 0.62
SATB1-201ENST00000338745 CALM2P0DP24 149 aa18.95■□□□□ 0.62
SATB1-201ENST00000338745 CALM3P0DP25 149 aa18.95■□□□□ 0.62
SATB1-201ENST00000338745 STX17P56962 302 aa18.95■□□□□ 0.62
SATB1-201ENST00000338745 CRNKL1Q9BZJ0 848 aaKnown RBP18.95■□□□□ 0.62
SATB1-201ENST00000338745 CPLX4Q7Z7G2 160 aa18.95■□□□□ 0.62
SATB1-201ENST00000338745 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.95■□□□□ 0.62
SATB1-201ENST00000338745 FAM160A1Q05DH4 1040 aa18.95■□□□□ 0.62
SATB1-201ENST00000338745 MAP3K1Q13233 1512 aa18.94■□□□□ 0.62
SATB1-201ENST00000338745 MCMDC2Q4G0Z9 681 aa18.94■□□□□ 0.62
SATB1-201ENST00000338745 CHPF2Q9P2E5 772 aa18.94■□□□□ 0.62
SATB1-201ENST00000338745 KRT83P78385 493 aa18.94■□□□□ 0.62
SATB1-201ENST00000338745 ABCC5O15440 1437 aa18.94■□□□□ 0.62
SATB1-201ENST00000338745 KIF5AQ12840 1032 aa18.94■□□□□ 0.62
SATB1-201ENST00000338745 CCDC114Q96M63 670 aa18.94■□□□□ 0.62
SATB1-201ENST00000338745 IRX3P78415 501 aaPredicted RBP18.94■□□□□ 0.62
SATB1-201ENST00000338745 HDAC1Q13547 482 aaPredicted RBP18.94■□□□□ 0.62
SATB1-201ENST00000338745 MCM7P33993 719 aa18.94■□□□□ 0.62
SATB1-201ENST00000338745 KRT2P35908 639 aa18.94■□□□□ 0.62
SATB1-201ENST00000338745 MEIS3Q99687 375 aa18.93■□□□□ 0.62
SATB1-201ENST00000338745 ANXA1P04083 346 aa18.93■□□□□ 0.62
SATB1-201ENST00000338745 TMEM87AQ8NBN3 555 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms