RNA–Protein interactions for RNA: ENST00000275080.11

CD164-201, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-201ENST00000275080 ERC1Q8IUD2 1116 aa10.76□□□□□ -0.69
CD164-201ENST00000275080 CCDC82Q8N4S0 544 aa10.76□□□□□ -0.69
CD164-201ENST00000275080 PDCP20941 246 aa10.75□□□□□ -0.69
CD164-201ENST00000275080 TTC5Q8N0Z6 440 aa10.75□□□□□ -0.69
CD164-201ENST00000275080 KAT6BQ8WYB5 2073 aa10.75□□□□□ -0.69
CD164-201ENST00000275080 ZSCAN25Q6NSZ9 544 aa10.75□□□□□ -0.69
CD164-201ENST00000275080 PI16Q6UXB8 463 aa10.75□□□□□ -0.69
CD164-201ENST00000275080 TMEM87AQ8NBN3 555 aa10.75□□□□□ -0.69
CD164-201ENST00000275080 CHMP4CQ96CF2 233 aa10.75□□□□□ -0.69
CD164-201ENST00000275080 USP28Q96RU2 1077 aa10.75□□□□□ -0.69
CD164-201ENST00000275080 MAP7D2Q96T17 732 aa10.75□□□□□ -0.69
CD164-201ENST00000275080 SCAND2PQ9GZW5 306 aaPredicted RBP10.75□□□□□ -0.69
CD164-201ENST00000275080 RGPD8O14715 1765 aaPredicted RBP10.75□□□□□ -0.69
CD164-201ENST00000275080 NEURL1BA8MQ27 555 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 GOLGA8FQ08AF8 430 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 GOLGA8DPQ0D2H9 430 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 GCKRQ14397 625 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 ZRSR1Q15695 479 aaKnown RBP10.74□□□□□ -0.69
CD164-201ENST00000275080 ZNF790Q6PG37 636 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 STOX1Q6ZVD7 989 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 AOPEPQ8N6M6 819 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 LRRC37A3O60309 1634 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 AOX1Q06278 1338 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 SMC2O95347 1197 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 MARCKSP29966 332 aaPredicted RBP10.74□□□□□ -0.69
CD164-201ENST00000275080 PRIMPOLQ96LW4 560 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 PTPDC1A2A3K4 754 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 ATP2B1P20020 1258 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 TERF1P54274 439 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 TNNI3KQ59H18 835 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 FSIP1Q8NA03 581 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 GOLPH3LQ9H4A5 285 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 FPGT-TNNI3KV9GXZ4 949 aa10.74□□□□□ -0.69
CD164-201ENST00000275080 COL15A1P39059 1388 aa10.73□□□□□ -0.69
CD164-201ENST00000275080 SKILP12757 684 aa10.73□□□□□ -0.69
CD164-201ENST00000275080 ZNF75DP51815 510 aa10.73□□□□□ -0.69
CD164-201ENST00000275080 LRRC24Q50LG9 513 aa10.73□□□□□ -0.69
CD164-201ENST00000275080 PUS3Q9BZE2 481 aaKnown RBP10.73□□□□□ -0.69
CD164-201ENST00000275080 KINO60870 393 aaKnown RBP10.73□□□□□ -0.69
CD164-201ENST00000275080 CCDC73Q6ZRK6 1079 aa10.73□□□□□ -0.69
CD164-201ENST00000275080 CCDC112Q8NEF3 446 aa10.73□□□□□ -0.69
CD164-201ENST00000275080 DDX21Q9NR30 783 aaKnown RBP eCLIP10.73□□□□□ -0.69
CD164-201ENST00000275080 BABAM1Q9NWV8 329 aa10.73□□□□□ -0.69
CD164-201ENST00000275080 DENND2AQ9ULE3 1009 aa10.73□□□□□ -0.69
CD164-201ENST00000275080 NPHP3Q7Z494 1330 aa10.73□□□□□ -0.69
CD164-201ENST00000275080 ADAMTSL3P82987 1691 aa10.72□□□□□ -0.69
CD164-201ENST00000275080 A1BGP04217 495 aa10.72□□□□□ -0.69
CD164-201ENST00000275080 APPP05067 770 aa10.72□□□□□ -0.69
CD164-201ENST00000275080 PTPN12Q05209 780 aaKnown RBP10.72□□□□□ -0.69
CD164-201ENST00000275080 PDIA6Q15084 440 aa10.72□□□□□ -0.69
CD164-201ENST00000275080 PRDM4Q9UKN5 801 aa10.72□□□□□ -0.69
CD164-201ENST00000275080 SPECC1Q5M775 1068 aa10.72□□□□□ -0.69
CD164-201ENST00000275080 ZNF771Q7L3S4 317 aaPredicted RBP10.72□□□□□ -0.69
CD164-201ENST00000275080 GTF3C6Q969F1 213 aa10.72□□□□□ -0.69
CD164-201ENST00000275080 AIFM3Q96NN9 605 aa10.72□□□□□ -0.69
CD164-201ENST00000275080 CHD2O14647 1828 aaKnown RBP10.72□□□□□ -0.69
CD164-201ENST00000275080 ALDH1L1O75891 902 aa10.71□□□□□ -0.69
CD164-201ENST00000275080 LMOD1P29536 600 aaPredicted RBP10.71□□□□□ -0.69
CD164-201ENST00000275080 ANKRD1Q15327 319 aa10.71□□□□□ -0.69
CD164-201ENST00000275080 TTLL7Q6ZT98 887 aa10.71□□□□□ -0.69
CD164-201ENST00000275080 SYNE4Q8N205 404 aa10.71□□□□□ -0.69
CD164-201ENST00000275080 CLSTN2Q9H4D0 955 aa10.71□□□□□ -0.69
CD164-201ENST00000275080 MARF1Q9Y4F3 1742 aaKnown RBP10.71□□□□□ -0.69
CD164-201ENST00000275080 ERICH4A6NGS2 130 aa10.71□□□□□ -0.69
CD164-201ENST00000275080 TRERF1Q96PN7 1200 aa10.71□□□□□ -0.69
CD164-201ENST00000275080 TM6SF1Q9BZW5 370 aa10.71□□□□□ -0.69
CD164-201ENST00000275080 INCENPQ9NQS7 918 aa10.71□□□□□ -0.69
CD164-201ENST00000275080 ST7Q9NRC1 585 aa10.71□□□□□ -0.69
CD164-201ENST00000275080 ZSCAN20P17040 1043 aaPredicted RBP10.71□□□□□ -0.7
CD164-201ENST00000275080 MCMDC2Q4G0Z9 681 aa10.71□□□□□ -0.7
CD164-201ENST00000275080 UBE2Q2LH0YL09 131 aa10.7□□□□□ -0.7
CD164-201ENST00000275080 CEP135Q66GS9 1140 aa10.7□□□□□ -0.7
CD164-201ENST00000275080 SPTLC3Q9NUV7 552 aa10.7□□□□□ -0.7
CD164-201ENST00000275080 ZNF215Q9UL58 517 aaPredicted RBP10.7□□□□□ -0.7
CD164-201ENST00000275080 CCDC69A6NI79 296 aa10.7□□□□□ -0.7
CD164-201ENST00000275080 HIP1O00291 1037 aa10.7□□□□□ -0.7
CD164-201ENST00000275080 NCBP1Q09161 790 aaKnown RBP10.7□□□□□ -0.7
CD164-201ENST00000275080 MYL10Q9BUA6 226 aa10.7□□□□□ -0.7
CD164-201ENST00000275080 TOMM22Q9NS69 142 aa10.7□□□□□ -0.7
CD164-201ENST00000275080 DDX19AQ9NUU7 478 aaKnown RBP10.7□□□□□ -0.7
CD164-201ENST00000275080 CLIC4Q9Y696 253 aa10.7□□□□□ -0.7
CD164-201ENST00000275080 FAM208AQ9UK61 1670 aaKnown RBP10.7□□□□□ -0.7
CD164-201ENST00000275080 NWD1Q149M9 1564 aa10.7□□□□□ -0.7
CD164-201ENST00000275080 PXDNQ92626 1479 aa10.7□□□□□ -0.7
CD164-201ENST00000275080 CPLX1O14810 134 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 CTDNEP1O95476 244 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 IFIT1P09914 478 aaKnown RBP10.69□□□□□ -0.7
CD164-201ENST00000275080 RESTQ13127 1097 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 GNL2Q13823 731 aaKnown RBP10.69□□□□□ -0.7
CD164-201ENST00000275080 STK38Q15208 465 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 KRT28Q7Z3Y7 464 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 HOMER1Q86YM7 354 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 CREBRFQ8IUR6 639 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 CEMIPQ8WUJ3 1361 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 CABP4P57796 275 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 PTPN14Q15678 1187 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 DPCR1Q3MIW9 517 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 AMOTQ4VCS5 1084 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 TMC6Q7Z403 805 aa10.69□□□□□ -0.7
CD164-201ENST00000275080 PAG1Q9NWQ8 432 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms