RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 CCDC94Q9BW85 323 aaPredicted RBP11.96□□□□□ -0.49
HIF1A-202ENST00000337138 RFX7Q2KHR2 1363 aa11.96□□□□□ -0.5
HIF1A-202ENST00000337138 CHGBP05060 677 aa11.96□□□□□ -0.5
HIF1A-202ENST00000337138 FILIP1Q7Z7B0 1213 aa11.96□□□□□ -0.5
HIF1A-202ENST00000337138 EAF2Q96CJ1 260 aaPredicted RBP11.96□□□□□ -0.5
HIF1A-202ENST00000337138 NEUROD6Q96NK8 337 aa11.96□□□□□ -0.5
HIF1A-202ENST00000337138 ZNF609O15014 1411 aa11.96□□□□□ -0.5
HIF1A-202ENST00000337138 MAP3K11Q16584 847 aa11.95□□□□□ -0.5
HIF1A-202ENST00000337138 HSP90AB4PQ58FF6 505 aa11.95□□□□□ -0.5
HIF1A-202ENST00000337138 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.95□□□□□ -0.5
HIF1A-202ENST00000337138 V9GYY5 206 aaPredicted RBP11.95□□□□□ -0.5
HIF1A-202ENST00000337138 ELP1O95163 1332 aa11.95□□□□□ -0.5
HIF1A-202ENST00000337138 SALL1Q9NSC2 1324 aa11.95□□□□□ -0.5
HIF1A-202ENST00000337138 RABL6Q3YEC7 729 aaPredicted RBP11.95□□□□□ -0.5
HIF1A-202ENST00000337138 ANO6Q4KMQ2 910 aa11.95□□□□□ -0.5
HIF1A-202ENST00000337138 EPHA10Q5JZY3 1008 aa11.95□□□□□ -0.5
HIF1A-202ENST00000337138 CCDC129Q6ZRS4 1044 aa11.95□□□□□ -0.5
HIF1A-202ENST00000337138 RAB11FIP4Q86YS3 637 aa11.95□□□□□ -0.5
HIF1A-202ENST00000337138 NRBP1Q9UHY1 535 aa11.95□□□□□ -0.5
HIF1A-202ENST00000337138 UVSSAQ2YD98 709 aa11.95□□□□□ -0.5
HIF1A-202ENST00000337138 ALDH1L1O75891 902 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 CREB3L3Q68CJ9 461 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 LARP1Q6PKG0 1096 aaKnown RBP11.94□□□□□ -0.5
HIF1A-202ENST00000337138 DNAJC25Q9H1X3 360 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 PRDM4Q9UKN5 801 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 SLIT2O94813 1529 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 FOXP2O15409 715 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 JAK2O60674 1132 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 CCT2P78371 535 aaKnown RBP11.94□□□□□ -0.5
HIF1A-202ENST00000337138 TTC6Q86TZ1 520 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 PIBF1Q8WXW3 757 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 SUCLG2Q96I99 432 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 AGXT2Q9BYV1 514 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 C1orf167Q5SNV9 1468 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 GOLGA6L19H0YKK7 550 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 TPD52L1Q16890 204 aaPredicted RBP11.94□□□□□ -0.5
HIF1A-202ENST00000337138 CHST3Q7LGC8 479 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 TRMT1Q9NXH9 659 aaKnown RBP11.94□□□□□ -0.5
HIF1A-202ENST00000337138 TNS2Q63HR2 1409 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 DLEC1Q9Y238 1755 aa11.94□□□□□ -0.5
HIF1A-202ENST00000337138 BECN2A8MW95 431 aa11.93□□□□□ -0.5
HIF1A-202ENST00000337138 LETM1O95202 739 aaPredicted RBP11.93□□□□□ -0.5
HIF1A-202ENST00000337138 ATP5J2-PTCD1G3V325 749 aa11.93□□□□□ -0.5
HIF1A-202ENST00000337138 PTCD1O75127 700 aaKnown RBP11.93□□□□□ -0.5
HIF1A-202ENST00000337138 SYTL4Q96C24 671 aaPredicted RBP11.93□□□□□ -0.5
HIF1A-202ENST00000337138 RIOK3O14730 519 aaKnown RBP11.93□□□□□ -0.5
HIF1A-202ENST00000337138 LAMB2P55268 1798 aa11.93□□□□□ -0.5
HIF1A-202ENST00000337138 ZC3H6P61129 1189 aaKnown RBP11.93□□□□□ -0.5
HIF1A-202ENST00000337138 TYRO3Q06418 890 aa11.93□□□□□ -0.5
HIF1A-202ENST00000337138 KSR2Q6VAB6 950 aa11.93□□□□□ -0.5
HIF1A-202ENST00000337138 CCDC85AQ96PX6 553 aaPredicted RBP11.93□□□□□ -0.5
HIF1A-202ENST00000337138 A0A0D9SFI3 127 aa11.92□□□□□ -0.5
HIF1A-202ENST00000337138 SLFNL1Q499Z3 407 aa11.92□□□□□ -0.5
HIF1A-202ENST00000337138 ZNF589Q86UQ0 364 aaPredicted RBP11.92□□□□□ -0.5
HIF1A-202ENST00000337138 STK11IPQ8N1F8 1099 aa11.92□□□□□ -0.5
HIF1A-202ENST00000337138 BICC1Q9H694 974 aaKnown RBP11.92□□□□□ -0.5
HIF1A-202ENST00000337138 PHLPP1O60346 1717 aa11.92□□□□□ -0.5
HIF1A-202ENST00000337138 TIAM2Q8IVF5 1701 aa11.92□□□□□ -0.5
HIF1A-202ENST00000337138 PLCH1Q4KWH8 1693 aa11.92□□□□□ -0.5
HIF1A-202ENST00000337138 CSB-PGBD3P0DP91 1061 aa11.92□□□□□ -0.5
HIF1A-202ENST00000337138 RNF20Q5VTR2 975 aa11.92□□□□□ -0.5
HIF1A-202ENST00000337138 DDX46Q7L014 1031 aaKnown RBP11.92□□□□□ -0.5
HIF1A-202ENST00000337138 U2AF2P26368 475 aaKnown RBP eCLIP11.92□□□□□ -0.55e-9■■■■□ 19.5
HIF1A-202ENST00000337138 MYRIPQ8NFW9 859 aa11.92□□□□□ -0.5
HIF1A-202ENST00000337138 SEC62Q99442 399 aaKnown RBP11.92□□□□□ -0.5
HIF1A-202ENST00000337138 CHMP4AQ9BY43 222 aa11.92□□□□□ -0.5
HIF1A-202ENST00000337138 PHF8Q9UPP1 1060 aa11.92□□□□□ -0.5
HIF1A-202ENST00000337138 UBAP1LF5GYI3 381 aa11.91□□□□□ -0.5
HIF1A-202ENST00000337138 NAA30Q147X3 362 aaPredicted RBP11.91□□□□□ -0.5
HIF1A-202ENST00000337138 THEMISQ8N1K5 641 aaPredicted RBP11.91□□□□□ -0.5
HIF1A-202ENST00000337138 ZBTB9Q96C00 473 aa11.91□□□□□ -0.5
HIF1A-202ENST00000337138 MYD88Q99836 296 aa11.91□□□□□ -0.5
HIF1A-202ENST00000337138 FTOQ9C0B1 505 aaKnown RBP eCLIP11.91□□□□□ -0.5
HIF1A-202ENST00000337138 PSMA5P28066 241 aa11.91□□□□□ -0.5
HIF1A-202ENST00000337138 ZNF165P49910 485 aa11.91□□□□□ -0.5
HIF1A-202ENST00000337138 ISM2Q6H9L7 571 aa11.91□□□□□ -0.5
HIF1A-202ENST00000337138 PROSER2Q86WR7 435 aaPredicted RBP11.91□□□□□ -0.5
HIF1A-202ENST00000337138 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
HIF1A-202ENST00000337138 DBF4Q9UBU7 674 aaPredicted RBP11.91□□□□□ -0.5
HIF1A-202ENST00000337138 SLC27A2O14975 620 aa11.91□□□□□ -0.5
HIF1A-202ENST00000337138 ILDR1Q86SU0 546 aaPredicted RBP11.91□□□□□ -0.5
HIF1A-202ENST00000337138 BRF1Q92994 677 aa11.91□□□□□ -0.5
HIF1A-202ENST00000337138 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
HIF1A-202ENST00000337138 NLRP2Q9NX02 1062 aa11.91□□□□□ -0.5
HIF1A-202ENST00000337138 ERBB3P21860 1342 aa11.9□□□□□ -0.5
HIF1A-202ENST00000337138 NEXNQ0ZGT2 675 aa11.9□□□□□ -0.5
HIF1A-202ENST00000337138 EVI5LQ96CN4 794 aa11.9□□□□□ -0.5
HIF1A-202ENST00000337138 FBXL16Q8N461 479 aa11.9□□□□□ -0.5
HIF1A-202ENST00000337138 KIAA1524Q8TCG1 905 aa11.9□□□□□ -0.5
HIF1A-202ENST00000337138 NUP98P52948 1817 aa11.9□□□□□ -0.51
HIF1A-202ENST00000337138 NR1I2O75469 434 aa11.9□□□□□ -0.51
HIF1A-202ENST00000337138 CLIP2Q9UDT6 1046 aa11.9□□□□□ -0.51
HIF1A-202ENST00000337138 MRVI1Q9Y6F6 885 aa11.9□□□□□ -0.51
HIF1A-202ENST00000337138 CTIFO43310 598 aaKnown RBP11.89□□□□□ -0.51
HIF1A-202ENST00000337138 TAF5LO75529 589 aa11.89□□□□□ -0.51
HIF1A-202ENST00000337138 CTDNEP1O95476 244 aa11.89□□□□□ -0.51
HIF1A-202ENST00000337138 TNNT1P13805 278 aa11.89□□□□□ -0.51
HIF1A-202ENST00000337138 SF3A1Q15459 793 aaKnown RBP11.89□□□□□ -0.51
HIF1A-202ENST00000337138 PLEKHO1Q53GL0 409 aaPredicted RBP11.89□□□□□ -0.51
HIF1A-202ENST00000337138 SMARCC2Q8TAQ2 1214 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms