RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 PLXNC1O60486 1568 aa17.01■□□□□ 0.31
PDPK1-201ENST00000268673 IFIT5Q13325 482 aaKnown RBP17.01■□□□□ 0.31
PDPK1-201ENST00000268673 PYCARDQ9ULZ3 195 aa17.01■□□□□ 0.31
PDPK1-201ENST00000268673 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
PDPK1-201ENST00000268673 FAM135BQ49AJ0 1406 aa17.01■□□□□ 0.31
PDPK1-201ENST00000268673 GOLIM4O00461 696 aa17.01■□□□□ 0.31
PDPK1-201ENST00000268673 MTHFSDQ2M296 383 aaKnown RBP17.01■□□□□ 0.31
PDPK1-201ENST00000268673 RSPH14Q9UHP6 348 aa17.01■□□□□ 0.31
PDPK1-201ENST00000268673 RPS6KB1P23443 525 aa17.01■□□□□ 0.31
PDPK1-201ENST00000268673 CHRNA2Q15822 529 aa17.01■□□□□ 0.31
PDPK1-201ENST00000268673 CENPHQ9H3R5 247 aa17.01■□□□□ 0.31
PDPK1-201ENST00000268673 OSBPL3Q9H4L5 887 aa17.01■□□□□ 0.31
PDPK1-201ENST00000268673 TTC37Q6PGP7 1564 aa17■□□□□ 0.31
PDPK1-201ENST00000268673 POLR1AO95602 1720 aaPredicted RBP17■□□□□ 0.31
PDPK1-201ENST00000268673 ANKRD24Q8TF21 1146 aa17■□□□□ 0.31
PDPK1-201ENST00000268673 CHPF2Q9P2E5 772 aa17■□□□□ 0.31
PDPK1-201ENST00000268673 KIAA0232Q92628 1395 aa17■□□□□ 0.31
PDPK1-201ENST00000268673 GOLGA6L7A0A1B0GV03 622 aa17■□□□□ 0.31
PDPK1-201ENST00000268673 IARSP41252 1262 aaKnown RBP17■□□□□ 0.31
PDPK1-201ENST00000268673 SYCP1Q15431 976 aa17■□□□□ 0.31
PDPK1-201ENST00000268673 ODF2Q5BJF6 829 aa17■□□□□ 0.31
PDPK1-201ENST00000268673 TRMT112Q9UI30 125 aaKnown RBP17■□□□□ 0.31
PDPK1-201ENST00000268673 ZBTB3Q9H5J0 574 aa17■□□□□ 0.31
PDPK1-201ENST00000268673 UHRF1BP1LA0JNW5 1464 aa16.99■□□□□ 0.31
PDPK1-201ENST00000268673 PPFIA3O75145 1194 aa16.99■□□□□ 0.31
PDPK1-201ENST00000268673 PTPDC1A2A3K4 754 aa16.99■□□□□ 0.31
PDPK1-201ENST00000268673 RBM5P52756 815 aaKnown RBP eCLIP16.99■□□□□ 0.31
PDPK1-201ENST00000268673 NCOA7Q8NI08 942 aa16.99■□□□□ 0.31
PDPK1-201ENST00000268673 ZRANB1Q9UGI0 708 aa16.99■□□□□ 0.31
PDPK1-201ENST00000268673 CROCC2H7BZ55 1655 aa16.99■□□□□ 0.31
PDPK1-201ENST00000268673 SSRP1Q08945 709 aaKnown RBP16.99■□□□□ 0.31
PDPK1-201ENST00000268673 CTAGE1Q96RT6 745 aa16.99■□□□□ 0.31
PDPK1-201ENST00000268673 PRM3Q9NNZ6 103 aa16.99■□□□□ 0.31
PDPK1-201ENST00000268673 MTMR6Q9Y217 621 aa16.99■□□□□ 0.31
PDPK1-201ENST00000268673 PAFAH1B1P43034 410 aa16.99■□□□□ 0.31
PDPK1-201ENST00000268673 C10orf67Q8IYJ2 551 aa16.99■□□□□ 0.31
PDPK1-201ENST00000268673 EHBP1Q8NDI1 1231 aa16.99■□□□□ 0.31
PDPK1-201ENST00000268673 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
PDPK1-201ENST00000268673 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 GOLGA8AA7E2F4 631 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 LRMPQ12912 555 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 KRBA2Q6ZNG9 492 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 DHX32Q7L7V1 743 aaKnown RBP16.98■□□□□ 0.31
PDPK1-201ENST00000268673 NGLY1Q96IV0 654 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 KLF18A0A0U1RQI7 1052 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 GRM8O00222 908 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 USO1O60763 962 aaKnown RBP16.98■□□□□ 0.31
PDPK1-201ENST00000268673 ZPR1O75312 459 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 ZNF215Q9UL58 517 aaPredicted RBP16.98■□□□□ 0.31
PDPK1-201ENST00000268673 SLC12A7Q9Y666 1083 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 CDC37L1Q7L3B6 337 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 BRAPQ7Z569 592 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 LLPHQ9BRT6 129 aaKnown RBP16.98■□□□□ 0.31
PDPK1-201ENST00000268673 VPS18Q9P253 973 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 CTAGE9A4FU28 777 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 ANXA1P04083 346 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 SOGA3Q5TF21 947 aa16.98■□□□□ 0.31
PDPK1-201ENST00000268673 SLC27A2O14975 620 aa16.97■□□□□ 0.31
PDPK1-201ENST00000268673 MYL5Q02045 173 aa16.97■□□□□ 0.31
PDPK1-201ENST00000268673 DDX46Q7L014 1031 aaKnown RBP16.97■□□□□ 0.31
PDPK1-201ENST00000268673 ZSCAN29Q8IWY8 852 aaPredicted RBP16.97■□□□□ 0.31
PDPK1-201ENST00000268673 KSR2Q6VAB6 950 aa16.97■□□□□ 0.31
PDPK1-201ENST00000268673 HDXQ7Z353 690 aa16.97■□□□□ 0.31
PDPK1-201ENST00000268673 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.97■□□□□ 0.31
PDPK1-201ENST00000268673 TTC21AQ8NDW8 1320 aa16.97■□□□□ 0.31
PDPK1-201ENST00000268673 METAP2P50579 478 aaKnown RBP eCLIP16.97■□□□□ 0.31
PDPK1-201ENST00000268673 IRX3P78415 501 aaPredicted RBP16.97■□□□□ 0.31
PDPK1-201ENST00000268673 CKAP4Q07065 602 aaKnown RBP16.97■□□□□ 0.31
PDPK1-201ENST00000268673 MRFAP1L1Q96HT8 127 aa16.97■□□□□ 0.31
PDPK1-201ENST00000268673 ZFP91Q96JP5 570 aaPredicted RBP16.97■□□□□ 0.31
PDPK1-201ENST00000268673 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
PDPK1-201ENST00000268673 MNAT1P51948 309 aa16.96■□□□□ 0.31
PDPK1-201ENST00000268673 TTC31Q49AM3 519 aaPredicted RBP16.96■□□□□ 0.31
PDPK1-201ENST00000268673 GPTP24298 496 aa16.96■□□□□ 0.31
PDPK1-201ENST00000268673 NBPF11Q86T75 865 aa16.96■□□□□ 0.31
PDPK1-201ENST00000268673 KRT18P05783 430 aaKnown RBP16.96■□□□□ 0.31
PDPK1-201ENST00000268673 LIG1P18858 919 aa16.96■□□□□ 0.31
PDPK1-201ENST00000268673 ATP5J2-PTCD1G3V325 749 aa16.96■□□□□ 0.31
PDPK1-201ENST00000268673 PPP2R3AQ06190 1150 aa16.96■□□□□ 0.31
PDPK1-201ENST00000268673 CAVIN4Q5BKX8 364 aa16.96■□□□□ 0.31
PDPK1-201ENST00000268673 GPATCH11Q8N954 259 aa16.96■□□□□ 0.31
PDPK1-201ENST00000268673 TAF4BQ92750 862 aa16.96■□□□□ 0.31
PDPK1-201ENST00000268673 TRPM1Q7Z4N2 1603 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 N4BP3O15049 544 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 TANGO6Q9C0B7 1094 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 ELP1O95163 1332 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 CDC42BPAQ5VT25 1732 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 SIRT2Q8IXJ6 389 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 BAG1Q99933 345 aaPredicted RBP16.95■□□□□ 0.3
PDPK1-201ENST00000268673 CARD6Q9BX69 1037 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 NSFL1CQ9UNZ2 370 aaKnown RBP16.95■□□□□ 0.3
PDPK1-201ENST00000268673 HMGB2P26583 209 aaKnown RBP16.95■□□□□ 0.3
PDPK1-201ENST00000268673 MARCKSP29966 332 aaPredicted RBP16.95■□□□□ 0.3
PDPK1-201ENST00000268673 CT47A1Q5JQC4 288 aaPredicted RBP16.95■□□□□ 0.3
PDPK1-201ENST00000268673 FKBP15Q5T1M5 1219 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 UBE3BQ7Z3V4 1068 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 LINS1Q8NG48 757 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 ALG1Q9BT22 464 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 A0A1B0GVL5 298 aa16.95■□□□□ 0.3
PDPK1-201ENST00000268673 SPAG1Q07617 926 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms