RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 KRT9P35527 623 aa14.4□□□□□ -0.1
USP38-201ENST00000307017 DCAF17Q5H9S7 520 aaPredicted RBP14.4□□□□□ -0.1
USP38-201ENST00000307017 RBM26Q5T8P6 1007 aaKnown RBP14.4□□□□□ -0.1
USP38-201ENST00000307017 CTAGE15A4D2H0 777 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 CTAGE8P0CG41 777 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 TPD52P55327 224 aaPredicted RBP14.39□□□□□ -0.11
USP38-201ENST00000307017 CTAGE6Q86UF2 777 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 CTAGE4Q8IX94 777 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 MBIPQ9NS73 344 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 TMOD2Q9NZR1 351 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 AKAP2Q9Y2D5 859 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 SORBS3O60504 671 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 KRT24Q2M2I5 525 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 RRAGDQ9NQL2 400 aaPredicted RBP14.39□□□□□ -0.11
USP38-201ENST00000307017 RAPGEF1Q13905 1077 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 TTF1Q15361 905 aaPredicted RBP14.39□□□□□ -0.11
USP38-201ENST00000307017 PPP1R21Q6ZMI0 780 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 CCDC102BQ68D86 513 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 VTI1AQ96AJ9 217 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 CHPF2Q9P2E5 772 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 CTAGE9A4FU28 777 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 IRX3P78415 501 aaPredicted RBP14.39□□□□□ -0.11
USP38-201ENST00000307017 CCDC129Q6ZRS4 1044 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 CCDC121Q6ZUS5 278 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 CCDC155Q8N6L0 562 aa14.39□□□□□ -0.11
USP38-201ENST00000307017 CUX1P39880 1505 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 ANKRD18BA2A2Z9 1011 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 RASA3Q14644 834 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 SIRT1Q96EB6 747 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 TSNARE1Q96NA8 513 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 SH2B1Q9NRF2 756 aaPredicted RBP14.38□□□□□ -0.11
USP38-201ENST00000307017 DDX19AQ9NUU7 478 aaKnown RBP14.38□□□□□ -0.11
USP38-201ENST00000307017 NDUFB9Q9Y6M9 179 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 SLC4A4Q9Y6R1 1079 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 GSDMDP57764 484 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 IFIT1BQ5T764 474 aaKnown RBP14.38□□□□□ -0.11
USP38-201ENST00000307017 FANCD2Q9BXW9 1451 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 TTC36A6NLP5 189 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 ASIC1P78348 528 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 LDHAL6AQ6ZMR3 332 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 IQCGQ9H095 443 aaKnown RBP14.38□□□□□ -0.11
USP38-201ENST00000307017 SAP30BPQ9UHR5 308 aaKnown RBP14.38□□□□□ -0.11
USP38-201ENST00000307017 PCDHB15Q9Y5E8 787 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 A0A1B0GVL5 298 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 NAIPQ13075 1403 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 TSPY3P0CV98 308 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 TSPY8P0CW00 308 aa14.38□□□□□ -0.11
USP38-201ENST00000307017 TTC19Q6DKK2 380 aaPredicted RBP14.38□□□□□ -0.11
USP38-201ENST00000307017 MGARPQ8TDB4 240 aa14.37□□□□□ -0.11
USP38-201ENST00000307017 SCAPERQ9BY12 1400 aa14.37□□□□□ -0.11
USP38-201ENST00000307017 EIF6P56537 245 aaKnown RBP14.37□□□□□ -0.11
USP38-201ENST00000307017 DAAM2Q86T65 1068 aa14.37□□□□□ -0.11
USP38-201ENST00000307017 TBC1D32Q96NH3 1257 aa14.37□□□□□ -0.11
USP38-201ENST00000307017 KIF2AO00139 706 aaPredicted RBP14.37□□□□□ -0.11
USP38-201ENST00000307017 EVI5LQ96CN4 794 aa14.37□□□□□ -0.11
USP38-201ENST00000307017 RBM8AQ9Y5S9 174 aaKnown RBP14.37□□□□□ -0.11
USP38-201ENST00000307017 RTL1A6NKG5 1358 aa14.37□□□□□ -0.11
USP38-201ENST00000307017 VIMP08670 466 aaKnown RBP14.37□□□□□ -0.11
USP38-201ENST00000307017 CPLX4Q7Z7G2 160 aa14.37□□□□□ -0.11
USP38-201ENST00000307017 C6orf163Q5TEZ5 329 aa14.37□□□□□ -0.11
USP38-201ENST00000307017 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.37□□□□□ -0.11
USP38-201ENST00000307017 FOXO3O43524 673 aa14.37□□□□□ -0.11
USP38-201ENST00000307017 FAM173BQ6P4H8 233 aa14.37□□□□□ -0.11
USP38-201ENST00000307017 FNBP4Q8N3X1 1017 aaPredicted RBP14.37□□□□□ -0.11
USP38-201ENST00000307017 PPANQ9NQ55 473 aaKnown RBP14.37□□□□□ -0.11
USP38-201ENST00000307017 TBC1D7Q9P0N9 293 aa14.37□□□□□ -0.11
USP38-201ENST00000307017 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
USP38-201ENST00000307017 FCHSD2O94868 740 aa14.36□□□□□ -0.11
USP38-201ENST00000307017 PTPN21Q16825 1174 aa14.36□□□□□ -0.11
USP38-201ENST00000307017 PPP1R12CQ9BZL4 782 aa14.36□□□□□ -0.11
USP38-201ENST00000307017 PAXBP1Q9Y5B6 917 aa14.36□□□□□ -0.11
USP38-201ENST00000307017 NMIQ13287 307 aaPredicted RBP14.36□□□□□ -0.11
USP38-201ENST00000307017 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
USP38-201ENST00000307017 RIMBP2O15034 1052 aa14.36□□□□□ -0.11
USP38-201ENST00000307017 CTAGE5O15320 804 aa14.36□□□□□ -0.11
USP38-201ENST00000307017 RAD51AP2Q09MP3 1159 aa14.36□□□□□ -0.11
USP38-201ENST00000307017 DIXDC1Q155Q3 683 aa14.36□□□□□ -0.11
USP38-201ENST00000307017 COBLO75128 1261 aa14.36□□□□□ -0.11
USP38-201ENST00000307017 TYRO3Q06418 890 aa14.36□□□□□ -0.11
USP38-201ENST00000307017 ZWINTO95229 277 aa14.35□□□□□ -0.11
USP38-201ENST00000307017 CKAP4Q07065 602 aaKnown RBP14.35□□□□□ -0.11
USP38-201ENST00000307017 FAM114A2Q9NRY5 505 aa14.35□□□□□ -0.11
USP38-201ENST00000307017 SPAG5Q96R06 1193 aa14.35□□□□□ -0.11
USP38-201ENST00000307017 PPP1R12AO14974 1030 aaPredicted RBP14.35□□□□□ -0.11
USP38-201ENST00000307017 WTAPQ15007 396 aa14.35□□□□□ -0.11
USP38-201ENST00000307017 RPGRIP1LQ68CZ1 1315 aa14.35□□□□□ -0.11
USP38-201ENST00000307017 TBCAO75347 108 aaKnown RBP14.35□□□□□ -0.11
USP38-201ENST00000307017 KRT5P13647 590 aa14.35□□□□□ -0.11
USP38-201ENST00000307017 VPS16Q9H269 839 aa14.35□□□□□ -0.11
USP38-201ENST00000307017 CYP7A1P22680 504 aa14.35□□□□□ -0.11
USP38-201ENST00000307017 PPP1R7Q15435 360 aa14.35□□□□□ -0.11
USP38-201ENST00000307017 NCOA7Q8NI08 942 aa14.35□□□□□ -0.11
USP38-201ENST00000307017 CHMP2AO43633 222 aa14.35□□□□□ -0.11
USP38-201ENST00000307017 GOLGA1Q92805 767 aa14.35□□□□□ -0.11
USP38-201ENST00000307017 TACO1Q9BSH4 297 aaKnown RBP14.34□□□□□ -0.11
USP38-201ENST00000307017 CCDC174Q6PII3 467 aa14.34□□□□□ -0.11
USP38-201ENST00000307017 SPATA24Q86W54 205 aa14.34□□□□□ -0.11
USP38-201ENST00000307017 ZNF174Q15697 407 aa14.34□□□□□ -0.11
USP38-201ENST00000307017 ZRANB1Q9UGI0 708 aa14.34□□□□□ -0.11
USP38-201ENST00000307017 hCG_1642624A0A1W2PR95 340 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms