RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 RBM17Q96I25 401 aaKnown RBP23.03■■□□□ 1.28
EXOSC3-201ENST00000327304 SRGNP10124 158 aa23.02■■□□□ 1.28
EXOSC3-201ENST00000327304 GRAPQ13588 217 aa23.02■■□□□ 1.28
EXOSC3-201ENST00000327304 GRAPLQ8TC17 118 aaPredicted RBP23.02■■□□□ 1.28
EXOSC3-201ENST00000327304 PTGER2P43116 358 aa23.01■■□□□ 1.27
EXOSC3-201ENST00000327304 C2CD5Q86YS7 1000 aa23.01■■□□□ 1.27
EXOSC3-201ENST00000327304 METTL24Q5JXM2 366 aa23.01■■□□□ 1.27
EXOSC3-201ENST00000327304 BSDC1Q9NW68 430 aaPredicted RBP23.01■■□□□ 1.27
EXOSC3-201ENST00000327304 SEC24BO95487 1268 aa23■■□□□ 1.27
EXOSC3-201ENST00000327304 NPR1P16066 1061 aa23■■□□□ 1.27
EXOSC3-201ENST00000327304 DDRGK1Q96HY6 314 aa23■■□□□ 1.27
EXOSC3-201ENST00000327304 CRAMP1Q96RY5 1269 aa23■■□□□ 1.27
EXOSC3-201ENST00000327304 UPF2Q9HAU5 1272 aaKnown RBP23■■□□□ 1.27
EXOSC3-201ENST00000327304 CHRNA5P30532 468 aa22.99■■□□□ 1.27
EXOSC3-201ENST00000327304 SLC51AQ86UW1 340 aa22.99■■□□□ 1.27
EXOSC3-201ENST00000327304 CEP126Q9P2H0 1117 aa22.99■■□□□ 1.27
EXOSC3-201ENST00000327304 KIF13BQ9NQT8 1826 aa22.99■■□□□ 1.27
EXOSC3-201ENST00000327304 CLASRPQ8N2M8 674 aaKnown RBP22.98■■□□□ 1.27
EXOSC3-201ENST00000327304 VGLL2Q8N8G2 317 aa22.98■■□□□ 1.27
EXOSC3-201ENST00000327304 HELBQ8NG08 1087 aaPredicted RBP22.98■■□□□ 1.27
EXOSC3-201ENST00000327304 EAF2Q96CJ1 260 aaPredicted RBP22.98■■□□□ 1.27
EXOSC3-201ENST00000327304 MROH5Q6ZUA9 1318 aa22.98■■□□□ 1.27
EXOSC3-201ENST00000327304 H0YIN7 160 aa22.98■■□□□ 1.27
EXOSC3-201ENST00000327304 TNNI3KQ59H18 835 aa22.98■■□□□ 1.27
EXOSC3-201ENST00000327304 AACSQ86V21 672 aa22.98■■□□□ 1.27
EXOSC3-201ENST00000327304 MASTLQ96GX5 879 aa22.98■■□□□ 1.27
EXOSC3-201ENST00000327304 FPGT-TNNI3KV9GXZ4 949 aa22.98■■□□□ 1.27
EXOSC3-201ENST00000327304 ZNF609O15014 1411 aa22.97■■□□□ 1.27
EXOSC3-201ENST00000327304 SALL3Q9BXA9 1300 aa22.96■■□□□ 1.27
EXOSC3-201ENST00000327304 CHRNDQ07001 517 aa22.96■■□□□ 1.27
EXOSC3-201ENST00000327304 ZNF622Q969S3 477 aaKnown RBP eCLIP22.96■■□□□ 1.27
EXOSC3-201ENST00000327304 OSBPL3Q9H4L5 887 aa22.96■■□□□ 1.27
EXOSC3-201ENST00000327304 MINPP1Q9UNW1 487 aa22.96■■□□□ 1.27
EXOSC3-201ENST00000327304 A0A1B0GUL6 1792 aa22.96■■□□□ 1.27
EXOSC3-201ENST00000327304 TTC22Q5TAA0 569 aa22.96■■□□□ 1.27
EXOSC3-201ENST00000327304 CCDC8Q9H0W5 538 aaPredicted RBP22.96■■□□□ 1.27
EXOSC3-201ENST00000327304 GPR108Q9NPR9 543 aa22.96■■□□□ 1.27
EXOSC3-201ENST00000327304 TLR7Q9NYK1 1049 aaKnown RBP22.96■■□□□ 1.27
EXOSC3-201ENST00000327304 TAF5LO75529 589 aa22.95■■□□□ 1.26
EXOSC3-201ENST00000327304 STYK1Q6J9G0 422 aa22.95■■□□□ 1.26
EXOSC3-201ENST00000327304 BBOX1O75936 387 aa22.94■■□□□ 1.26
EXOSC3-201ENST00000327304 PDE8BO95263 885 aa22.94■■□□□ 1.26
EXOSC3-201ENST00000327304 IFIT2P09913 472 aaKnown RBP22.94■■□□□ 1.26
EXOSC3-201ENST00000327304 SPON1Q9HCB6 807 aa22.94■■□□□ 1.26
EXOSC3-201ENST00000327304 TIMM10P62072 90 aa22.94■■□□□ 1.26
EXOSC3-201ENST00000327304 TSHZ3Q63HK5 1081 aa22.94■■□□□ 1.26
EXOSC3-201ENST00000327304 DLEC1Q9Y238 1755 aa22.93■■□□□ 1.26
EXOSC3-201ENST00000327304 KIAA1551Q9HCM1 1747 aa22.93■■□□□ 1.26
EXOSC3-201ENST00000327304 SNAP23O00161 211 aa22.93■■□□□ 1.26
EXOSC3-201ENST00000327304 SOCS7O14512 581 aa22.93■■□□□ 1.26
EXOSC3-201ENST00000327304 PPEF1O14829 653 aaPredicted RBP22.93■■□□□ 1.26
EXOSC3-201ENST00000327304 GSPT1P15170 499 aaKnown RBP22.93■■□□□ 1.26
EXOSC3-201ENST00000327304 MX1P20591 662 aa22.93■■□□□ 1.26
EXOSC3-201ENST00000327304 ALDH1B1P30837 517 aa22.93■■□□□ 1.26
EXOSC3-201ENST00000327304 ATP2B3Q16720 1220 aa22.93■■□□□ 1.26
EXOSC3-201ENST00000327304 DBNLQ9UJU6 430 aaKnown RBP22.93■■□□□ 1.26
EXOSC3-201ENST00000327304 CACNA1SQ13698 1873 aa22.93■■□□□ 1.26
EXOSC3-201ENST00000327304 A0A1B0GUL7 405 aa22.92■■□□□ 1.26
EXOSC3-201ENST00000327304 DPEP1P16444 411 aa22.92■■□□□ 1.26
EXOSC3-201ENST00000327304 AKAP2Q9Y2D5 859 aa22.92■■□□□ 1.26
EXOSC3-201ENST00000327304 A0A0G2JLW4 131 aa22.92■■□□□ 1.26
EXOSC3-201ENST00000327304 EIF5BO60841 1220 aaKnown RBP22.92■■□□□ 1.26
EXOSC3-201ENST00000327304 PDE1AP54750 535 aa22.92■■□□□ 1.26
EXOSC3-201ENST00000327304 TBC1D32Q96NH3 1257 aa22.92■■□□□ 1.26
EXOSC3-201ENST00000327304 NEUROD6Q96NK8 337 aa22.92■■□□□ 1.26
EXOSC3-201ENST00000327304 DBNDD2Q9BQY9 259 aa22.92■■□□□ 1.26
EXOSC3-201ENST00000327304 PPP1R1BQ9UD71 204 aaPredicted RBP22.92■■□□□ 1.26
EXOSC3-201ENST00000327304 FGFR2P21802 821 aa22.91■■□□□ 1.26
EXOSC3-201ENST00000327304 PUM3Q15397 648 aaKnown RBP22.91■■□□□ 1.26
EXOSC3-201ENST00000327304 KLHL34Q8N239 644 aa22.91■■□□□ 1.26
EXOSC3-201ENST00000327304 LRRC37AA6NMS7 1700 aa22.91■■□□□ 1.26
EXOSC3-201ENST00000327304 WTIPA6NIX2 430 aaPredicted RBP22.9■■□□□ 1.26
EXOSC3-201ENST00000327304 ADORA1P30542 326 aa22.9■■□□□ 1.26
EXOSC3-201ENST00000327304 STAP2Q9UGK3 403 aa22.9■■□□□ 1.26
EXOSC3-201ENST00000327304 SLX4Q8IY92 1834 aa22.9■■□□□ 1.26
EXOSC3-201ENST00000327304 KCNA3P22001 575 aa22.89■■□□□ 1.26
EXOSC3-201ENST00000327304 PRPF40BQ6NWY9 871 aaKnown RBP22.89■■□□□ 1.26
EXOSC3-201ENST00000327304 TMC4Q7Z404 712 aa22.89■■□□□ 1.26
EXOSC3-201ENST00000327304 CNKSR1Q969H4 720 aa22.89■■□□□ 1.26
EXOSC3-201ENST00000327304 ANKRD2Q9GZV1 360 aa22.89■■□□□ 1.26
EXOSC3-201ENST00000327304 CDC45O75419 566 aa22.89■■□□□ 1.25
EXOSC3-201ENST00000327304 TGFB2P61812 414 aa22.89■■□□□ 1.25
EXOSC3-201ENST00000327304 OLFM4Q6UX06 510 aa22.89■■□□□ 1.25
EXOSC3-201ENST00000327304 ATP6V0A2Q9Y487 856 aa22.89■■□□□ 1.25
EXOSC3-201ENST00000327304 CD2APQ9Y5K6 639 aa22.89■■□□□ 1.25
EXOSC3-201ENST00000327304 SP8Q8IXZ3 490 aa22.88■■□□□ 1.25
EXOSC3-201ENST00000327304 LPIN2Q92539 896 aa22.88■■□□□ 1.25
EXOSC3-201ENST00000327304 XAGE2Q96GT9 111 aa22.88■■□□□ 1.25
EXOSC3-201ENST00000327304 ARAP2Q8WZ64 1704 aa22.88■■□□□ 1.25
EXOSC3-201ENST00000327304 GPSM2P81274 684 aa22.87■■□□□ 1.25
EXOSC3-201ENST00000327304 AOX1Q06278 1338 aa22.87■■□□□ 1.25
EXOSC3-201ENST00000327304 ECHDC1Q9NTX5 307 aa22.87■■□□□ 1.25
EXOSC3-201ENST00000327304 ANKIB1Q9P2G1 1089 aa22.87■■□□□ 1.25
EXOSC3-201ENST00000327304 XDHP47989 1333 aa22.86■■□□□ 1.25
EXOSC3-201ENST00000327304 SLC5A1P13866 664 aa22.86■■□□□ 1.25
EXOSC3-201ENST00000327304 MFAP1P55081 439 aaKnown RBP22.86■■□□□ 1.25
EXOSC3-201ENST00000327304 TBC1D9Q6ZT07 1266 aa22.86■■□□□ 1.25
EXOSC3-201ENST00000327304 PI4K2BQ8TCG2 481 aa22.86■■□□□ 1.25
EXOSC3-201ENST00000327304 GPATCH3Q96I76 525 aa22.86■■□□□ 1.25
EXOSC3-201ENST00000327304 TTC41PQ6P2S7 1318 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms