RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 RIOK3O14730 519 aaKnown RBP20.03■□□□□ 0.8
PCDHA13-201ENST00000289272 ALDH1L1O75891 902 aa20.03■□□□□ 0.8
PCDHA13-201ENST00000289272 TARBP1Q13395 1621 aaKnown RBP20.03■□□□□ 0.8
PCDHA13-201ENST00000289272 CACNA2D4Q7Z3S7 1137 aa20.03■□□□□ 0.8
PCDHA13-201ENST00000289272 PTPRTO14522 1441 aa20.03■□□□□ 0.8
PCDHA13-201ENST00000289272 TRMT112Q9UI30 125 aaKnown RBP20.03■□□□□ 0.8
PCDHA13-201ENST00000289272 ANXA1P04083 346 aa20.03■□□□□ 0.8
PCDHA13-201ENST00000289272 OTUD6BQ8N6M0 293 aa20.03■□□□□ 0.8
PCDHA13-201ENST00000289272 RAD50Q92878 1312 aa20.02■□□□□ 0.8
PCDHA13-201ENST00000289272 KRT83P78385 493 aa20.02■□□□□ 0.8
PCDHA13-201ENST00000289272 ATP2B2Q01814 1243 aa20.02■□□□□ 0.8
PCDHA13-201ENST00000289272 TFIP11Q9UBB9 837 aaKnown RBP20.02■□□□□ 0.8
PCDHA13-201ENST00000289272 BICDL1Q6ZP65 573 aa20.02■□□□□ 0.8
PCDHA13-201ENST00000289272 ANKS4BQ8N8V4 417 aa20.02■□□□□ 0.8
PCDHA13-201ENST00000289272 SSRP1Q08945 709 aaKnown RBP20.02■□□□□ 0.79
PCDHA13-201ENST00000289272 GBP6Q6ZN66 633 aa20.02■□□□□ 0.79
PCDHA13-201ENST00000289272 A0A1B0GUA9 196 aa20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 TICAM2Q86XR7 235 aa20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 TOM1O60784 492 aa20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 SYKP43405 635 aa20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 CCDC121Q6ZUS5 278 aa20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 TTF1Q15361 905 aaPredicted RBP20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 CDC5LQ99459 802 aaKnown RBP20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 DNAJC25Q9H1X3 360 aa20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 TTC41PQ6P2S7 1318 aa20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 RNF41Q9H4P4 317 aaPredicted RBP20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 CWC25Q9NXE8 425 aaPredicted RBP20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 TRIM35Q9UPQ4 493 aa20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 KDM5CP41229 1560 aa20.01■□□□□ 0.79
PCDHA13-201ENST00000289272 ADAMTS2O95450 1211 aa20■□□□□ 0.79
PCDHA13-201ENST00000289272 UBE3BQ7Z3V4 1068 aa20■□□□□ 0.79
PCDHA13-201ENST00000289272 RBM28Q9NW13 759 aaKnown RBP20■□□□□ 0.79
PCDHA13-201ENST00000289272 ZNF213O14771 459 aa20■□□□□ 0.79
PCDHA13-201ENST00000289272 AMPD3Q01432 767 aa20■□□□□ 0.79
PCDHA13-201ENST00000289272 MCM6Q14566 821 aa20■□□□□ 0.79
PCDHA13-201ENST00000289272 AOX1Q06278 1338 aa20■□□□□ 0.79
PCDHA13-201ENST00000289272 KRBA2Q6ZNG9 492 aa20■□□□□ 0.79
PCDHA13-201ENST00000289272 RSRC1Q96IZ7 334 aaKnown RBP20■□□□□ 0.79
PCDHA13-201ENST00000289272 VPS18Q9P253 973 aa20■□□□□ 0.79
PCDHA13-201ENST00000289272 FAM76AQ8TAV0 307 aa19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 CNKSR2Q8WXI2 1034 aa19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 RAB34Q9BZG1 259 aa19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 LRRC27Q9C0I9 530 aa19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 SOS1Q07889 1333 aaPredicted RBP19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 KRT24Q2M2I5 525 aa19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 MSL1Q68DK7 614 aa19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 ZSCAN29Q8IWY8 852 aaPredicted RBP19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 AOPEPQ8N6M6 819 aa19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 PPP1R1BQ9UD71 204 aaPredicted RBP19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 AKAP4Q5JQC9 854 aa19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 MAATS1Q7Z4T9 603 aa19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 C6orf163Q5TEZ5 329 aa19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 NAPBQ9H115 298 aa19.99■□□□□ 0.79
PCDHA13-201ENST00000289272 KSR2Q6VAB6 950 aa19.98■□□□□ 0.79
PCDHA13-201ENST00000289272 ELP1O95163 1332 aa19.98■□□□□ 0.79
PCDHA13-201ENST00000289272 SPECC1Q5M775 1068 aa19.98■□□□□ 0.79
PCDHA13-201ENST00000289272 ANKRD13DQ6ZTN6 518 aa19.98■□□□□ 0.79
PCDHA13-201ENST00000289272 GUCY1B3Q02153 619 aa19.98■□□□□ 0.79
PCDHA13-201ENST00000289272 C10orf67Q8IYJ2 551 aa19.98■□□□□ 0.79
PCDHA13-201ENST00000289272 ABCF2Q9UG63 623 aa19.98■□□□□ 0.79
PCDHA13-201ENST00000289272 TBX22Q9Y458 520 aa19.98■□□□□ 0.79
PCDHA13-201ENST00000289272 DNM1Q05193 864 aaKnown RBP19.97■□□□□ 0.79
PCDHA13-201ENST00000289272 CCDC178Q5BJE1 867 aa19.97■□□□□ 0.79
PCDHA13-201ENST00000289272 RPGRQ92834 1020 aaKnown RBP19.97■□□□□ 0.79
PCDHA13-201ENST00000289272 LMBRD1Q9NUN5 540 aa19.97■□□□□ 0.79
PCDHA13-201ENST00000289272 RTL1A6NKG5 1358 aa19.97■□□□□ 0.79
PCDHA13-201ENST00000289272 IL13P35225 146 aa19.97■□□□□ 0.79
PCDHA13-201ENST00000289272 C19orf44Q9H6X5 657 aa19.97■□□□□ 0.79
PCDHA13-201ENST00000289272 GOLGA8BA8MQT2 603 aa19.97■□□□□ 0.79
PCDHA13-201ENST00000289272 EDC4Q6P2E9 1401 aaKnown RBP19.97■□□□□ 0.79
PCDHA13-201ENST00000289272 TACC1O75410 805 aa19.97■□□□□ 0.79
PCDHA13-201ENST00000289272 KLHL10Q6JEL2 608 aa19.97■□□□□ 0.79
PCDHA13-201ENST00000289272 CCDC155Q8N6L0 562 aa19.97■□□□□ 0.79
PCDHA13-201ENST00000289272 ATP5J2-PTCD1G3V325 749 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 KRT86O43790 486 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 CCT2P78371 535 aaKnown RBP19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 HLTFQ14527 1009 aaKnown RBP eCLIP19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 ZBTB3Q9H5J0 574 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 JADE2Q9NQC1 790 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 KIF24Q5T7B8 1368 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 GRM8O00222 908 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 ATP8B1O43520 1251 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 LDHCP07864 332 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 CCDC129Q6ZRS4 1044 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 ATP10AO60312 1499 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 SYT10Q6XYQ8 523 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 POTEJP0CG39 1038 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 TTC14Q96N46 770 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 KDM5AP29375 1690 aaKnown RBP19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 MAP3K5Q99683 1374 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 USP5P45974 858 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 DNAJC21Q5F1R6 531 aaKnown RBP19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 BRAPQ7Z569 592 aa19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 ZCRB1Q8TBF4 217 aaKnown RBP19.96■□□□□ 0.79
PCDHA13-201ENST00000289272 DZIP1Q86YF9 867 aaKnown RBP19.95■□□□□ 0.78
PCDHA13-201ENST00000289272 AFAP1L1Q8TED9 768 aa19.95■□□□□ 0.78
PCDHA13-201ENST00000289272 EYA1Q99502 592 aa19.95■□□□□ 0.78
PCDHA13-201ENST00000289272 RBM8AQ9Y5S9 174 aaKnown RBP19.95■□□□□ 0.78
PCDHA13-201ENST00000289272 SLC12A7Q9Y666 1083 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms