RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 INTS3Q68E01 1043 aaKnown RBP8.18□□□□□ -1.1
CD44-204ENST00000279452 DPY19L2Q6NUT2 758 aa8.18□□□□□ -1.1
CD44-204ENST00000279452 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.18□□□□□ -1.1
CD44-204ENST00000279452 ZNF594Q96JF6 807 aaPredicted RBP8.18□□□□□ -1.1
CD44-204ENST00000279452 GPR101Q96P66 508 aaPredicted RBP8.18□□□□□ -1.1
CD44-204ENST00000279452 EYA3Q99504 573 aa8.18□□□□□ -1.1
CD44-204ENST00000279452 GGA1Q9UJY5 639 aa8.18□□□□□ -1.1
CD44-204ENST00000279452 LRRFIP2Q9Y608 721 aaKnown RBP8.18□□□□□ -1.1
CD44-204ENST00000279452 GJA3Q9Y6H8 435 aa8.18□□□□□ -1.1
CD44-204ENST00000279452 UTYO14607 1347 aa8.18□□□□□ -1.1
CD44-204ENST00000279452 XDHP47989 1333 aa8.18□□□□□ -1.1
CD44-204ENST00000279452 EIF6P56537 245 aaKnown RBP8.17□□□□□ -1.1
CD44-204ENST00000279452 WASHC4Q2M389 1173 aa8.17□□□□□ -1.1
CD44-204ENST00000279452 LDHAL6AQ6ZMR3 332 aa8.17□□□□□ -1.1
CD44-204ENST00000279452 C16orf71Q8IYS4 520 aaPredicted RBP8.17□□□□□ -1.1
CD44-204ENST00000279452 PANK1Q8TE04 598 aa8.17□□□□□ -1.1
CD44-204ENST00000279452 BSDC1Q9NW68 430 aaPredicted RBP8.17□□□□□ -1.1
CD44-204ENST00000279452 ZC3H4Q9UPT8 1303 aaKnown RBP8.17□□□□□ -1.1
CD44-204ENST00000279452 FER1L6Q2WGJ9 1857 aa8.17□□□□□ -1.1
CD44-204ENST00000279452 CHD4Q14839 1912 aa8.17□□□□□ -1.1
CD44-204ENST00000279452 LRRC37AA6NMS7 1700 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 GNAI2P04899 355 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 RLBP1P12271 317 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 TAF1P21675 1872 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 ATP2B4P23634 1241 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 CHRNDQ07001 517 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 KIAA2012Q0VF49 1180 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 DOK7Q18PE1 504 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 ANKRD44Q8N8A2 993 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 HELBQ8NG08 1087 aaPredicted RBP8.16□□□□□ -1.1
CD44-204ENST00000279452 KLHDC4Q8TBB5 520 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 TBC1D16Q8TBP0 767 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 SNED1Q8TER0 1413 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 FBXW7Q969H0 707 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 KAZALD1Q96I82 304 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 SPEF2Q9C093 1822 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 ZC3H12CQ9C0D7 883 aaKnown RBP8.16□□□□□ -1.1
CD44-204ENST00000279452 ANKRD2Q9GZV1 360 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 ZNF541Q9H0D2 1346 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 SIL1Q9H173 461 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 C1orf115Q9H7X2 142 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 DBNDD1Q9H9R9 158 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 POLLQ9UGP5 575 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 MINPP1Q9UNW1 487 aa8.16□□□□□ -1.1
CD44-204ENST00000279452 MYH3P11055 1940 aa8.15□□□□□ -1.1
CD44-204ENST00000279452 DUOX1Q9NRD9 1551 aa8.15□□□□□ -1.1
CD44-204ENST00000279452 GLTPD2A6NH11 291 aa8.15□□□□□ -1.1
CD44-204ENST00000279452 SRGAP3O43295 1099 aa8.15□□□□□ -1.1
CD44-204ENST00000279452 TAF5LO75529 589 aa8.15□□□□□ -1.1
CD44-204ENST00000279452 DDNO94850 711 aaPredicted RBP8.15□□□□□ -1.1
CD44-204ENST00000279452 RABL6Q3YEC7 729 aaPredicted RBP8.15□□□□□ -1.1
CD44-204ENST00000279452 METTL24Q5JXM2 366 aa8.15□□□□□ -1.1
CD44-204ENST00000279452 RTFDC1Q9BY42 306 aaPredicted RBP8.15□□□□□ -1.1
CD44-204ENST00000279452 RRAGCQ9HB90 399 aa8.15□□□□□ -1.1
CD44-204ENST00000279452 NMRK2Q9NPI5 230 aa8.15□□□□□ -1.1
CD44-204ENST00000279452 COG6Q9Y2V7 657 aa8.15□□□□□ -1.1
CD44-204ENST00000279452 ZNF804BA4D1E1 1349 aa8.14□□□□□ -1.11
CD44-204ENST00000279452 ECE2O60344 883 aa8.14□□□□□ -1.11
CD44-204ENST00000279452 RAD17O75943 681 aa8.14□□□□□ -1.11
CD44-204ENST00000279452 LMOD1P29536 600 aaPredicted RBP8.14□□□□□ -1.11
CD44-204ENST00000279452 PUS3Q9BZE2 481 aaKnown RBP8.14□□□□□ -1.11
CD44-204ENST00000279452 VPS33BQ9H267 617 aa8.14□□□□□ -1.11
CD44-204ENST00000279452 PODXL2Q9NZ53 605 aa8.14□□□□□ -1.11
CD44-204ENST00000279452 ZNRF3Q9ULT6 936 aa8.14□□□□□ -1.11
CD44-204ENST00000279452 COL4A5P29400 1685 aa8.14□□□□□ -1.11
CD44-204ENST00000279452 MED23Q9ULK4 1368 aa8.13□□□□□ -1.11
CD44-204ENST00000279452 MROH5Q6ZUA9 1318 aa8.13□□□□□ -1.11
CD44-204ENST00000279452 WTIPA6NIX2 430 aaPredicted RBP8.13□□□□□ -1.11
CD44-204ENST00000279452 FZD9O00144 591 aa8.13□□□□□ -1.11
CD44-204ENST00000279452 NPM3O75607 178 aaKnown RBP8.13□□□□□ -1.11
CD44-204ENST00000279452 KLRK1P26718 216 aa8.13□□□□□ -1.11
CD44-204ENST00000279452 OS9Q13438 667 aaPredicted RBP8.13□□□□□ -1.11
CD44-204ENST00000279452 MVPQ14764 893 aaKnown RBP8.13□□□□□ -1.11
CD44-204ENST00000279452 LRRC24Q50LG9 513 aa8.13□□□□□ -1.11
CD44-204ENST00000279452 CIAPIN1Q6FI81 312 aa8.13□□□□□ -1.11
CD44-204ENST00000279452 GPC2Q8N158 579 aa8.13□□□□□ -1.11
CD44-204ENST00000279452 DDX19BQ9UMR2 479 aa8.13□□□□□ -1.11
CD44-204ENST00000279452 PA2G4Q9UQ80 394 aaKnown RBP8.13□□□□□ -1.11
CD44-204ENST00000279452 LEMD3Q9Y2U8 911 aa8.13□□□□□ -1.11
CD44-204ENST00000279452 IQCA1LA6NCM1 817 aa8.12□□□□□ -1.11
CD44-204ENST00000279452 SNAP23O00161 211 aa8.12□□□□□ -1.11
CD44-204ENST00000279452 EYA2O00167 538 aa8.12□□□□□ -1.11
CD44-204ENST00000279452 VEGFAP15692 232 aaPredicted RBP8.12□□□□□ -1.11
CD44-204ENST00000279452 RRP1P56182 461 aaKnown RBP8.12□□□□□ -1.11
CD44-204ENST00000279452 CXCL9Q07325 125 aa8.12□□□□□ -1.11
CD44-204ENST00000279452 TNIP1Q15025 636 aa8.12□□□□□ -1.11
CD44-204ENST00000279452 EAPPQ56P03 285 aaPredicted RBP8.12□□□□□ -1.11
CD44-204ENST00000279452 C20orf194Q5TEA3 1177 aa8.12□□□□□ -1.11
CD44-204ENST00000279452 ZNF804AQ7Z570 1209 aa8.12□□□□□ -1.11
CD44-204ENST00000279452 VPS37DQ86XT2 251 aa8.12□□□□□ -1.11
CD44-204ENST00000279452 BCL11AQ9H165 835 aa8.12□□□□□ -1.11
CD44-204ENST00000279452 CHMP4BQ9H444 224 aaKnown RBP8.12□□□□□ -1.11
CD44-204ENST00000279452 SBF1O95248 1867 aa8.12□□□□□ -1.11
CD44-204ENST00000279452 YDJCA8MPS7 323 aa8.11□□□□□ -1.11
CD44-204ENST00000279452 PSMD14O00487 310 aa8.11□□□□□ -1.11
CD44-204ENST00000279452 ZBTB7BO15156 539 aaPredicted RBP8.11□□□□□ -1.11
CD44-204ENST00000279452 FRAT2O75474 233 aaPredicted RBP8.11□□□□□ -1.11
CD44-204ENST00000279452 GMPSP49915 693 aaPredicted RBP8.11□□□□□ -1.11
CD44-204ENST00000279452 PTPN12Q05209 780 aaKnown RBP8.11□□□□□ -1.11
CD44-204ENST00000279452 TXNRD3Q86VQ6 643 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms