RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 CD109Q6YHK3 1445 aa17.69■□□□□ 0.42
FNDC1-201ENST00000297267 ZNF354CQ86Y25 554 aa17.69■□□□□ 0.42
FNDC1-201ENST00000297267 RSPH14Q9UHP6 348 aa17.69■□□□□ 0.42
FNDC1-201ENST00000297267 HGSO14964 777 aaPredicted RBP17.69■□□□□ 0.42
FNDC1-201ENST00000297267 SLC9C2Q5TAH2 1124 aa17.69■□□□□ 0.42
FNDC1-201ENST00000297267 hCG_1642624A0A1W2PR95 340 aa17.69■□□□□ 0.42
FNDC1-201ENST00000297267 BMP2KLQ5H9B9 411 aa17.69■□□□□ 0.42
FNDC1-201ENST00000297267 CHAMP1Q96JM3 812 aa17.69■□□□□ 0.42
FNDC1-201ENST00000297267 MRVI1Q9Y6F6 885 aa17.69■□□□□ 0.42
FNDC1-201ENST00000297267 A0A1B0GVL5 298 aa17.68■□□□□ 0.42
FNDC1-201ENST00000297267 SYT1P21579 422 aa17.68■□□□□ 0.42
FNDC1-201ENST00000297267 MAP3K1Q13233 1512 aa17.68■□□□□ 0.42
FNDC1-201ENST00000297267 PPIP5K1Q6PFW1 1433 aa17.68■□□□□ 0.42
FNDC1-201ENST00000297267 USO1O60763 962 aaKnown RBP17.68■□□□□ 0.42
FNDC1-201ENST00000297267 GTF3C6Q969F1 213 aa17.68■□□□□ 0.42
FNDC1-201ENST00000297267 HMGB1P09429 215 aaKnown RBP17.68■□□□□ 0.42
FNDC1-201ENST00000297267 EIF4A2Q14240 407 aaKnown RBP17.68■□□□□ 0.42
FNDC1-201ENST00000297267 OTUD7BQ6GQQ9 843 aa17.68■□□□□ 0.42
FNDC1-201ENST00000297267 SMARCC1Q92922 1105 aaPredicted RBP17.68■□□□□ 0.42
FNDC1-201ENST00000297267 APBB1IPQ7Z5R6 666 aaPredicted RBP17.68■□□□□ 0.42
FNDC1-201ENST00000297267 SORBS3O60504 671 aa17.68■□□□□ 0.42
FNDC1-201ENST00000297267 KRT13P13646 458 aa17.68■□□□□ 0.42
FNDC1-201ENST00000297267 NF2P35240 595 aa17.68■□□□□ 0.42
FNDC1-201ENST00000297267 SYT10Q6XYQ8 523 aa17.68■□□□□ 0.42
FNDC1-201ENST00000297267 NCOA5Q9HCD5 579 aaKnown RBP17.68■□□□□ 0.42
FNDC1-201ENST00000297267 UBA7P41226 1012 aa17.67■□□□□ 0.42
FNDC1-201ENST00000297267 MAEAQ7L5Y9 396 aa17.67■□□□□ 0.42
FNDC1-201ENST00000297267 DDX19AQ9NUU7 478 aaKnown RBP17.67■□□□□ 0.42
FNDC1-201ENST00000297267 PAFAH1B1P43034 410 aa17.67■□□□□ 0.42
FNDC1-201ENST00000297267 WDR70Q9NW82 654 aa17.67■□□□□ 0.42
FNDC1-201ENST00000297267 ZBTB43O43298 467 aa17.67■□□□□ 0.42
FNDC1-201ENST00000297267 NBPF6Q5VWK0 638 aa17.67■□□□□ 0.42
FNDC1-201ENST00000297267 NBPF5PQ86XG9 351 aaPredicted RBP17.67■□□□□ 0.42
FNDC1-201ENST00000297267 ZNF526Q8TF50 670 aaPredicted RBP17.67■□□□□ 0.42
FNDC1-201ENST00000297267 NBPF4Q96M43 638 aa17.67■□□□□ 0.42
FNDC1-201ENST00000297267 TCP11L1Q9NUJ3 509 aa17.67■□□□□ 0.42
FNDC1-201ENST00000297267 F13A1P00488 732 aa17.67■□□□□ 0.42
FNDC1-201ENST00000297267 AMOTQ4VCS5 1084 aa17.67■□□□□ 0.42
FNDC1-201ENST00000297267 IFT81Q8WYA0 676 aa17.67■□□□□ 0.42
FNDC1-201ENST00000297267 GUCA1BQ9UMX6 200 aa17.67■□□□□ 0.42
FNDC1-201ENST00000297267 MCM5P33992 734 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 CCDC102BQ68D86 513 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 MYL10Q9BUA6 226 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 IFNKQ9P0W0 207 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 RTL1A6NKG5 1358 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 PIK3R4Q99570 1358 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 CCDC196A0A1B0GTZ2 297 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 POTEJP0CG39 1038 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 TXLNBQ8N3L3 684 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 RTN1Q16799 776 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 PPP4R3AQ6IN85 833 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 SELENOSQ9BQE4 189 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 CTNND2Q9UQB3 1225 aa17.66■□□□□ 0.42
FNDC1-201ENST00000297267 ZNF174Q15697 407 aa17.65■□□□□ 0.42
FNDC1-201ENST00000297267 PAG1Q9NWQ8 432 aa17.65■□□□□ 0.42
FNDC1-201ENST00000297267 PTPRKQ15262 1439 aa17.65■□□□□ 0.42
FNDC1-201ENST00000297267 PLEKHH1Q9ULM0 1364 aa17.65■□□□□ 0.42
FNDC1-201ENST00000297267 RPGRIP1LQ68CZ1 1315 aa17.65■□□□□ 0.42
FNDC1-201ENST00000297267 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
FNDC1-201ENST00000297267 COMMD10Q9Y6G5 202 aa17.65■□□□□ 0.42
FNDC1-201ENST00000297267 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
FNDC1-201ENST00000297267 SMC1AQ14683 1233 aaKnown RBP17.65■□□□□ 0.42
FNDC1-201ENST00000297267 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.65■□□□□ 0.42
FNDC1-201ENST00000297267 VPS18Q9P253 973 aa17.65■□□□□ 0.42
FNDC1-201ENST00000297267 SCAF11Q99590 1463 aaKnown RBP17.65■□□□□ 0.42
FNDC1-201ENST00000297267 EZRP15311 586 aaKnown RBP17.64■□□□□ 0.42
FNDC1-201ENST00000297267 ALS2CR12Q96Q35 445 aa17.64■□□□□ 0.42
FNDC1-201ENST00000297267 VEZTQ9HBM0 779 aa17.64■□□□□ 0.42
FNDC1-201ENST00000297267 MCMDC2Q4G0Z9 681 aa17.64■□□□□ 0.41
FNDC1-201ENST00000297267 NIP7Q9Y221 180 aaKnown RBP eCLIP17.64■□□□□ 0.41
FNDC1-201ENST00000297267 CREB3L3Q68CJ9 461 aa17.64■□□□□ 0.41
FNDC1-201ENST00000297267 IFNL2Q8IZJ0 200 aa17.64■□□□□ 0.41
FNDC1-201ENST00000297267 HINFPQ9BQA5 517 aa17.64■□□□□ 0.41
FNDC1-201ENST00000297267 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
FNDC1-201ENST00000297267 UBXN1Q04323 297 aa17.64■□□□□ 0.41
FNDC1-201ENST00000297267 CCDC91Q7Z6B0 441 aa17.64■□□□□ 0.41
FNDC1-201ENST00000297267 GADD45BO75293 160 aaPredicted RBP17.64■□□□□ 0.41
FNDC1-201ENST00000297267 NAPAP54920 295 aa17.64■□□□□ 0.41
FNDC1-201ENST00000297267 MAP9Q49MG5 647 aa17.64■□□□□ 0.41
FNDC1-201ENST00000297267 CMTR1Q8N1G2 835 aaKnown RBP17.64■□□□□ 0.41
FNDC1-201ENST00000297267 FNBP4Q8N3X1 1017 aaPredicted RBP17.64■□□□□ 0.41
FNDC1-201ENST00000297267 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
FNDC1-201ENST00000297267 ASIC1P78348 528 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 CEP85Q6P2H3 762 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 TSC1Q92574 1164 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 COBLO75128 1261 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 TYRO3Q06418 890 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 PDE4BQ07343 736 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 MAPKBP1O60336 1514 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 PTPROQ16827 1216 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 KLHL40Q2TBA0 621 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 CCDC25Q86WR0 208 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 ZNF569Q5MCW4 686 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 CABP5Q9NP86 173 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 HSF2BPO75031 334 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 PROCA1Q8NCQ7 364 aaPredicted RBP17.63■□□□□ 0.41
FNDC1-201ENST00000297267 RBSNQ9H1K0 784 aa17.63■□□□□ 0.41
FNDC1-201ENST00000297267 CTAGE5O15320 804 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 PTPN21Q16825 1174 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 UTP14AQ9BVJ6 771 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms