RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 MCMDC2Q4G0Z9 681 aa15.9■□□□□ 0.14
VHL-201ENST00000256474 SCRN1Q12765 414 aa15.9■□□□□ 0.14
VHL-201ENST00000256474 MYRIPQ8NFW9 859 aa15.9■□□□□ 0.14
VHL-201ENST00000256474 IFIT1P09914 478 aaKnown RBP15.89■□□□□ 0.13
VHL-201ENST00000256474 NAA30Q147X3 362 aaPredicted RBP15.89■□□□□ 0.13
VHL-201ENST00000256474 LRRC24Q50LG9 513 aa15.89■□□□□ 0.13
VHL-201ENST00000256474 STRN4Q9NRL3 753 aa15.89■□□□□ 0.13
VHL-201ENST00000256474 PTPDC1A2A3K4 754 aa15.89■□□□□ 0.13
VHL-201ENST00000256474 SNRPA1P09661 255 aaKnown RBP15.89■□□□□ 0.13
VHL-201ENST00000256474 RXRAP19793 462 aa15.89■□□□□ 0.13
VHL-201ENST00000256474 CCDC144CPQ8IYA2 1237 aa15.89■□□□□ 0.13
VHL-201ENST00000256474 KINO60870 393 aaKnown RBP15.89■□□□□ 0.13
VHL-201ENST00000256474 HMGN5P82970 282 aaKnown RBP15.88■□□□□ 0.13
VHL-201ENST00000256474 NPHP3Q7Z494 1330 aa15.88■□□□□ 0.13
VHL-201ENST00000256474 FSIP1Q8NA03 581 aa15.88■□□□□ 0.13
VHL-201ENST00000256474 PUS3Q9BZE2 481 aaKnown RBP15.88■□□□□ 0.13
VHL-201ENST00000256474 PIK3C2AO00443 1686 aa15.88■□□□□ 0.13
VHL-201ENST00000256474 STOX1Q6ZVD7 989 aa15.88■□□□□ 0.13
VHL-201ENST00000256474 IFNL2Q8IZJ0 200 aa15.88■□□□□ 0.13
VHL-201ENST00000256474 GTF3C6Q969F1 213 aa15.88■□□□□ 0.13
VHL-201ENST00000256474 BCL2L12Q9HB09 334 aa15.88■□□□□ 0.13
VHL-201ENST00000256474 A0A1B0GVL5 298 aa15.87■□□□□ 0.13
VHL-201ENST00000256474 FUCA2Q9BTY2 467 aa15.87■□□□□ 0.13
VHL-201ENST00000256474 UBR1Q8IWV7 1749 aa15.87■□□□□ 0.13
VHL-201ENST00000256474 TNNT1P13805 278 aa15.87■□□□□ 0.13
VHL-201ENST00000256474 KRT32Q14532 448 aa15.87■□□□□ 0.13
VHL-201ENST00000256474 USP28Q96RU2 1077 aa15.87■□□□□ 0.13
VHL-201ENST00000256474 PAG1Q9NWQ8 432 aa15.87■□□□□ 0.13
VHL-201ENST00000256474 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
VHL-201ENST00000256474 CPLX1O14810 134 aa15.86■□□□□ 0.13
VHL-201ENST00000256474 PTPN21Q16825 1174 aa15.86■□□□□ 0.13
VHL-201ENST00000256474 PI16Q6UXB8 463 aa15.86■□□□□ 0.13
VHL-201ENST00000256474 DDX19AQ9NUU7 478 aaKnown RBP15.86■□□□□ 0.13
VHL-201ENST00000256474 PHKG2P15735 406 aa15.86■□□□□ 0.13
VHL-201ENST00000256474 ATF3P18847 181 aa15.86■□□□□ 0.13
VHL-201ENST00000256474 GNL2Q13823 731 aaKnown RBP15.86■□□□□ 0.13
VHL-201ENST00000256474 HSP90AA4PQ58FG1 418 aa15.86■□□□□ 0.13
VHL-201ENST00000256474 C11orf57Q6ZUT1 292 aaPredicted RBP15.86■□□□□ 0.13
VHL-201ENST00000256474 KIAA1524Q8TCG1 905 aa15.86■□□□□ 0.13
VHL-201ENST00000256474 MAP7D2Q96T17 732 aa15.86■□□□□ 0.13
VHL-201ENST00000256474 EPB41L2O43491 1005 aaKnown RBP15.86■□□□□ 0.13
VHL-201ENST00000256474 GPTP24298 496 aa15.86■□□□□ 0.13
VHL-201ENST00000256474 TOMM22Q9NS69 142 aa15.86■□□□□ 0.13
VHL-201ENST00000256474 TOM1L2Q6ZVM7 507 aa15.85■□□□□ 0.13
VHL-201ENST00000256474 PDCL2Q8N4E4 241 aa15.85■□□□□ 0.13
VHL-201ENST00000256474 HMG20BQ9P0W2 317 aa15.85■□□□□ 0.13
VHL-201ENST00000256474 USP42Q9H9J4 1324 aaKnown RBP15.85■□□□□ 0.13
VHL-201ENST00000256474 ATP5JP18859 108 aa15.85■□□□□ 0.13
VHL-201ENST00000256474 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.13
VHL-201ENST00000256474 PODXL2Q9NZ53 605 aa15.85■□□□□ 0.13
VHL-201ENST00000256474 CFAP45Q9UL16 551 aa15.85■□□□□ 0.13
VHL-201ENST00000256474 SMC2O95347 1197 aa15.85■□□□□ 0.13
VHL-201ENST00000256474 STK38Q15208 465 aa15.85■□□□□ 0.13
VHL-201ENST00000256474 CLSTN2Q9H4D0 955 aa15.85■□□□□ 0.13
VHL-201ENST00000256474 ERBB3P21860 1342 aa15.85■□□□□ 0.13
VHL-201ENST00000256474 ATP2B1P20020 1258 aa15.84■□□□□ 0.13
VHL-201ENST00000256474 CCDC82Q8N4S0 544 aa15.84■□□□□ 0.13
VHL-201ENST00000256474 AOPEPQ8N6M6 819 aa15.84■□□□□ 0.13
VHL-201ENST00000256474 COL15A1P39059 1388 aa15.84■□□□□ 0.13
VHL-201ENST00000256474 CYP27B1O15528 508 aa15.84■□□□□ 0.13
VHL-201ENST00000256474 TERF1P54274 439 aa15.84■□□□□ 0.13
VHL-201ENST00000256474 TTC39AQ5SRH9 613 aa15.84■□□□□ 0.13
VHL-201ENST00000256474 RGPD1P0DJD0 1748 aa15.83■□□□□ 0.13
VHL-201ENST00000256474 ZNF75DP51815 510 aa15.83■□□□□ 0.13
VHL-201ENST00000256474 CCDC144BQ3MJ40 725 aa15.83■□□□□ 0.13
VHL-201ENST00000256474 CACTINQ8WUQ7 758 aaKnown RBP15.83■□□□□ 0.13
VHL-201ENST00000256474 PRIMPOLQ96LW4 560 aa15.83■□□□□ 0.13
VHL-201ENST00000256474 PXDNLA1KZ92 1463 aa15.83■□□□□ 0.12
VHL-201ENST00000256474 KAT6BQ8WYB5 2073 aa15.83■□□□□ 0.12
VHL-201ENST00000256474 A0A1B0GUL7 405 aa15.83■□□□□ 0.12
VHL-201ENST00000256474 MARCKSP29966 332 aaPredicted RBP15.83■□□□□ 0.12
VHL-201ENST00000256474 DHX32Q7L7V1 743 aaKnown RBP15.83■□□□□ 0.12
VHL-201ENST00000256474 ZNF710Q8N1W2 664 aa15.83■□□□□ 0.12
VHL-201ENST00000256474 FAM89AQ96GI7 184 aa15.83■□□□□ 0.12
VHL-201ENST00000256474 ZBTB9Q96C00 473 aa15.83■□□□□ 0.12
VHL-201ENST00000256474 CEP126Q9P2H0 1117 aa15.83■□□□□ 0.12
VHL-201ENST00000256474 NWD1Q149M9 1564 aa15.82■□□□□ 0.12
VHL-201ENST00000256474 KBTBD3Q8NAB2 608 aa15.82■□□□□ 0.12
VHL-201ENST00000256474 ZNF609O15014 1411 aa15.82■□□□□ 0.12
VHL-201ENST00000256474 ADORA1P30542 326 aa15.82■□□□□ 0.12
VHL-201ENST00000256474 RESTQ13127 1097 aa15.82■□□□□ 0.12
VHL-201ENST00000256474 XRN1Q8IZH2 1706 aaKnown RBP15.82■□□□□ 0.12
VHL-201ENST00000256474 E7EWF7 191 aa15.82■□□□□ 0.12
VHL-201ENST00000256474 CCDC57Q2TAC2 916 aa15.82■□□□□ 0.12
VHL-201ENST00000256474 RALYLQ86SE5 291 aaKnown RBP15.82■□□□□ 0.12
VHL-201ENST00000256474 SYNE4Q8N205 404 aa15.82■□□□□ 0.12
VHL-201ENST00000256474 GOLPH3LQ9H4A5 285 aa15.82■□□□□ 0.12
VHL-201ENST00000256474 COPRSQ9NQ92 184 aa15.82■□□□□ 0.12
VHL-201ENST00000256474 GOLGA8BA8MQT2 603 aa15.81■□□□□ 0.12
VHL-201ENST00000256474 ZSCAN25Q6NSZ9 544 aa15.81■□□□□ 0.12
VHL-201ENST00000256474 KLF18A0A0U1RQI7 1052 aa15.81■□□□□ 0.12
VHL-201ENST00000256474 NSUN7Q8NE18 718 aaKnown RBP15.81■□□□□ 0.12
VHL-201ENST00000256474 CWC25Q9NXE8 425 aaPredicted RBP15.81■□□□□ 0.12
VHL-201ENST00000256474 FAM208AQ9UK61 1670 aaKnown RBP15.81■□□□□ 0.12
VHL-201ENST00000256474 IDH1O75874 414 aaKnown RBP15.81■□□□□ 0.12
VHL-201ENST00000256474 HSPD1P10809 573 aaKnown RBP15.81■□□□□ 0.12
VHL-201ENST00000256474 FAM177A1Q8N128 213 aaPredicted RBP15.8■□□□□ 0.12
VHL-201ENST00000256474 CCDC112Q8NEF3 446 aa15.8■□□□□ 0.12
VHL-201ENST00000256474 HAUS7Q99871 368 aa15.8■□□□□ 0.12
VHL-201ENST00000256474 PRDM11Q9NQV5 511 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms