RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 TCP11L1Q9NUJ3 509 aa12.64□□□□□ -0.39
CHFR-201ENST00000266880 CCT6BQ92526 530 aa12.64□□□□□ -0.39
CHFR-201ENST00000266880 CCDC172P0C7W6 258 aa12.64□□□□□ -0.39
CHFR-201ENST00000266880 AMPD3Q01432 767 aa12.64□□□□□ -0.39
CHFR-201ENST00000266880 SULT6B1Q6IMI4 303 aa12.64□□□□□ -0.39
CHFR-201ENST00000266880 IFIT3O14879 490 aaKnown RBP12.64□□□□□ -0.39
CHFR-201ENST00000266880 CRACR2BQ8N4Y2 399 aaPredicted RBP12.64□□□□□ -0.39
CHFR-201ENST00000266880 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHFR-201ENST00000266880 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHFR-201ENST00000266880 BICDL2A1A5D9 508 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 ABTB2Q8N961 1025 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 MRRFQ96E11 262 aaKnown RBP12.63□□□□□ -0.39
CHFR-201ENST00000266880 ZKSCAN5Q9Y2L8 839 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 MRFAP1Q9Y605 127 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 PRPHP41219 470 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 PLCB3Q01970 1234 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 VPS52Q8N1B4 723 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 VCXQ9H320 206 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 VPS41P49754 854 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 MTRF1LQ9UGC7 380 aaKnown RBP12.63□□□□□ -0.39
CHFR-201ENST00000266880 COG7P83436 770 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 PHLDB2Q86SQ0 1253 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 MICAL1Q8TDZ2 1067 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 CTAGE1Q96RT6 745 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 STK38LQ9Y2H1 464 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 RIPOR2Q9Y4F9 1068 aa12.63□□□□□ -0.39
CHFR-201ENST00000266880 STAT6P42226 847 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 KLHL40Q2TBA0 621 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 SH2D4BQ5SQS7 431 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 CXorf38Q8TB03 319 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 PPP1R9BQ96SB3 815 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 RMND1Q9NWS8 449 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 UBA7P41226 1012 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 KANK3Q6NY19 840 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 AKAP2Q9Y2D5 859 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 PEX19P40855 299 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 TYRO3Q06418 890 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 SLC26A6Q9BXS9 759 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 EHMT1Q9H9B1 1298 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 SPATS2LQ9NUQ6 558 aaKnown RBP12.62□□□□□ -0.39
CHFR-201ENST00000266880 TMEM132EQ6IEE7 984 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 IRAK4Q9NWZ3 460 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 STXBP4Q6ZWJ1 553 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 MIS18AQ9NYP9 233 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 TXNDC16Q9P2K2 825 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
CHFR-201ENST00000266880 ARFGAP2Q8N6H7 521 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 WDR70Q9NW82 654 aa12.62□□□□□ -0.39
CHFR-201ENST00000266880 EVCP57679 992 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 TACC3Q9Y6A5 838 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 GOLGA6CA6NDK9 693 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 GOLGA6DP0CG33 693 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 GOLGA6AQ9NYA3 693 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 OPHN1O60890 802 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 ATP2A2P16615 1042 aaKnown RBP12.61□□□□□ -0.39
CHFR-201ENST00000266880 IGHMBP2P38935 993 aaKnown RBP12.61□□□□□ -0.39
CHFR-201ENST00000266880 NAA16Q6N069 864 aaPredicted RBP12.61□□□□□ -0.39
CHFR-201ENST00000266880 TBC1D9Q6ZT07 1266 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 TMEM87AQ8NBN3 555 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 PDCD7Q8N8D1 485 aaKnown RBP12.61□□□□□ -0.39
CHFR-201ENST00000266880 KIF1BPQ96EK5 621 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 NUCKS1Q9H1E3 243 aaKnown RBP12.61□□□□□ -0.39
CHFR-201ENST00000266880 SNX16P57768 344 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 LMBR1Q8WVP7 490 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 JAKMIP2Q96AA8 810 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 LMOD1P29536 600 aaPredicted RBP12.61□□□□□ -0.39
CHFR-201ENST00000266880 ATICP31939 592 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 GLRX3O76003 335 aaKnown RBP12.61□□□□□ -0.39
CHFR-201ENST00000266880 UBXN1Q04323 297 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 ERCC6LQ2NKX8 1250 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 DPH6Q7L8W6 267 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 FAM200AQ8TCP9 573 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 ATF3P18847 181 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 SESN3P58005 492 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 RNASE9P60153 205 aaKnown RBP12.61□□□□□ -0.39
CHFR-201ENST00000266880 IRX5P78411 483 aaPredicted RBP12.61□□□□□ -0.39
CHFR-201ENST00000266880 TMEM67Q5HYA8 995 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 C20orf194Q5TEA3 1177 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 ANKRD24Q8TF21 1146 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 SAMM50Q9Y512 469 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 CETN3O15182 167 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 PFDN1O60925 122 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 VAT1LQ9HCJ6 419 aa12.61□□□□□ -0.39
CHFR-201ENST00000266880 POLD1P28340 1107 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 GEN1Q17RS7 908 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 CCDC122Q5T0U0 273 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 TSHZ3Q63HK5 1081 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 HAND2P61296 217 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 ASIC1P78348 528 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 ELF2Q15723 593 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 BICDL1Q6ZP65 573 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 MUM1Q2TAK8 710 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 ZNF513Q8N8E2 541 aaPredicted RBP12.6□□□□□ -0.39
CHFR-201ENST00000266880 TMOD2Q9NZR1 351 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
CHFR-201ENST00000266880 RNF10Q8N5U6 811 aaKnown RBP12.6□□□□□ -0.39
CHFR-201ENST00000266880 DMTNQ08495 405 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms