RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 TAF1P21675 1872 aa23.57■■□□□ 1.36
SBDS-201ENST00000246868 NPR1P16066 1061 aa23.56■■□□□ 1.36
SBDS-201ENST00000246868 MX1P20591 662 aa23.56■■□□□ 1.36
SBDS-201ENST00000246868 GPATCH3Q96I76 525 aa23.56■■□□□ 1.36
SBDS-201ENST00000246868 CRAMP1Q96RY5 1269 aa23.56■■□□□ 1.36
SBDS-201ENST00000246868 OTUD7AQ8TE49 926 aaPredicted RBP23.55■■□□□ 1.36
SBDS-201ENST00000246868 EAF2Q96CJ1 260 aaPredicted RBP23.55■■□□□ 1.36
SBDS-201ENST00000246868 H0YIN7 160 aa23.55■■□□□ 1.36
SBDS-201ENST00000246868 SRGNP10124 158 aa23.55■■□□□ 1.36
SBDS-201ENST00000246868 PDE8BO95263 885 aa23.54■■□□□ 1.36
SBDS-201ENST00000246868 PDE1AP54750 535 aa23.54■■□□□ 1.36
SBDS-201ENST00000246868 MASTLQ96GX5 879 aa23.54■■□□□ 1.36
SBDS-201ENST00000246868 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.54■■□□□ 1.36
SBDS-201ENST00000246868 C10orf71Q711Q0 1435 aa23.53■■□□□ 1.36
SBDS-201ENST00000246868 BBOX1O75936 387 aa23.53■■□□□ 1.36
SBDS-201ENST00000246868 C2CD5Q86YS7 1000 aa23.53■■□□□ 1.36
SBDS-201ENST00000246868 ALDH1B1P30837 517 aa23.52■■□□□ 1.36
SBDS-201ENST00000246868 CHRNDQ07001 517 aa23.52■■□□□ 1.36
SBDS-201ENST00000246868 TMC4Q7Z404 712 aa23.52■■□□□ 1.36
SBDS-201ENST00000246868 VGLL2Q8N8G2 317 aa23.52■■□□□ 1.36
SBDS-201ENST00000246868 NEUROD6Q96NK8 337 aa23.52■■□□□ 1.36
SBDS-201ENST00000246868 CCDC8Q9H0W5 538 aaPredicted RBP23.52■■□□□ 1.36
SBDS-201ENST00000246868 OSBPL3Q9H4L5 887 aa23.52■■□□□ 1.36
SBDS-201ENST00000246868 STAP2Q9UGK3 403 aa23.52■■□□□ 1.36
SBDS-201ENST00000246868 COL4A1P02462 1669 aa23.52■■□□□ 1.36
SBDS-201ENST00000246868 AOX1Q06278 1338 aa23.52■■□□□ 1.36
SBDS-201ENST00000246868 SALL3Q9BXA9 1300 aa23.52■■□□□ 1.36
SBDS-201ENST00000246868 ZNF609O15014 1411 aa23.52■■□□□ 1.36
SBDS-201ENST00000246868 A0A1B0GUL7 405 aa23.51■■□□□ 1.35
SBDS-201ENST00000246868 PUM3Q15397 648 aaKnown RBP23.51■■□□□ 1.35
SBDS-201ENST00000246868 ATP2B3Q16720 1220 aa23.51■■□□□ 1.35
SBDS-201ENST00000246868 ANKRD2Q9GZV1 360 aa23.51■■□□□ 1.35
SBDS-201ENST00000246868 MINPP1Q9UNW1 487 aa23.51■■□□□ 1.35
SBDS-201ENST00000246868 TTC41PQ6P2S7 1318 aa23.51■■□□□ 1.35
SBDS-201ENST00000246868 ERC2O15083 957 aa23.5■■□□□ 1.35
SBDS-201ENST00000246868 STYK1Q6J9G0 422 aa23.5■■□□□ 1.35
SBDS-201ENST00000246868 HELBQ8NG08 1087 aaPredicted RBP23.5■■□□□ 1.35
SBDS-201ENST00000246868 ZNF622Q969S3 477 aaKnown RBP eCLIP23.5■■□□□ 1.35
SBDS-201ENST00000246868 ECHDC1Q9NTX5 307 aa23.5■■□□□ 1.35
SBDS-201ENST00000246868 COL11A2P13942 1736 aaPredicted RBP23.5■■□□□ 1.35
SBDS-201ENST00000246868 TIMM10P62072 90 aa23.49■■□□□ 1.35
SBDS-201ENST00000246868 LPIN2Q92539 896 aa23.49■■□□□ 1.35
SBDS-201ENST00000246868 SLC5A1P13866 664 aa23.48■■□□□ 1.35
SBDS-201ENST00000246868 GORABQ5T7V8 394 aa23.48■■□□□ 1.35
SBDS-201ENST00000246868 TLR7Q9NYK1 1049 aaKnown RBP23.48■■□□□ 1.35
SBDS-201ENST00000246868 DBNLQ9UJU6 430 aaKnown RBP23.48■■□□□ 1.35
SBDS-201ENST00000246868 TAF5LO75529 589 aa23.48■■□□□ 1.35
SBDS-201ENST00000246868 TTC22Q5TAA0 569 aa23.48■■□□□ 1.35
SBDS-201ENST00000246868 DBNDD2Q9BQY9 259 aa23.48■■□□□ 1.35
SBDS-201ENST00000246868 TMX4Q9H1E5 349 aaPredicted RBP23.48■■□□□ 1.35
SBDS-201ENST00000246868 PPEF1O14829 653 aaPredicted RBP23.47■■□□□ 1.35
SBDS-201ENST00000246868 GLRX3O76003 335 aaKnown RBP23.47■■□□□ 1.35
SBDS-201ENST00000246868 IFIT1P09914 478 aaKnown RBP23.47■■□□□ 1.35
SBDS-201ENST00000246868 BMP2KLQ5H9B9 411 aa23.47■■□□□ 1.35
SBDS-201ENST00000246868 CNKSR1Q969H4 720 aa23.47■■□□□ 1.35
SBDS-201ENST00000246868 KCNJ4P48050 445 aa23.46■■□□□ 1.35
SBDS-201ENST00000246868 TSHZ3Q63HK5 1081 aa23.46■■□□□ 1.35
SBDS-201ENST00000246868 XAGE2Q96GT9 111 aa23.46■■□□□ 1.35
SBDS-201ENST00000246868 ANKIB1Q9P2G1 1089 aa23.46■■□□□ 1.35
SBDS-201ENST00000246868 KIF13BQ9NQT8 1826 aa23.46■■□□□ 1.35
SBDS-201ENST00000246868 FGFR2P21802 821 aa23.45■■□□□ 1.34
SBDS-201ENST00000246868 CHRNA5P30532 468 aa23.45■■□□□ 1.34
SBDS-201ENST00000246868 UBE4AQ14139 1066 aa23.45■■□□□ 1.34
SBDS-201ENST00000246868 SGIP1Q9BQI5 828 aa23.45■■□□□ 1.34
SBDS-201ENST00000246868 SPON1Q9HCB6 807 aa23.45■■□□□ 1.34
SBDS-201ENST00000246868 A0A1B0GUL6 1792 aa23.45■■□□□ 1.34
SBDS-201ENST00000246868 CCDC158Q5M9N0 1113 aa23.44■■□□□ 1.34
SBDS-201ENST00000246868 SP8Q8IXZ3 490 aa23.44■■□□□ 1.34
SBDS-201ENST00000246868 PI4K2BQ8TCG2 481 aa23.44■■□□□ 1.34
SBDS-201ENST00000246868 ATP6V0A2Q9Y487 856 aa23.44■■□□□ 1.34
SBDS-201ENST00000246868 XDHP47989 1333 aa23.44■■□□□ 1.34
SBDS-201ENST00000246868 PTGER2P43116 358 aa23.43■■□□□ 1.34
SBDS-201ENST00000246868 TGFB2P61812 414 aa23.43■■□□□ 1.34
SBDS-201ENST00000246868 ATP5JP18859 108 aa23.42■■□□□ 1.34
SBDS-201ENST00000246868 ADORA1P30542 326 aa23.42■■□□□ 1.34
SBDS-201ENST00000246868 PPP1R1BQ9UD71 204 aaPredicted RBP23.42■■□□□ 1.34
SBDS-201ENST00000246868 GSPT1P15170 499 aaKnown RBP23.41■■□□□ 1.34
SBDS-201ENST00000246868 TTC39AQ5SRH9 613 aa23.41■■□□□ 1.34
SBDS-201ENST00000246868 LEMD3Q9Y2U8 911 aa23.41■■□□□ 1.34
SBDS-201ENST00000246868 ARAP2Q8WZ64 1704 aa23.41■■□□□ 1.34
SBDS-201ENST00000246868 DLEC1Q9Y238 1755 aa23.41■■□□□ 1.34
SBDS-201ENST00000246868 CACNA1SQ13698 1873 aa23.41■■□□□ 1.34
SBDS-201ENST00000246868 PRPF40BQ6NWY9 871 aaKnown RBP23.41■■□□□ 1.34
SBDS-201ENST00000246868 NSFL1CQ9UNZ2 370 aaKnown RBP23.41■■□□□ 1.34
SBDS-201ENST00000246868 CD2APQ9Y5K6 639 aa23.41■■□□□ 1.34
SBDS-201ENST00000246868 LRRC37AA6NMS7 1700 aa23.4■■□□□ 1.34
SBDS-201ENST00000246868 ZNF804BA4D1E1 1349 aa23.4■■□□□ 1.34
SBDS-201ENST00000246868 TRIM6-TRIM34B2RNG4 842 aa23.4■■□□□ 1.34
SBDS-201ENST00000246868 SNAP23O00161 211 aa23.4■■□□□ 1.34
SBDS-201ENST00000246868 A0A0G2JLW4 131 aa23.39■■□□□ 1.33
SBDS-201ENST00000246868 DPEP1P16444 411 aa23.39■■□□□ 1.33
SBDS-201ENST00000246868 ATP2B4P23634 1241 aa23.39■■□□□ 1.33
SBDS-201ENST00000246868 GPSM2P81274 684 aa23.39■■□□□ 1.33
SBDS-201ENST00000246868 KLHL34Q8N239 644 aa23.39■■□□□ 1.33
SBDS-201ENST00000246868 TTLL6Q8N841 843 aa23.39■■□□□ 1.33
SBDS-201ENST00000246868 GGA1Q9UJY5 639 aa23.39■■□□□ 1.33
SBDS-201ENST00000246868 CAVIN4Q5BKX8 364 aa23.38■■□□□ 1.33
SBDS-201ENST00000246868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.38■■□□□ 1.33
SBDS-201ENST00000246868 BOLA2Q9H3K6 86 aa23.38■■□□□ 1.33
SBDS-201ENST00000246868 PODXL2Q9NZ53 605 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms