RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 G2E3Q7L622 706 aa16.15■□□□□ 0.18
CKS2-201ENST00000314355 UBE3BQ7Z3V4 1068 aa16.15■□□□□ 0.18
CKS2-201ENST00000314355 LINS1Q8NG48 757 aa16.15■□□□□ 0.18
CKS2-201ENST00000314355 MPHOSPH8Q99549 860 aa16.15■□□□□ 0.18
CKS2-201ENST00000314355 XDHP47989 1333 aa16.15■□□□□ 0.18
CKS2-201ENST00000314355 H7C1W4 665 aa16.14■□□□□ 0.17
CKS2-201ENST00000314355 HSPA1AP0DMV8 641 aaKnown RBP16.14■□□□□ 0.17
CKS2-201ENST00000314355 HSPA1BP0DMV9 641 aaKnown RBP16.14■□□□□ 0.17
CKS2-201ENST00000314355 GCKRQ14397 625 aa16.14■□□□□ 0.17
CKS2-201ENST00000314355 CDC37L1Q7L3B6 337 aa16.14■□□□□ 0.17
CKS2-201ENST00000314355 TTLL11Q8NHH1 800 aa16.14■□□□□ 0.17
CKS2-201ENST00000314355 BSDC1Q9NW68 430 aaPredicted RBP16.14■□□□□ 0.17
CKS2-201ENST00000314355 LAMB2P55268 1798 aa16.13■□□□□ 0.17
CKS2-201ENST00000314355 PSMD14O00487 310 aa16.13■□□□□ 0.17
CKS2-201ENST00000314355 ECE1P42892 770 aa16.13■□□□□ 0.17
CKS2-201ENST00000314355 MICALL2Q8IY33 904 aa16.13■□□□□ 0.17
CKS2-201ENST00000314355 CNTNAP1P78357 1384 aa16.13■□□□□ 0.17
CKS2-201ENST00000314355 YDJCA8MPS7 323 aa16.12■□□□□ 0.17
CKS2-201ENST00000314355 RBM26Q5T8P6 1007 aaKnown RBP16.12■□□□□ 0.17
CKS2-201ENST00000314355 PODNQ7Z5L7 613 aa16.12■□□□□ 0.17
CKS2-201ENST00000314355 ANKRD2Q9GZV1 360 aa16.12■□□□□ 0.17
CKS2-201ENST00000314355 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
CKS2-201ENST00000314355 COL4A5P29400 1685 aa16.11■□□□□ 0.17
CKS2-201ENST00000314355 DDX60Q8IY21 1712 aaKnown RBP16.11■□□□□ 0.17
CKS2-201ENST00000314355 KCNJ4P48050 445 aa16.11■□□□□ 0.17
CKS2-201ENST00000314355 VEGFBP49765 207 aa16.11■□□□□ 0.17
CKS2-201ENST00000314355 DCPSQ96C86 337 aaKnown RBP16.11■□□□□ 0.17
CKS2-201ENST00000314355 BEGAINQ9BUH8 593 aa16.11■□□□□ 0.17
CKS2-201ENST00000314355 GREM2Q9H772 168 aa16.11■□□□□ 0.17
CKS2-201ENST00000314355 ANKRD18BA2A2Z9 1011 aa16.1■□□□□ 0.17
CKS2-201ENST00000314355 RASSF10A6NK89 507 aa16.1■□□□□ 0.17
CKS2-201ENST00000314355 MAP2K1Q02750 393 aaPredicted RBP16.1■□□□□ 0.17
CKS2-201ENST00000314355 PLA2G12BQ9BX93 195 aa16.1■□□□□ 0.17
CKS2-201ENST00000314355 C9orf78Q9NZ63 289 aaPredicted RBP16.1■□□□□ 0.17
CKS2-201ENST00000314355 PGAP2Q9UHJ9 254 aa16.1■□□□□ 0.17
CKS2-201ENST00000314355 CHMP3Q9Y3E7 222 aa16.1■□□□□ 0.17
CKS2-201ENST00000314355 TAF1P21675 1872 aa16.1■□□□□ 0.17
CKS2-201ENST00000314355 CELF2O95319 508 aaKnown RBP16.09■□□□□ 0.17
CKS2-201ENST00000314355 VIL1P09327 827 aaKnown RBP16.09■□□□□ 0.17
CKS2-201ENST00000314355 ITGA6P23229 1130 aa16.09■□□□□ 0.17
CKS2-201ENST00000314355 CCT4P50991 539 aaKnown RBP16.09■□□□□ 0.17
CKS2-201ENST00000314355 GRM1Q13255 1194 aa16.09■□□□□ 0.17
CKS2-201ENST00000314355 AGBL3Q8NEM8 1001 aa16.09■□□□□ 0.17
CKS2-201ENST00000314355 GPR101Q96P66 508 aaPredicted RBP16.09■□□□□ 0.17
CKS2-201ENST00000314355 ZNF408Q9H9D4 720 aa16.09■□□□□ 0.17
CKS2-201ENST00000314355 MINPP1Q9UNW1 487 aa16.09■□□□□ 0.17
CKS2-201ENST00000314355 LEMD3Q9Y2U8 911 aa16.09■□□□□ 0.17
CKS2-201ENST00000314355 WDR33Q9C0J8 1336 aaKnown RBP16.09■□□□□ 0.17
CKS2-201ENST00000314355 USP17L3A6NCW0 530 aa16.08■□□□□ 0.16
CKS2-201ENST00000314355 USP17L4A6NCW7 530 aa16.08■□□□□ 0.16
CKS2-201ENST00000314355 IFIT5Q13325 482 aaKnown RBP16.08■□□□□ 0.16
CKS2-201ENST00000314355 TBC1D10BQ4KMP7 808 aaPredicted RBP16.08■□□□□ 0.16
CKS2-201ENST00000314355 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.16
CKS2-201ENST00000314355 SLC4A10Q6U841 1118 aa16.08■□□□□ 0.16
CKS2-201ENST00000314355 USP17L1Q7RTZ2 530 aa16.08■□□□□ 0.16
CKS2-201ENST00000314355 SAMD7Q7Z3H4 446 aa16.08■□□□□ 0.16
CKS2-201ENST00000314355 TNS4Q8IZW8 715 aa16.08■□□□□ 0.16
CKS2-201ENST00000314355 GLIS2Q9BZE0 524 aaPredicted RBP16.08■□□□□ 0.16
CKS2-201ENST00000314355 TRAF5O00463 557 aa16.07■□□□□ 0.16
CKS2-201ENST00000314355 CCDC57Q2TAC2 916 aa16.07■□□□□ 0.16
CKS2-201ENST00000314355 RSBN1LQ6PCB5 846 aaPredicted RBP16.07■□□□□ 0.16
CKS2-201ENST00000314355 OGFOD1Q8N543 542 aa16.07■□□□□ 0.16
CKS2-201ENST00000314355 FBXW7Q969H0 707 aa16.07■□□□□ 0.16
CKS2-201ENST00000314355 KCNQ5Q9NR82 932 aa16.07■□□□□ 0.16
CKS2-201ENST00000314355 RTL9Q8NET4 1388 aa16.07■□□□□ 0.16
CKS2-201ENST00000314355 E9PSI1 815 aa16.06■□□□□ 0.16
CKS2-201ENST00000314355 F6X3S4 739 aa16.06■□□□□ 0.16
CKS2-201ENST00000314355 CSF1RP07333 972 aa16.06■□□□□ 0.16
CKS2-201ENST00000314355 CTCFP49711 727 aaPredicted RBP16.06■□□□□ 0.16
CKS2-201ENST00000314355 HIRAP54198 1017 aaPredicted RBP16.06■□□□□ 0.16
CKS2-201ENST00000314355 KIF4BQ2VIQ3 1234 aa16.06■□□□□ 0.16
CKS2-201ENST00000314355 BEND3Q5T5X7 828 aa16.06■□□□□ 0.16
CKS2-201ENST00000314355 COL13A1Q5TAT6 717 aaPredicted RBP16.06■□□□□ 0.16
CKS2-201ENST00000314355 KRT26Q7Z3Y9 468 aa16.06■□□□□ 0.16
CKS2-201ENST00000314355 USP48Q86UV5 1035 aa16.06■□□□□ 0.16
CKS2-201ENST00000314355 SULF1Q8IWU6 871 aa16.06■□□□□ 0.16
CKS2-201ENST00000314355 TRPM4Q8TD43 1214 aa16.06■□□□□ 0.16
CKS2-201ENST00000314355 SRCIN1Q9C0H9 1055 aa16.06■□□□□ 0.16
CKS2-201ENST00000314355 COA1Q9GZY4 146 aa16.06■□□□□ 0.16
CKS2-201ENST00000314355 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
CKS2-201ENST00000314355 TLL2Q9Y6L7 1015 aa16.06■□□□□ 0.16
CKS2-201ENST00000314355 ALDH1L1O75891 902 aa16.05■□□□□ 0.16
CKS2-201ENST00000314355 USP17L8P0C7I0 530 aa16.05■□□□□ 0.16
CKS2-201ENST00000314355 CST9Q5W186 159 aa16.05■□□□□ 0.16
CKS2-201ENST00000314355 C2orf69Q8N8R5 385 aa16.05■□□□□ 0.16
CKS2-201ENST00000314355 CAPNS2Q96L46 248 aa16.05■□□□□ 0.16
CKS2-201ENST00000314355 CACNA1FO60840 1977 aa16.05■□□□□ 0.16
CKS2-201ENST00000314355 ADAMTSL1Q8N6G6 1762 aa16.05■□□□□ 0.16
CKS2-201ENST00000314355 LRRC37AA6NMS7 1700 aa16.05■□□□□ 0.16
CKS2-201ENST00000314355 MED23Q9ULK4 1368 aa16.04■□□□□ 0.16
CKS2-201ENST00000314355 ZNF804BA4D1E1 1349 aa16.04■□□□□ 0.16
CKS2-201ENST00000314355 MYO3BQ8WXR4 1341 aa16.04■□□□□ 0.16
CKS2-201ENST00000314355 GRM8O00222 908 aa16.04■□□□□ 0.16
CKS2-201ENST00000314355 MMP14P50281 582 aa16.04■□□□□ 0.16
CKS2-201ENST00000314355 FMR1Q06787 632 aaKnown RBP eCLIP16.04■□□□□ 0.16
CKS2-201ENST00000314355 FAM161AQ3B820 660 aa16.04■□□□□ 0.16
CKS2-201ENST00000314355 LTBP1Q14766 1721 aa16.03■□□□□ 0.16
CKS2-201ENST00000314355 SHTN1A0MZ66 631 aa16.03■□□□□ 0.16
CKS2-201ENST00000314355 MAP2K2P36507 400 aa16.03■□□□□ 0.16
CKS2-201ENST00000314355 CASP7P55210 303 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms