RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 CABLES1Q8TDN4 633 aa26.16■■□□□ 1.78
CDR2-201ENST00000268383 GUCY1B3Q02153 619 aa26.16■■□□□ 1.78
CDR2-201ENST00000268383 NCOA5Q9HCD5 579 aaKnown RBP26.16■■□□□ 1.78
CDR2-201ENST00000268383 KIF3AQ9Y496 699 aa26.16■■□□□ 1.78
CDR2-201ENST00000268383 APOBRQ0VD83 1088 aa26.15■■□□□ 1.78
CDR2-201ENST00000268383 LMBR1LQ6UX01 489 aa26.15■■□□□ 1.78
CDR2-201ENST00000268383 ALDH8A1Q9H2A2 487 aaPredicted RBP26.15■■□□□ 1.78
CDR2-201ENST00000268383 BCL2L12Q9HB09 334 aa26.15■■□□□ 1.78
CDR2-201ENST00000268383 ZNF165P49910 485 aa26.15■■□□□ 1.78
CDR2-201ENST00000268383 TIMM10P62072 90 aa26.15■■□□□ 1.78
CDR2-201ENST00000268383 ERCC4Q92889 916 aaPredicted RBP26.15■■□□□ 1.78
CDR2-201ENST00000268383 OVOS2A0A0G2JMS6 1433 aa26.14■■□□□ 1.78
CDR2-201ENST00000268383 GOLIM4O00461 696 aa26.14■■□□□ 1.78
CDR2-201ENST00000268383 MCMDC2Q4G0Z9 681 aa26.14■■□□□ 1.78
CDR2-201ENST00000268383 PHRF1Q9P1Y6 1649 aaKnown RBP26.14■■□□□ 1.77
CDR2-201ENST00000268383 GOLGA6L6A8MZA4 724 aa26.14■■□□□ 1.77
CDR2-201ENST00000268383 TRHP20396 242 aaPredicted RBP26.14■■□□□ 1.77
CDR2-201ENST00000268383 DDX19AQ9NUU7 478 aaKnown RBP26.14■■□□□ 1.77
CDR2-201ENST00000268383 CHRNA2Q15822 529 aa26.13■■□□□ 1.77
CDR2-201ENST00000268383 FBXW7Q969H0 707 aa26.13■■□□□ 1.77
CDR2-201ENST00000268383 TTC5Q8N0Z6 440 aa26.13■■□□□ 1.77
CDR2-201ENST00000268383 CSB-PGBD3P0DP91 1061 aa26.12■■□□□ 1.77
CDR2-201ENST00000268383 KRT32Q14532 448 aa26.12■■□□□ 1.77
CDR2-201ENST00000268383 C16orf45Q96MC5 204 aaPredicted RBP26.12■■□□□ 1.77
CDR2-201ENST00000268383 CTDNEP1O95476 244 aa26.11■■□□□ 1.77
CDR2-201ENST00000268383 GTF2F1P35269 517 aaKnown RBP eCLIP26.11■■□□□ 1.77
CDR2-201ENST00000268383 ZNF75DP51815 510 aa26.11■■□□□ 1.77
CDR2-201ENST00000268383 HAUS7Q99871 368 aa26.11■■□□□ 1.77
CDR2-201ENST00000268383 U3KPZ7 1027 aaPredicted RBP26.11■■□□□ 1.77
CDR2-201ENST00000268383 SLIT3O75094 1523 aa26.11■■□□□ 1.77
CDR2-201ENST00000268383 TATP17735 454 aaPredicted RBP26.11■■□□□ 1.77
CDR2-201ENST00000268383 CYP27B1O15528 508 aa26.1■■□□□ 1.77
CDR2-201ENST00000268383 SNRPA1P09661 255 aaKnown RBP26.1■■□□□ 1.77
CDR2-201ENST00000268383 CCDC144BQ3MJ40 725 aa26.1■■□□□ 1.77
CDR2-201ENST00000268383 C11orf57Q6ZUT1 292 aaPredicted RBP26.1■■□□□ 1.77
CDR2-201ENST00000268383 CCDC144CPQ8IYA2 1237 aa26.1■■□□□ 1.77
CDR2-201ENST00000268383 MEGF6O75095 1541 aa26.1■■□□□ 1.77
CDR2-201ENST00000268383 MRC1P22897 1456 aa26.1■■□□□ 1.77
CDR2-201ENST00000268383 ARID5BQ14865 1188 aa26.1■■□□□ 1.77
CDR2-201ENST00000268383 RBM43Q6ZSC3 357 aaKnown RBP26.1■■□□□ 1.77
CDR2-201ENST00000268383 ZNF594Q96JF6 807 aaPredicted RBP26.1■■□□□ 1.77
CDR2-201ENST00000268383 GOLPH3LQ9H4A5 285 aa26.1■■□□□ 1.77
CDR2-201ENST00000268383 ADD1P35611 737 aaKnown RBP26.09■■□□□ 1.77
CDR2-201ENST00000268383 MTERF4Q7Z6M4 381 aaKnown RBP26.09■■□□□ 1.77
CDR2-201ENST00000268383 NSUN7Q8NE18 718 aaKnown RBP26.09■■□□□ 1.77
CDR2-201ENST00000268383 AFDNP55196 1824 aaKnown RBP26.09■■□□□ 1.77
CDR2-201ENST00000268383 RABL6Q3YEC7 729 aaPredicted RBP26.08■■□□□ 1.77
CDR2-201ENST00000268383 PLA2G4DQ86XP0 818 aa26.08■■□□□ 1.77
CDR2-201ENST00000268383 CCDC94Q9BW85 323 aaPredicted RBP26.08■■□□□ 1.77
CDR2-201ENST00000268383 GPHNQ9NQX3 736 aaPredicted RBP26.08■■□□□ 1.77
CDR2-201ENST00000268383 PTPDC1A2A3K4 754 aa26.08■■□□□ 1.76
CDR2-201ENST00000268383 TTLL5Q6EMB2 1281 aa26.08■■□□□ 1.76
CDR2-201ENST00000268383 ZSCAN25Q6NSZ9 544 aa26.08■■□□□ 1.76
CDR2-201ENST00000268383 KBTBD3Q8NAB2 608 aa26.08■■□□□ 1.76
CDR2-201ENST00000268383 CBX1P83916 185 aa26.07■■□□□ 1.76
CDR2-201ENST00000268383 TDRD7Q8NHU6 1098 aaKnown RBP26.07■■□□□ 1.76
CDR2-201ENST00000268383 CACTINQ8WUQ7 758 aaKnown RBP26.07■■□□□ 1.76
CDR2-201ENST00000268383 USP28Q96RU2 1077 aa26.07■■□□□ 1.76
CDR2-201ENST00000268383 TPM3P06753 285 aa26.07■■□□□ 1.76
CDR2-201ENST00000268383 CCAR1Q8IX12 1150 aaKnown RBP26.07■■□□□ 1.76
CDR2-201ENST00000268383 IFNL2Q8IZJ0 200 aa26.07■■□□□ 1.76
CDR2-201ENST00000268383 CLIP2Q9UDT6 1046 aa26.07■■□□□ 1.76
CDR2-201ENST00000268383 CASP7P55210 303 aa26.06■■□□□ 1.76
CDR2-201ENST00000268383 LRRC24Q50LG9 513 aa26.06■■□□□ 1.76
CDR2-201ENST00000268383 PPP4R3BQ5MIZ7 849 aa26.06■■□□□ 1.76
CDR2-201ENST00000268383 PDIA4P13667 645 aaKnown RBP26.06■■□□□ 1.76
CDR2-201ENST00000268383 TTLL7Q6ZT98 887 aa26.06■■□□□ 1.76
CDR2-201ENST00000268383 LAMA4Q16363 1823 aa26.06■■□□□ 1.76
CDR2-201ENST00000268383 CHAF1AQ13111 956 aaPredicted RBP26.05■■□□□ 1.76
CDR2-201ENST00000268383 ATP2B3Q16720 1220 aa26.05■■□□□ 1.76
CDR2-201ENST00000268383 ATG9AQ7Z3C6 839 aa26.05■■□□□ 1.76
CDR2-201ENST00000268383 SMARCC2Q8TAQ2 1214 aa26.05■■□□□ 1.76
CDR2-201ENST00000268383 PAG1Q9NWQ8 432 aa26.05■■□□□ 1.76
CDR2-201ENST00000268383 SCN11AQ9UI33 1791 aa26.05■■□□□ 1.76
CDR2-201ENST00000268383 PFKFB2O60825 505 aa26.05■■□□□ 1.76
CDR2-201ENST00000268383 OTUD7BQ6GQQ9 843 aa26.05■■□□□ 1.76
CDR2-201ENST00000268383 DHX32Q7L7V1 743 aaKnown RBP26.05■■□□□ 1.76
CDR2-201ENST00000268383 RAB11FIP4Q86YS3 637 aa26.05■■□□□ 1.76
CDR2-201ENST00000268383 FMNL2Q96PY5 1086 aa26.05■■□□□ 1.76
CDR2-201ENST00000268383 FOXO4P98177 505 aa26.04■■□□□ 1.76
CDR2-201ENST00000268383 PROSER2Q86WR7 435 aaPredicted RBP26.04■■□□□ 1.76
CDR2-201ENST00000268383 SPDYE4A6NLX3 237 aa26.03■■□□□ 1.76
CDR2-201ENST00000268383 NBPF26B4DH59 902 aa26.03■■□□□ 1.76
CDR2-201ENST00000268383 NAA30Q147X3 362 aaPredicted RBP26.03■■□□□ 1.76
CDR2-201ENST00000268383 NBPF14Q5TI25 921 aa26.03■■□□□ 1.76
CDR2-201ENST00000268383 NBPF10Q6P3W6 841 aaKnown RBP26.03■■□□□ 1.76
CDR2-201ENST00000268383 NBPF15Q8N660 670 aa26.03■■□□□ 1.76
CDR2-201ENST00000268383 CFAP45Q9UL16 551 aa26.03■■□□□ 1.76
CDR2-201ENST00000268383 TAOK2Q9UL54 1235 aa26.03■■□□□ 1.76
CDR2-201ENST00000268383 ZSCAN16Q9H4T2 348 aaPredicted RBP26.03■■□□□ 1.76
CDR2-201ENST00000268383 ADAMTS7Q9UKP4 1686 aa26.03■■□□□ 1.76
CDR2-201ENST00000268383 E7EWF7 191 aa26.02■■□□□ 1.76
CDR2-201ENST00000268383 CABP4P57796 275 aa26.02■■□□□ 1.76
CDR2-201ENST00000268383 HSP90AB3PQ58FF7 597 aa26.02■■□□□ 1.76
CDR2-201ENST00000268383 PUS3Q9BZE2 481 aaKnown RBP26.02■■□□□ 1.76
CDR2-201ENST00000268383 HSPD1P10809 573 aaKnown RBP26.02■■□□□ 1.76
CDR2-201ENST00000268383 IQCB1Q15051 598 aa26.02■■□□□ 1.76
CDR2-201ENST00000268383 CCDC85AQ96PX6 553 aaPredicted RBP26.02■■□□□ 1.76
CDR2-201ENST00000268383 CAMTA1Q9Y6Y1 1673 aa26.02■■□□□ 1.76
CDR2-201ENST00000268383 HAND2P61296 217 aa26.01■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms