RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 CCDC27Q2M243 656 aa20.59■□□□□ 0.89
MUC1-201ENST00000337604 SAPCD2Q86UD0 394 aa20.59■□□□□ 0.89
MUC1-201ENST00000337604 WWC1Q8IX03 1113 aa20.59■□□□□ 0.89
MUC1-201ENST00000337604 DPF2Q92785 391 aa20.59■□□□□ 0.89
MUC1-201ENST00000337604 CCDC85AQ96PX6 553 aaPredicted RBP20.59■□□□□ 0.89
MUC1-201ENST00000337604 PSME4Q14997 1843 aa20.58■□□□□ 0.89
MUC1-201ENST00000337604 DDX58O95786 925 aaKnown RBP20.58■□□□□ 0.89
MUC1-201ENST00000337604 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.89
MUC1-201ENST00000337604 PAXIP1Q6ZW49 1069 aaPredicted RBP20.58■□□□□ 0.89
MUC1-201ENST00000337604 SAMD7Q7Z3H4 446 aa20.58■□□□□ 0.89
MUC1-201ENST00000337604 EYA3Q99504 573 aa20.58■□□□□ 0.89
MUC1-201ENST00000337604 MYH3P11055 1940 aa20.58■□□□□ 0.88
MUC1-201ENST00000337604 PI4KAP2A4QPH2 592 aa20.57■□□□□ 0.88
MUC1-201ENST00000337604 H7C1D1 291 aa20.57■□□□□ 0.88
MUC1-201ENST00000337604 UFL1O94874 794 aa20.57■□□□□ 0.88
MUC1-201ENST00000337604 MAP2K1Q02750 393 aaPredicted RBP20.57■□□□□ 0.88
MUC1-201ENST00000337604 GRM1Q13255 1194 aa20.57■□□□□ 0.88
MUC1-201ENST00000337604 DLK2Q6UY11 383 aa20.57■□□□□ 0.88
MUC1-201ENST00000337604 PI4KAP1Q8N8J0 262 aa20.57■□□□□ 0.88
MUC1-201ENST00000337604 SPEF2Q9C093 1822 aa20.57■□□□□ 0.88
MUC1-201ENST00000337604 HSP90B1P14625 803 aaKnown RBP20.56■□□□□ 0.88
MUC1-201ENST00000337604 ECE1P42892 770 aa20.56■□□□□ 0.88
MUC1-201ENST00000337604 TBC1D10BQ4KMP7 808 aaPredicted RBP20.56■□□□□ 0.88
MUC1-201ENST00000337604 KSR2Q6VAB6 950 aa20.56■□□□□ 0.88
MUC1-201ENST00000337604 G2E3Q7L622 706 aa20.56■□□□□ 0.88
MUC1-201ENST00000337604 POLR2AP24928 1970 aaKnown RBP20.55■□□□□ 0.88
MUC1-201ENST00000337604 RPS12P25398 132 aaKnown RBP20.55■□□□□ 0.88
MUC1-201ENST00000337604 CTSWP56202 376 aa20.55■□□□□ 0.88
MUC1-201ENST00000337604 CDC37L1Q7L3B6 337 aa20.55■□□□□ 0.88
MUC1-201ENST00000337604 ZNF408Q9H9D4 720 aa20.55■□□□□ 0.88
MUC1-201ENST00000337604 ANKIB1Q9P2G1 1089 aa20.55■□□□□ 0.88
MUC1-201ENST00000337604 GGA1Q9UJY5 639 aa20.55■□□□□ 0.88
MUC1-201ENST00000337604 ZNF609O15014 1411 aa20.54■□□□□ 0.88
MUC1-201ENST00000337604 AOC2O75106 756 aa20.54■□□□□ 0.88
MUC1-201ENST00000337604 CWF19L2Q2TBE0 894 aaKnown RBP20.54■□□□□ 0.88
MUC1-201ENST00000337604 TWISTNBQ3B726 338 aaPredicted RBP20.54■□□□□ 0.88
MUC1-201ENST00000337604 CHMP4AQ9BY43 222 aa20.54■□□□□ 0.88
MUC1-201ENST00000337604 IL16Q14005 1332 aa20.53■□□□□ 0.88
MUC1-201ENST00000337604 VIL1P09327 827 aaKnown RBP20.53■□□□□ 0.88
MUC1-201ENST00000337604 USP48Q86UV5 1035 aa20.53■□□□□ 0.88
MUC1-201ENST00000337604 ANKRD18AQ8IVF6 992 aa20.53■□□□□ 0.88
MUC1-201ENST00000337604 ZC3H12CQ9C0D7 883 aaKnown RBP20.53■□□□□ 0.88
MUC1-201ENST00000337604 ZNF646O15015 1829 aaPredicted RBP20.53■□□□□ 0.88
MUC1-201ENST00000337604 XDHP47989 1333 aa20.53■□□□□ 0.88
MUC1-201ENST00000337604 WTIPA6NIX2 430 aaPredicted RBP20.52■□□□□ 0.88
MUC1-201ENST00000337604 NEURL1BA8MQ27 555 aa20.52■□□□□ 0.88
MUC1-201ENST00000337604 TTLL11Q8NHH1 800 aa20.52■□□□□ 0.88
MUC1-201ENST00000337604 HHIPL1Q96JK4 782 aa20.52■□□□□ 0.88
MUC1-201ENST00000337604 STK31Q9BXU1 1019 aa20.52■□□□□ 0.88
MUC1-201ENST00000337604 FANCIQ9NVI1 1328 aa20.52■□□□□ 0.87
MUC1-201ENST00000337604 KIF4BQ2VIQ3 1234 aa20.51■□□□□ 0.87
MUC1-201ENST00000337604 GREM2Q9H772 168 aa20.51■□□□□ 0.87
MUC1-201ENST00000337604 ASTN2O75129 1339 aaPredicted RBP20.51■□□□□ 0.87
MUC1-201ENST00000337604 ADM5C9JUS6 153 aa20.5■□□□□ 0.87
MUC1-201ENST00000337604 RBM26Q5T8P6 1007 aaKnown RBP20.5■□□□□ 0.87
MUC1-201ENST00000337604 KRT26Q7Z3Y9 468 aa20.5■□□□□ 0.87
MUC1-201ENST00000337604 MRS2Q9HD23 443 aa20.5■□□□□ 0.87
MUC1-201ENST00000337604 SLC4A2P04920 1241 aa20.49■□□□□ 0.87
MUC1-201ENST00000337604 MAP2K2P36507 400 aa20.49■□□□□ 0.87
MUC1-201ENST00000337604 NEXNQ0ZGT2 675 aa20.49■□□□□ 0.87
MUC1-201ENST00000337604 NCBP3Q53F19 620 aaKnown RBP20.49■□□□□ 0.87
MUC1-201ENST00000337604 UBE3BQ7Z3V4 1068 aa20.49■□□□□ 0.87
MUC1-201ENST00000337604 CDC5LQ99459 802 aaKnown RBP20.49■□□□□ 0.87
MUC1-201ENST00000337604 GGA3Q9NZ52 723 aa20.49■□□□□ 0.87
MUC1-201ENST00000337604 H7C1W4 665 aa20.48■□□□□ 0.87
MUC1-201ENST00000337604 FLIIQ13045 1269 aa20.48■□□□□ 0.87
MUC1-201ENST00000337604 RSBN1LQ6PCB5 846 aaPredicted RBP20.48■□□□□ 0.87
MUC1-201ENST00000337604 GMLQ99445 158 aa20.48■□□□□ 0.87
MUC1-201ENST00000337604 TSKSQ9UJT2 592 aa20.48■□□□□ 0.87
MUC1-201ENST00000337604 MINPP1Q9UNW1 487 aa20.48■□□□□ 0.87
MUC1-201ENST00000337604 CACNA1FO60840 1977 aa20.48■□□□□ 0.87
MUC1-201ENST00000337604 MED23Q9ULK4 1368 aa20.47■□□□□ 0.87
MUC1-201ENST00000337604 ATP2B4P23634 1241 aa20.47■□□□□ 0.87
MUC1-201ENST00000337604 CASP7P55210 303 aa20.47■□□□□ 0.87
MUC1-201ENST00000337604 ZNF280AP59817 542 aaPredicted RBP20.47■□□□□ 0.87
MUC1-201ENST00000337604 ZIC5Q96T25 663 aa20.47■□□□□ 0.87
MUC1-201ENST00000337604 BSDC1Q9NW68 430 aaPredicted RBP20.47■□□□□ 0.87
MUC1-201ENST00000337604 G3V3G9 751 aa20.46■□□□□ 0.87
MUC1-201ENST00000337604 HUNKP57058 714 aa20.46■□□□□ 0.87
MUC1-201ENST00000337604 GCKRQ14397 625 aa20.46■□□□□ 0.87
MUC1-201ENST00000337604 DCAF8Q5TAQ9 597 aa20.46■□□□□ 0.87
MUC1-201ENST00000337604 AGBL3Q8NEM8 1001 aa20.46■□□□□ 0.87
MUC1-201ENST00000337604 DCPSQ96C86 337 aaKnown RBP20.46■□□□□ 0.87
MUC1-201ENST00000337604 BEGAINQ9BUH8 593 aa20.46■□□□□ 0.87
MUC1-201ENST00000337604 BRPF1P55201 1214 aaPredicted RBP20.45■□□□□ 0.86
MUC1-201ENST00000337604 PLA2G12BQ9BX93 195 aa20.45■□□□□ 0.86
MUC1-201ENST00000337604 GBA2Q9HCG7 927 aaPredicted RBP20.45■□□□□ 0.86
MUC1-201ENST00000337604 VAMP4O75379 141 aa20.44■□□□□ 0.86
MUC1-201ENST00000337604 FAM161AQ3B820 660 aa20.44■□□□□ 0.86
MUC1-201ENST00000337604 DNAAF4Q8WXU2 420 aa20.44■□□□□ 0.86
MUC1-201ENST00000337604 SPINK5Q9NQ38 1064 aaPredicted RBP20.44■□□□□ 0.86
MUC1-201ENST00000337604 SALL2Q9Y467 1007 aaPredicted RBP20.44■□□□□ 0.86
MUC1-201ENST00000337604 USP17L3A6NCW0 530 aa20.43■□□□□ 0.86
MUC1-201ENST00000337604 USP17L4A6NCW7 530 aa20.43■□□□□ 0.86
MUC1-201ENST00000337604 FAM155AB1AL88 458 aaPredicted RBP20.43■□□□□ 0.86
MUC1-201ENST00000337604 CCT4P50991 539 aaKnown RBP20.43■□□□□ 0.86
MUC1-201ENST00000337604 FKBP5Q13451 457 aaPredicted RBP20.43■□□□□ 0.86
MUC1-201ENST00000337604 USP17L1Q7RTZ2 530 aa20.43■□□□□ 0.86
MUC1-201ENST00000337604 PODNQ7Z5L7 613 aa20.43■□□□□ 0.86
MUC1-201ENST00000337604 TXNRD3Q86VQ6 643 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms