RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 CTIFO43310 598 aaKnown RBP22.58■■□□□ 1.2
LSM12-201ENST00000293406 PDCL2Q8N4E4 241 aa22.58■■□□□ 1.2
LSM12-201ENST00000293406 LLPHQ9BRT6 129 aaKnown RBP22.58■■□□□ 1.2
LSM12-201ENST00000293406 LRRC2Q9BYS8 371 aa22.58■■□□□ 1.2
LSM12-201ENST00000293406 CEBPZQ03701 1054 aaKnown RBP22.57■■□□□ 1.2
LSM12-201ENST00000293406 UBE3BQ7Z3V4 1068 aa22.57■■□□□ 1.2
LSM12-201ENST00000293406 NFATC2IPQ8NCF5 419 aa22.57■■□□□ 1.2
LSM12-201ENST00000293406 SMARCC2Q8TAQ2 1214 aa22.57■■□□□ 1.2
LSM12-201ENST00000293406 PRDM4Q9UKN5 801 aa22.57■■□□□ 1.2
LSM12-201ENST00000293406 C5P01031 1676 aa22.57■■□□□ 1.2
LSM12-201ENST00000293406 DDX46Q7L014 1031 aaKnown RBP22.57■■□□□ 1.2
LSM12-201ENST00000293406 C16orf45Q96MC5 204 aaPredicted RBP22.57■■□□□ 1.2
LSM12-201ENST00000293406 PRDM10Q9NQV6 1147 aa22.57■■□□□ 1.2
LSM12-201ENST00000293406 PFKFB2O60825 505 aa22.56■■□□□ 1.2
LSM12-201ENST00000293406 RABL6Q3YEC7 729 aaPredicted RBP22.56■■□□□ 1.2
LSM12-201ENST00000293406 RAPGEF4Q8WZA2 1011 aa22.56■■□□□ 1.2
LSM12-201ENST00000293406 ANKRD7Q92527 254 aa22.56■■□□□ 1.2
LSM12-201ENST00000293406 GOLGA6L19H0YKK7 550 aa22.56■■□□□ 1.2
LSM12-201ENST00000293406 HMGB1P09429 215 aaKnown RBP22.56■■□□□ 1.2
LSM12-201ENST00000293406 ZNF496Q96IT1 587 aaPredicted RBP22.56■■□□□ 1.2
LSM12-201ENST00000293406 CDC25BP30305 580 aa22.55■■□□□ 1.2
LSM12-201ENST00000293406 NAA16Q6N069 864 aaPredicted RBP22.55■■□□□ 1.2
LSM12-201ENST00000293406 ERBB3P21860 1342 aa22.55■■□□□ 1.2
LSM12-201ENST00000293406 KDM6AO15550 1401 aaPredicted RBP22.55■■□□□ 1.2
LSM12-201ENST00000293406 STOX1Q6ZVD7 989 aa22.54■■□□□ 1.2
LSM12-201ENST00000293406 KBTBD3Q8NAB2 608 aa22.54■■□□□ 1.2
LSM12-201ENST00000293406 CTAGE5O15320 804 aa22.54■■□□□ 1.2
LSM12-201ENST00000293406 ADD1P35611 737 aaKnown RBP22.54■■□□□ 1.2
LSM12-201ENST00000293406 CBX1P83916 185 aa22.54■■□□□ 1.2
LSM12-201ENST00000293406 DHX32Q7L7V1 743 aaKnown RBP22.54■■□□□ 1.2
LSM12-201ENST00000293406 LRP10Q7Z4F1 713 aa22.54■■□□□ 1.2
LSM12-201ENST00000293406 NSUN7Q8NE18 718 aaKnown RBP22.54■■□□□ 1.2
LSM12-201ENST00000293406 CACTINQ8WUQ7 758 aaKnown RBP22.54■■□□□ 1.2
LSM12-201ENST00000293406 PIP4K2AP48426 406 aaPredicted RBP22.53■■□□□ 1.2
LSM12-201ENST00000293406 IQCB1Q15051 598 aa22.53■■□□□ 1.2
LSM12-201ENST00000293406 CCAR1Q8IX12 1150 aaKnown RBP22.53■■□□□ 1.2
LSM12-201ENST00000293406 RCOR1Q9UKL0 485 aa22.53■■□□□ 1.2
LSM12-201ENST00000293406 USP16Q9Y5T5 823 aa22.53■■□□□ 1.2
LSM12-201ENST00000293406 SH3TC1Q8TE82 1336 aa22.53■■□□□ 1.2
LSM12-201ENST00000293406 A0A087WZG4 1122 aa22.53■■□□□ 1.2
LSM12-201ENST00000293406 SNRPA1P09661 255 aaKnown RBP22.53■■□□□ 1.2
LSM12-201ENST00000293406 TNNT1P13805 278 aa22.53■■□□□ 1.2
LSM12-201ENST00000293406 FOSBP53539 338 aa22.53■■□□□ 1.2
LSM12-201ENST00000293406 STX1AQ16623 288 aa22.53■■□□□ 1.2
LSM12-201ENST00000293406 SMTNL1A8MU46 457 aa22.52■■□□□ 1.2
LSM12-201ENST00000293406 PHKG2P15735 406 aa22.52■■□□□ 1.2
LSM12-201ENST00000293406 ATP2B3Q16720 1220 aa22.52■■□□□ 1.2
LSM12-201ENST00000293406 CCDC144BQ3MJ40 725 aa22.52■■□□□ 1.2
LSM12-201ENST00000293406 SARM1Q6SZW1 724 aa22.52■■□□□ 1.2
LSM12-201ENST00000293406 CCDC144CPQ8IYA2 1237 aa22.52■■□□□ 1.2
LSM12-201ENST00000293406 PTPDC1A2A3K4 754 aa22.52■■□□□ 1.2
LSM12-201ENST00000293406 ATP5J2-PTCD1G3V325 749 aa22.52■■□□□ 1.2
LSM12-201ENST00000293406 PTCD1O75127 700 aaKnown RBP22.52■■□□□ 1.2
LSM12-201ENST00000293406 C11orf57Q6ZUT1 292 aaPredicted RBP22.52■■□□□ 1.2
LSM12-201ENST00000293406 CCDC9Q9Y3X0 531 aaKnown RBP22.52■■□□□ 1.2
LSM12-201ENST00000293406 APOBRQ0VD83 1088 aa22.51■■□□□ 1.19
LSM12-201ENST00000293406 CCDC73Q6ZRK6 1079 aa22.51■■□□□ 1.19
LSM12-201ENST00000293406 TTC5Q8N0Z6 440 aa22.51■■□□□ 1.19
LSM12-201ENST00000293406 FTOQ9C0B1 505 aaKnown RBP eCLIP22.51■■□□□ 1.19
LSM12-201ENST00000293406 CTDNEP1O95476 244 aa22.51■■□□□ 1.19
LSM12-201ENST00000293406 TPD52L1Q16890 204 aaPredicted RBP22.51■■□□□ 1.19
LSM12-201ENST00000293406 NLRP2Q9NX02 1062 aa22.51■■□□□ 1.19
LSM12-201ENST00000293406 GOLPH3LQ9H4A5 285 aa22.5■■□□□ 1.19
LSM12-201ENST00000293406 PAXBP1Q9Y5B6 917 aa22.5■■□□□ 1.19
LSM12-201ENST00000293406 KINO60870 393 aaKnown RBP22.49■■□□□ 1.19
LSM12-201ENST00000293406 TATP17735 454 aaPredicted RBP22.49■■□□□ 1.19
LSM12-201ENST00000293406 ZC3H6P61129 1189 aaKnown RBP22.49■■□□□ 1.19
LSM12-201ENST00000293406 MRFAP1L1Q96HT8 127 aa22.49■■□□□ 1.19
LSM12-201ENST00000293406 ZNF396Q96N95 335 aaPredicted RBP22.49■■□□□ 1.19
LSM12-201ENST00000293406 USP28Q96RU2 1077 aa22.49■■□□□ 1.19
LSM12-201ENST00000293406 HELLSQ9NRZ9 838 aa22.49■■□□□ 1.19
LSM12-201ENST00000293406 SCN11AQ9UI33 1791 aa22.49■■□□□ 1.19
LSM12-201ENST00000293406 PALLDQ8WX93 1383 aa22.49■■□□□ 1.19
LSM12-201ENST00000293406 BECN2A8MW95 431 aa22.49■■□□□ 1.19
LSM12-201ENST00000293406 GOLIM4O00461 696 aa22.49■■□□□ 1.19
LSM12-201ENST00000293406 ZSCAN20P17040 1043 aaPredicted RBP22.49■■□□□ 1.19
LSM12-201ENST00000293406 CCT2P78371 535 aaKnown RBP22.49■■□□□ 1.19
LSM12-201ENST00000293406 ATL3Q6DD88 541 aa22.49■■□□□ 1.19
LSM12-201ENST00000293406 KRT28Q7Z3Y7 464 aa22.49■■□□□ 1.19
LSM12-201ENST00000293406 DSCC1Q9BVC3 393 aa22.49■■□□□ 1.19
LSM12-201ENST00000293406 SNW1Q13573 536 aaKnown RBP22.48■■□□□ 1.19
LSM12-201ENST00000293406 LMBR1LQ6UX01 489 aa22.48■■□□□ 1.19
LSM12-201ENST00000293406 LRRC8AQ8IWT6 810 aa22.48■■□□□ 1.19
LSM12-201ENST00000293406 PAG1Q9NWQ8 432 aa22.48■■□□□ 1.19
LSM12-201ENST00000293406 EXOSC10Q01780 885 aaKnown RBP22.48■■□□□ 1.19
LSM12-201ENST00000293406 DMTNQ08495 405 aa22.48■■□□□ 1.19
LSM12-201ENST00000293406 NCBP1Q09161 790 aaKnown RBP22.48■■□□□ 1.19
LSM12-201ENST00000293406 NEUROD6Q96NK8 337 aa22.48■■□□□ 1.19
LSM12-201ENST00000293406 AGXT2Q9BYV1 514 aa22.48■■□□□ 1.19
LSM12-201ENST00000293406 NAP1L2Q9ULW6 460 aaPredicted RBP22.48■■□□□ 1.19
LSM12-201ENST00000293406 AFDNP55196 1824 aaKnown RBP22.47■■□□□ 1.19
LSM12-201ENST00000293406 NEMFO60524 1076 aa22.47■■□□□ 1.19
LSM12-201ENST00000293406 CASP7P55210 303 aa22.47■■□□□ 1.19
LSM12-201ENST00000293406 SYCP1Q15431 976 aa22.47■■□□□ 1.19
LSM12-201ENST00000293406 SLFNL1Q499Z3 407 aa22.47■■□□□ 1.19
LSM12-201ENST00000293406 IFNL2Q8IZJ0 200 aa22.47■■□□□ 1.19
LSM12-201ENST00000293406 FMNL2Q96PY5 1086 aa22.47■■□□□ 1.19
LSM12-201ENST00000293406 RGPD5Q99666 1765 aa22.47■■□□□ 1.19
LSM12-201ENST00000293406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.47■■□□□ 1.19
LSM12-201ENST00000293406 FAM160A1Q05DH4 1040 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms