RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 TTC21AQ8NDW8 1320 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 GOLGA1Q92805 767 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 GPATCH3Q96I76 525 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 GDAP1L1Q96MZ0 367 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 BICC1Q9H694 974 aaKnown RBP11.79□□□□□ -0.52
CLDN1-201ENST00000295522 YY1AP1Q9H869 796 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 STAP2Q9UGK3 403 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 ZSCAN12O43309 604 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 GPR161Q8N6U8 529 aaKnown RBP11.79□□□□□ -0.52
CLDN1-201ENST00000295522 PSDA5PKW4 1024 aaPredicted RBP11.78□□□□□ -0.52
CLDN1-201ENST00000295522 H0YHG0 523 aa11.78□□□□□ -0.52
CLDN1-201ENST00000295522 GLRX3O76003 335 aaKnown RBP11.78□□□□□ -0.52
CLDN1-201ENST00000295522 POLR3DP05423 398 aaPredicted RBP11.78□□□□□ -0.52
CLDN1-201ENST00000295522 NBPF11Q86T75 865 aa11.78□□□□□ -0.52
CLDN1-201ENST00000295522 AACSQ86V21 672 aa11.78□□□□□ -0.52
CLDN1-201ENST00000295522 USP28Q96RU2 1077 aa11.78□□□□□ -0.52
CLDN1-201ENST00000295522 WDR24Q96S15 920 aa11.78□□□□□ -0.52
CLDN1-201ENST00000295522 CCDC8Q9H0W5 538 aaPredicted RBP11.78□□□□□ -0.52
CLDN1-201ENST00000295522 BOLA2Q9H3K6 86 aa11.78□□□□□ -0.52
CLDN1-201ENST00000295522 TAF6LQ9Y6J9 622 aa11.78□□□□□ -0.52
CLDN1-201ENST00000295522 ANKRD1Q15327 319 aa11.78□□□□□ -0.52
CLDN1-201ENST00000295522 CCDC91Q7Z6B0 441 aa11.78□□□□□ -0.52
CLDN1-201ENST00000295522 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
CLDN1-201ENST00000295522 ANKRD20A12PQ8NF67 263 aa11.78□□□□□ -0.52
CLDN1-201ENST00000295522 PI4K2BQ8TCG2 481 aa11.78□□□□□ -0.52
CLDN1-201ENST00000295522 MAP3K4Q9Y6R4 1608 aa11.77□□□□□ -0.52
CLDN1-201ENST00000295522 CHL1O00533 1208 aa11.77□□□□□ -0.52
CLDN1-201ENST00000295522 NMIQ13287 307 aaPredicted RBP11.77□□□□□ -0.52
CLDN1-201ENST00000295522 CCDC93Q567U6 631 aa11.77□□□□□ -0.52
CLDN1-201ENST00000295522 TXNDC2Q86VQ3 553 aa11.77□□□□□ -0.52
CLDN1-201ENST00000295522 DHX58Q96C10 678 aa11.77□□□□□ -0.52
CLDN1-201ENST00000295522 MYOM2P54296 1465 aa11.77□□□□□ -0.52
CLDN1-201ENST00000295522 PPRC1Q5VV67 1664 aaKnown RBP11.77□□□□□ -0.52
CLDN1-201ENST00000295522 SALL3Q9BXA9 1300 aa11.77□□□□□ -0.53
CLDN1-201ENST00000295522 WDHD1O75717 1129 aaPredicted RBP11.77□□□□□ -0.53
CLDN1-201ENST00000295522 ATP2B1P20020 1258 aa11.77□□□□□ -0.53
CLDN1-201ENST00000295522 MAP2K2P36507 400 aa11.77□□□□□ -0.53
CLDN1-201ENST00000295522 FANCCQ00597 558 aa11.77□□□□□ -0.53
CLDN1-201ENST00000295522 CT47A1Q5JQC4 288 aaPredicted RBP11.77□□□□□ -0.53
CLDN1-201ENST00000295522 AXDND1Q5T1B0 1012 aaPredicted RBP11.77□□□□□ -0.53
CLDN1-201ENST00000295522 CPLX3Q8WVH0 158 aa11.77□□□□□ -0.53
CLDN1-201ENST00000295522 PA2G4Q9UQ80 394 aaKnown RBP11.77□□□□□ -0.53
CLDN1-201ENST00000295522 CLGNO14967 610 aa11.77□□□□□ -0.53
CLDN1-201ENST00000295522 SLC27A2O14975 620 aa11.77□□□□□ -0.53
CLDN1-201ENST00000295522 ERLIN1O75477 346 aa11.77□□□□□ -0.53
CLDN1-201ENST00000295522 SLC3A2P08195 630 aaKnown RBP11.77□□□□□ -0.53
CLDN1-201ENST00000295522 FAM160A1Q05DH4 1040 aa11.77□□□□□ -0.53
CLDN1-201ENST00000295522 CNNM3Q8NE01 707 aa11.77□□□□□ -0.53
CLDN1-201ENST00000295522 BRMS1Q9HCU9 246 aa11.77□□□□□ -0.53
CLDN1-201ENST00000295522 FUT8Q9BYC5 575 aa11.76□□□□□ -0.53
CLDN1-201ENST00000295522 IRX2Q9BZI1 471 aaPredicted RBP11.76□□□□□ -0.53
CLDN1-201ENST00000295522 IMPACTQ9P2X3 320 aa11.76□□□□□ -0.53
CLDN1-201ENST00000295522 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
CLDN1-201ENST00000295522 ANXA1P04083 346 aa11.76□□□□□ -0.53
CLDN1-201ENST00000295522 KIF4BQ2VIQ3 1234 aa11.76□□□□□ -0.53
CLDN1-201ENST00000295522 ADKP55263 362 aaKnown RBP11.76□□□□□ -0.53
CLDN1-201ENST00000295522 CHMP4BP1P59074 171 aa11.76□□□□□ -0.53
CLDN1-201ENST00000295522 AKAP17AQ02040 695 aaKnown RBP11.76□□□□□ -0.53
CLDN1-201ENST00000295522 OTUD7BQ6GQQ9 843 aa11.76□□□□□ -0.53
CLDN1-201ENST00000295522 SEC62Q99442 399 aaKnown RBP11.76□□□□□ -0.53
CLDN1-201ENST00000295522 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
CLDN1-201ENST00000295522 PPP2R2CQ9Y2T4 447 aa11.76□□□□□ -0.53
CLDN1-201ENST00000295522 ABCC1P33527 1531 aa11.76□□□□□ -0.53
CLDN1-201ENST00000295522 PHLPP2Q6ZVD8 1323 aa11.75□□□□□ -0.53
CLDN1-201ENST00000295522 APOBRQ0VD83 1088 aa11.75□□□□□ -0.53
CLDN1-201ENST00000295522 Q6ZUG5 572 aa11.75□□□□□ -0.53
CLDN1-201ENST00000295522 C14orf37Q86TY3 774 aa11.75□□□□□ -0.53
CLDN1-201ENST00000295522 RAB11FIP4Q86YS3 637 aa11.75□□□□□ -0.53
CLDN1-201ENST00000295522 MRPS27Q92552 414 aaKnown RBP11.75□□□□□ -0.53
CLDN1-201ENST00000295522 ZNF396Q96N95 335 aaPredicted RBP11.75□□□□□ -0.53
CLDN1-201ENST00000295522 NCOA5Q9HCD5 579 aaKnown RBP11.75□□□□□ -0.53
CLDN1-201ENST00000295522 COL3A1P02461 1466 aaPredicted RBP11.75□□□□□ -0.53
CLDN1-201ENST00000295522 ATP7AQ04656 1500 aa11.75□□□□□ -0.53
CLDN1-201ENST00000295522 TDO2P48775 406 aa11.75□□□□□ -0.53
CLDN1-201ENST00000295522 SETQ01105 290 aaPredicted RBP11.75□□□□□ -0.53
CLDN1-201ENST00000295522 RBM43Q6ZSC3 357 aaKnown RBP11.75□□□□□ -0.53
CLDN1-201ENST00000295522 HDXQ7Z353 690 aa11.75□□□□□ -0.53
CLDN1-201ENST00000295522 USP44Q9H0E7 712 aa11.75□□□□□ -0.53
CLDN1-201ENST00000295522 OSBPL5Q9H0X9 879 aaPredicted RBP11.75□□□□□ -0.53
CLDN1-201ENST00000295522 FAM204AQ9H8W3 233 aa11.75□□□□□ -0.53
CLDN1-201ENST00000295522 TTC21BQ7Z4L5 1316 aa11.75□□□□□ -0.53
CLDN1-201ENST00000295522 NBPF7P0C2Y1 421 aaPredicted RBP11.74□□□□□ -0.53
CLDN1-201ENST00000295522 TEFQ10587 303 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 CXorf56Q9H5V9 222 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 PHAXQ9H814 394 aaKnown RBP11.74□□□□□ -0.53
CLDN1-201ENST00000295522 RPS6KB1P23443 525 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 RESTQ13127 1097 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 MTX1Q13505 466 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 LTV1Q96GA3 475 aaPredicted RBP11.74□□□□□ -0.53
CLDN1-201ENST00000295522 HINFPQ9BQA5 517 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 CENPHQ9H3R5 247 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 ESF1Q9H501 851 aaKnown RBP11.74□□□□□ -0.53
CLDN1-201ENST00000295522 ECHDC1Q9NTX5 307 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 QRICH2Q9H0J4 1663 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 PLEKHG2Q9H7P9 1386 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 NDUFA8P51970 172 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 CHST3Q7LGC8 479 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 ERC1Q8IUD2 1116 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 DPF2Q92785 391 aa11.74□□□□□ -0.53
CLDN1-201ENST00000295522 ATG3Q9NT62 314 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms