RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CCDC6Q16204 474 aa8.69□□□□□ -1.02
SF3B3-201ENST00000302516 CRACR2BQ8N4Y2 399 aaPredicted RBP8.69□□□□□ -1.02
SF3B3-201ENST00000302516 MINDY4BA8MYZ0 360 aa8.69□□□□□ -1.02
SF3B3-201ENST00000302516 GABPB1Q06547 395 aaPredicted RBP8.69□□□□□ -1.02
SF3B3-201ENST00000302516 SAMD15Q9P1V8 674 aa8.69□□□□□ -1.02
SF3B3-201ENST00000302516 POLR3AO14802 1390 aaPredicted RBP8.69□□□□□ -1.02
SF3B3-201ENST00000302516 ALDH3A1P30838 453 aa8.69□□□□□ -1.02
SF3B3-201ENST00000302516 PPP1R2P41236 205 aa8.69□□□□□ -1.02
SF3B3-201ENST00000302516 AOX1Q06278 1338 aa8.69□□□□□ -1.02
SF3B3-201ENST00000302516 MACROD2A1Z1Q3 448 aa8.69□□□□□ -1.02
SF3B3-201ENST00000302516 RSPH14Q9UHP6 348 aa8.69□□□□□ -1.02
SF3B3-201ENST00000302516 CNPY2Q9Y2B0 182 aa8.69□□□□□ -1.02
SF3B3-201ENST00000302516 ATP2A2P16615 1042 aaKnown RBP8.68□□□□□ -1.02
SF3B3-201ENST00000302516 GRIPAP1Q4V328 841 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 ZGPATQ8N5A5 531 aaKnown RBP8.68□□□□□ -1.02
SF3B3-201ENST00000302516 GNAQP50148 359 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 ANKLE2Q86XL3 938 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 KAT14Q9H8E8 782 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 CWC25Q9NXE8 425 aaPredicted RBP8.68□□□□□ -1.02
SF3B3-201ENST00000302516 FAM177BA6PVY3 158 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 PRPF4BQ13523 1007 aaKnown RBP8.68□□□□□ -1.02
SF3B3-201ENST00000302516 SEPT6Q14141 434 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 UQCRFS1P1P0C7P4 283 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 LIG1P18858 919 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 TNNC1P63316 161 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 RASSF4Q9H2L5 321 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 PRDM11Q9NQV5 511 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 TCOF1Q13428 1488 aaKnown RBP8.68□□□□□ -1.02
SF3B3-201ENST00000302516 BIN1O00499 593 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 KIF5AQ12840 1032 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 CROCCP2Q86T23 111 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 ABCF2Q9UG63 623 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 CCDC174Q6PII3 467 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 MYD88Q99836 296 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 ESYT1Q9BSJ8 1104 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 ABCC1P33527 1531 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 A0A1B0GUL7 405 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 NDC80O14777 642 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 GNAT2P19087 354 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 ZSCAN29Q8IWY8 852 aaPredicted RBP8.68□□□□□ -1.02
SF3B3-201ENST00000302516 SYCP3Q8IZU3 236 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 PIBF1Q8WXW3 757 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 DNAI1Q9UI46 699 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 NOL3O60936 208 aaKnown RBP8.68□□□□□ -1.02
SF3B3-201ENST00000302516 CALM1P0DP23 149 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 CALM2P0DP24 149 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 CALM3P0DP25 149 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 CALML3P27482 149 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 CCT2P78371 535 aaKnown RBP8.68□□□□□ -1.02
SF3B3-201ENST00000302516 BICDL1Q6ZP65 573 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 OTUD6BQ8N6M0 293 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 ERO1AQ96HE7 468 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 ANKIB1Q9P2G1 1089 aa8.68□□□□□ -1.02
SF3B3-201ENST00000302516 CPLX3Q8WVH0 158 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 CDC5LQ99459 802 aaKnown RBP8.67□□□□□ -1.02
SF3B3-201ENST00000302516 MTRF1LQ9UGC7 380 aaKnown RBP8.67□□□□□ -1.02
SF3B3-201ENST00000302516 ANAPC4Q9UJX5 808 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 NOS1P29475 1434 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 ZPR1O75312 459 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 SETDB1Q15047 1291 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 IPO4Q8TEX9 1081 aaKnown RBP8.67□□□□□ -1.02
SF3B3-201ENST00000302516 RRAGBQ5VZM2 374 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 GIMAP6Q6P9H5 292 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 PABPN1LA6NDY0 278 aaKnown RBP8.67□□□□□ -1.02
SF3B3-201ENST00000302516 WTAPQ15007 396 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 STIM2Q9P246 746 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 LACTBP83111 547 aaPredicted RBP8.67□□□□□ -1.02
SF3B3-201ENST00000302516 CCDC110Q8TBZ0 833 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 CRNKL1Q9BZJ0 848 aaKnown RBP8.67□□□□□ -1.02
SF3B3-201ENST00000302516 SHROOM2Q13796 1616 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 LDHCP07864 332 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 SDSP20132 328 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 SH3BGRP55822 239 aaPredicted RBP8.67□□□□□ -1.02
SF3B3-201ENST00000302516 MCM6Q14566 821 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 MICU3Q86XE3 530 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 MBIPQ9NS73 344 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 HDAC9Q9UKV0 1011 aa8.67□□□□□ -1.02
SF3B3-201ENST00000302516 ELP1O95163 1332 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 CCDC14Q49A88 953 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 GBP6Q6ZN66 633 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 KIAA1524Q8TCG1 905 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 IMPACTQ9P2X3 320 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 ZBTB43O43298 467 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 AOPEPQ8N6M6 819 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 IQCDQ96DY2 449 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 SLC26A6Q9BXS9 759 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 FANCAO15360 1455 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 A0A1B0GUA9 196 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 RTN1Q16799 776 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 MSANTD4Q8NCY6 345 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 ESR2Q92731 530 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 SPAG5Q96R06 1193 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 CPSF2Q9P2I0 782 aaKnown RBP8.66□□□□□ -1.02
SF3B3-201ENST00000302516 MAP3K2Q9Y2U5 619 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 TCERG1LQ5VWI1 586 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 SPINK5Q9NQ38 1064 aaPredicted RBP8.66□□□□□ -1.02
SF3B3-201ENST00000302516 KIAA0556O60303 1618 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 URB2Q14146 1524 aaKnown RBP8.66□□□□□ -1.02
SF3B3-201ENST00000302516 DNA2P51530 1060 aa8.66□□□□□ -1.02
SF3B3-201ENST00000302516 CYB5RLQ6IPT4 315 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms