RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 KLF18A0A0U1RQI7 1052 aa16.68■□□□□ 0.26
CSNK1D-202ENST00000314028 ALDH1L1O75891 902 aa16.68■□□□□ 0.26
CSNK1D-202ENST00000314028 THEMISQ8N1K5 641 aaPredicted RBP16.68■□□□□ 0.26
CSNK1D-202ENST00000314028 ZSCAN16Q9H4T2 348 aaPredicted RBP16.67■□□□□ 0.26
CSNK1D-202ENST00000314028 MTMR7Q9Y216 660 aa16.67■□□□□ 0.26
CSNK1D-202ENST00000314028 KIDINS220Q9ULH0 1771 aa16.67■□□□□ 0.26
CSNK1D-202ENST00000314028 NEXMIFQ5QGS0 1516 aa16.67■□□□□ 0.26
CSNK1D-202ENST00000314028 TATP17735 454 aaPredicted RBP16.67■□□□□ 0.26
CSNK1D-202ENST00000314028 KRT222Q8N1A0 295 aa16.67■□□□□ 0.26
CSNK1D-202ENST00000314028 SASH1O94885 1247 aa16.67■□□□□ 0.26
CSNK1D-202ENST00000314028 MRPS27Q92552 414 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-202ENST00000314028 ZNF594Q96JF6 807 aaPredicted RBP16.67■□□□□ 0.26
CSNK1D-202ENST00000314028 IGSF1Q8N6C5 1336 aa16.66■□□□□ 0.26
CSNK1D-202ENST00000314028 NECTIN1Q15223 517 aa16.66■□□□□ 0.26
CSNK1D-202ENST00000314028 CCDC144BQ3MJ40 725 aa16.66■□□□□ 0.26
CSNK1D-202ENST00000314028 MAP4K1Q92918 833 aa16.66■□□□□ 0.26
CSNK1D-202ENST00000314028 CCDC158Q5M9N0 1113 aa16.66■□□□□ 0.26
CSNK1D-202ENST00000314028 ALKQ9UM73 1620 aa16.66■□□□□ 0.26
CSNK1D-202ENST00000314028 CCDC66A2RUB6 948 aa16.66■□□□□ 0.26
CSNK1D-202ENST00000314028 RNMTO43148 476 aaKnown RBP16.66■□□□□ 0.26
CSNK1D-202ENST00000314028 AKAP4Q5JQC9 854 aa16.66■□□□□ 0.26
CSNK1D-202ENST00000314028 NUP133Q8WUM0 1156 aa16.66■□□□□ 0.26
CSNK1D-202ENST00000314028 USP27XA6NNY8 438 aa16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 CTAGE5O15320 804 aa16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 DHX16O60231 1041 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 CCDC57Q2TAC2 916 aa16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 ARHGAP29Q52LW3 1261 aa16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 TMCO3Q6UWJ1 677 aa16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 TM6SF1Q9BZW5 370 aa16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 GJB4Q9NTQ9 266 aa16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 PGBD1Q96JS3 809 aa16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 ARHGEF10O15013 1369 aa16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 SLU7O95391 586 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 IMMTQ16891 758 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 ERCC6LQ2NKX8 1250 aa16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 SPECC1Q5M775 1068 aa16.65■□□□□ 0.26
CSNK1D-202ENST00000314028 TCHHQ07283 1943 aa16.64■□□□□ 0.26
CSNK1D-202ENST00000314028 TOP1P11387 765 aaKnown RBP16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 POLA2Q14181 598 aa16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 DMTNQ08495 405 aa16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 GOLGA8FQ08AF8 430 aa16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 GOLGA8DPQ0D2H9 430 aa16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 AMOTQ4VCS5 1084 aa16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 DHX32Q7L7V1 743 aaKnown RBP16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 CABLES1Q8TDN4 633 aa16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 GTPBP4Q9BZE4 634 aaKnown RBP16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 OGFRQ9NZT2 677 aa16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 HECW2Q9P2P5 1572 aa16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 CRB1P82279 1406 aa16.64■□□□□ 0.25
CSNK1D-202ENST00000314028 GIGYF1O75420 1035 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-202ENST00000314028 CYP21A2P08686 494 aa16.63■□□□□ 0.25
CSNK1D-202ENST00000314028 NCBP1Q09161 790 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-202ENST00000314028 SCRN1Q12765 414 aa16.63■□□□□ 0.25
CSNK1D-202ENST00000314028 GPHNQ9NQX3 736 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-202ENST00000314028 AKAP17AQ02040 695 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-202ENST00000314028 TNNI3KQ59H18 835 aa16.63■□□□□ 0.25
CSNK1D-202ENST00000314028 FPGT-TNNI3KV9GXZ4 949 aa16.63■□□□□ 0.25
CSNK1D-202ENST00000314028 UBASH3AP57075 661 aa16.63■□□□□ 0.25
CSNK1D-202ENST00000314028 SAFBQ15424 915 aaKnown RBP eCLIP16.63■□□□□ 0.25
CSNK1D-202ENST00000314028 LRRC8AQ8IWT6 810 aa16.63■□□□□ 0.25
CSNK1D-202ENST00000314028 DBNLQ9UJU6 430 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-202ENST00000314028 TAF5LO75529 589 aa16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 LRRFIP1Q32MZ4 808 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 CCDC34Q96HJ3 373 aa16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 UTP14AQ9BVJ6 771 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 RNF216Q9NWF9 866 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 PAG1Q9NWQ8 432 aa16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 GNG11P61952 73 aa16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 XPO4Q9C0E2 1151 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 CNNM1Q9NRU3 951 aa16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 USP6P35125 1406 aa16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 PDIA4P13667 645 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 FAM160A1Q05DH4 1040 aa16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 KCNH5Q8NCM2 988 aa16.62■□□□□ 0.25
CSNK1D-202ENST00000314028 DDX21Q9NR30 783 aaKnown RBP eCLIP16.62■□□□□ 0.256e-8■■□□□ 13.9
CSNK1D-202ENST00000314028 SPTLC2O15270 562 aa16.61■□□□□ 0.25
CSNK1D-202ENST00000314028 GPTP24298 496 aa16.61■□□□□ 0.25
CSNK1D-202ENST00000314028 TOB2Q14106 344 aaPredicted RBP16.61■□□□□ 0.25
CSNK1D-202ENST00000314028 CNNM3Q8NE01 707 aa16.61■□□□□ 0.25
CSNK1D-202ENST00000314028 NOL10Q9BSC4 688 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-202ENST00000314028 MROH1Q8NDA8 1641 aa16.61■□□□□ 0.25
CSNK1D-202ENST00000314028 GCP02774 474 aa16.61■□□□□ 0.25
CSNK1D-202ENST00000314028 SYKP43405 635 aa16.61■□□□□ 0.25
CSNK1D-202ENST00000314028 ZNF397Q8NF99 534 aaPredicted RBP16.61■□□□□ 0.25
CSNK1D-202ENST00000314028 IP6K1Q92551 441 aa16.61■□□□□ 0.25
CSNK1D-202ENST00000314028 STRN4Q9NRL3 753 aa16.61■□□□□ 0.25
CSNK1D-202ENST00000314028 ZNF213O14771 459 aa16.6■□□□□ 0.25
CSNK1D-202ENST00000314028 NEMFO60524 1076 aa16.6■□□□□ 0.25
CSNK1D-202ENST00000314028 HMGB1P09429 215 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-202ENST00000314028 GSDMDP57764 484 aa16.6■□□□□ 0.25
CSNK1D-202ENST00000314028 EPHA10Q5JZY3 1008 aa16.6■□□□□ 0.25
CSNK1D-202ENST00000314028 SALL3Q9BXA9 1300 aa16.6■□□□□ 0.25
CSNK1D-202ENST00000314028 VWDEQ8N2E2 1590 aa16.6■□□□□ 0.25
CSNK1D-202ENST00000314028 KARSQ15046 597 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-202ENST00000314028 ZNF496Q96IT1 587 aaPredicted RBP16.6■□□□□ 0.25
CSNK1D-202ENST00000314028 ORAI2Q96SN7 254 aa16.6■□□□□ 0.25
CSNK1D-202ENST00000314028 FEZ1Q99689 392 aa16.6■□□□□ 0.25
CSNK1D-202ENST00000314028 GCKRQ14397 625 aa16.59■□□□□ 0.25
CSNK1D-202ENST00000314028 SPTLC3Q9NUV7 552 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms