RNA–Protein interactions for RNA: ENST00000243562.13

LTBP4-202, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 3,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-202ENST00000243562 CCT2P78371 535 aaKnown RBP16.69■□□□□ 0.26
LTBP4-202ENST00000243562 PTPN12Q05209 780 aaKnown RBP16.69■□□□□ 0.26
LTBP4-202ENST00000243562 PDCL2Q8N4E4 241 aa16.69■□□□□ 0.26
LTBP4-202ENST00000243562 ZNF496Q96IT1 587 aaPredicted RBP16.69■□□□□ 0.26
LTBP4-202ENST00000243562 COPRSQ9NQ92 184 aa16.69■□□□□ 0.26
LTBP4-202ENST00000243562 NFAT5O94916 1531 aa16.69■□□□□ 0.26
LTBP4-202ENST00000243562 USPL1Q5W0Q7 1092 aa16.69■□□□□ 0.26
LTBP4-202ENST00000243562 ZSCAN16Q9H4T2 348 aaPredicted RBP16.69■□□□□ 0.26
LTBP4-202ENST00000243562 SCRN1Q12765 414 aa16.68■□□□□ 0.26
LTBP4-202ENST00000243562 FBXW7Q969H0 707 aa16.68■□□□□ 0.26
LTBP4-202ENST00000243562 SLC52A2Q9HAB3 445 aa16.68■□□□□ 0.26
LTBP4-202ENST00000243562 RGPD2P0DJD1 1756 aa16.68■□□□□ 0.26
LTBP4-202ENST00000243562 BECN2A8MW95 431 aa16.68■□□□□ 0.26
LTBP4-202ENST00000243562 GUCY1B3Q02153 619 aa16.68■□□□□ 0.26
LTBP4-202ENST00000243562 TPD52L1Q16890 204 aaPredicted RBP16.68■□□□□ 0.26
LTBP4-202ENST00000243562 SLFNL1Q499Z3 407 aa16.68■□□□□ 0.26
LTBP4-202ENST00000243562 ZSCAN25Q6NSZ9 544 aa16.68■□□□□ 0.26
LTBP4-202ENST00000243562 CCAR1Q8IX12 1150 aaKnown RBP16.68■□□□□ 0.26
LTBP4-202ENST00000243562 TDRD7Q8NHU6 1098 aaKnown RBP16.68■□□□□ 0.26
LTBP4-202ENST00000243562 KIF13AQ9H1H9 1805 aa16.67■□□□□ 0.26
LTBP4-202ENST00000243562 CSB-PGBD3P0DP91 1061 aa16.67■□□□□ 0.26
LTBP4-202ENST00000243562 APOBRQ0VD83 1088 aa16.67■□□□□ 0.26
LTBP4-202ENST00000243562 SMAP1Q8IYB5 467 aaPredicted RBP16.67■□□□□ 0.26
LTBP4-202ENST00000243562 ZNF592Q92610 1267 aa16.67■□□□□ 0.26
LTBP4-202ENST00000243562 FTOQ9C0B1 505 aaKnown RBP eCLIP16.67■□□□□ 0.26
LTBP4-202ENST00000243562 COL15A1P39059 1388 aa16.67■□□□□ 0.26
LTBP4-202ENST00000243562 SPDYE4A6NLX3 237 aa16.67■□□□□ 0.26
LTBP4-202ENST00000243562 GOLIM4O00461 696 aa16.67■□□□□ 0.26
LTBP4-202ENST00000243562 TNNT1P13805 278 aa16.67■□□□□ 0.26
LTBP4-202ENST00000243562 LMBR1LQ6UX01 489 aa16.66■□□□□ 0.26
LTBP4-202ENST00000243562 CCDC73Q6ZRK6 1079 aa16.66■□□□□ 0.26
LTBP4-202ENST00000243562 KRT28Q7Z3Y7 464 aa16.66■□□□□ 0.26
LTBP4-202ENST00000243562 PLA2G4DQ86XP0 818 aa16.66■□□□□ 0.26
LTBP4-202ENST00000243562 TATP17735 454 aaPredicted RBP16.66■□□□□ 0.26
LTBP4-202ENST00000243562 SNRPA1P09661 255 aaKnown RBP16.65■□□□□ 0.26
LTBP4-202ENST00000243562 RFX5P48382 616 aaPredicted RBP16.65■□□□□ 0.26
LTBP4-202ENST00000243562 RBM43Q6ZSC3 357 aaKnown RBP16.65■□□□□ 0.26
LTBP4-202ENST00000243562 CHST3Q7LGC8 479 aa16.65■□□□□ 0.26
LTBP4-202ENST00000243562 HAUS7Q99871 368 aa16.65■□□□□ 0.26
LTBP4-202ENST00000243562 DHX32Q7L7V1 743 aaKnown RBP16.65■□□□□ 0.26
LTBP4-202ENST00000243562 CACTINQ8WUQ7 758 aaKnown RBP16.65■□□□□ 0.26
LTBP4-202ENST00000243562 NCOA5Q9HCD5 579 aaKnown RBP16.65■□□□□ 0.26
LTBP4-202ENST00000243562 ZNF609O15014 1411 aa16.65■□□□□ 0.26
LTBP4-202ENST00000243562 A0A087WWV3 80 aa16.65■□□□□ 0.26
LTBP4-202ENST00000243562 PTPDC1A2A3K4 754 aa16.65■□□□□ 0.26
LTBP4-202ENST00000243562 ME1P48163 572 aa16.65■□□□□ 0.26
LTBP4-202ENST00000243562 STOX1Q6ZVD7 989 aa16.65■□□□□ 0.26
LTBP4-202ENST00000243562 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.65■□□□□ 0.26
LTBP4-202ENST00000243562 KINO60870 393 aaKnown RBP16.64■□□□□ 0.25
LTBP4-202ENST00000243562 TIMM10P62072 90 aa16.64■□□□□ 0.25
LTBP4-202ENST00000243562 HMGB1P09429 215 aaKnown RBP16.64■□□□□ 0.25
LTBP4-202ENST00000243562 KBTBD3Q8NAB2 608 aa16.64■□□□□ 0.25
LTBP4-202ENST00000243562 LMO7Q8WWI1 1683 aa16.64■□□□□ 0.25
LTBP4-202ENST00000243562 PFKFB2O60825 505 aa16.63■□□□□ 0.25
LTBP4-202ENST00000243562 ATP2B3Q16720 1220 aa16.63■□□□□ 0.25
LTBP4-202ENST00000243562 CCDC144BQ3MJ40 725 aa16.63■□□□□ 0.25
LTBP4-202ENST00000243562 C11orf57Q6ZUT1 292 aaPredicted RBP16.63■□□□□ 0.25
LTBP4-202ENST00000243562 FILIP1Q7Z7B0 1213 aa16.63■□□□□ 0.25
LTBP4-202ENST00000243562 CCDC144CPQ8IYA2 1237 aa16.63■□□□□ 0.25
LTBP4-202ENST00000243562 NSUN7Q8NE18 718 aaKnown RBP16.63■□□□□ 0.25
LTBP4-202ENST00000243562 CAVIN2O95810 425 aa16.63■□□□□ 0.25
LTBP4-202ENST00000243562 PHKG2P15735 406 aa16.63■□□□□ 0.25
LTBP4-202ENST00000243562 STX1AQ16623 288 aa16.63■□□□□ 0.25
LTBP4-202ENST00000243562 ERCC4Q92889 916 aaPredicted RBP16.63■□□□□ 0.25
LTBP4-202ENST00000243562 ZNF396Q96N95 335 aaPredicted RBP16.63■□□□□ 0.25
LTBP4-202ENST00000243562 USP28Q96RU2 1077 aa16.63■□□□□ 0.25
LTBP4-202ENST00000243562 LLPHQ9BRT6 129 aaKnown RBP16.63■□□□□ 0.25
LTBP4-202ENST00000243562 PAG1Q9NWQ8 432 aa16.62■□□□□ 0.25
LTBP4-202ENST00000243562 CTAGE5O15320 804 aa16.62■□□□□ 0.25
LTBP4-202ENST00000243562 U2AF2P26368 475 aaKnown RBP eCLIP16.62■□□□□ 0.25
LTBP4-202ENST00000243562 IFNL2Q8IZJ0 200 aa16.62■□□□□ 0.25
LTBP4-202ENST00000243562 FSIP1Q8NA03 581 aa16.62■□□□□ 0.25
LTBP4-202ENST00000243562 CCDC112Q8NEF3 446 aa16.62■□□□□ 0.25
LTBP4-202ENST00000243562 SMARCC2Q8TAQ2 1214 aa16.62■□□□□ 0.25
LTBP4-202ENST00000243562 FMNL2Q96PY5 1086 aa16.62■□□□□ 0.25
LTBP4-202ENST00000243562 RCOR1Q9UKL0 485 aa16.62■□□□□ 0.25
LTBP4-202ENST00000243562 OVOS2A0A0G2JMS6 1433 aa16.62■□□□□ 0.25
LTBP4-202ENST00000243562 JCADQ9P266 1359 aa16.62■□□□□ 0.25
LTBP4-202ENST00000243562 ERBB3P21860 1342 aa16.62■□□□□ 0.25
LTBP4-202ENST00000243562 ARID5BQ14865 1188 aa16.61■□□□□ 0.25
LTBP4-202ENST00000243562 SDF4Q9BRK5 362 aa16.61■□□□□ 0.25
LTBP4-202ENST00000243562 NAA16Q6N069 864 aaPredicted RBP16.61■□□□□ 0.25
LTBP4-202ENST00000243562 IPO4Q8TEX9 1081 aaKnown RBP16.61■□□□□ 0.25
LTBP4-202ENST00000243562 GOLPH3LQ9H4A5 285 aa16.61■□□□□ 0.25
LTBP4-202ENST00000243562 TAOK2Q9UL54 1235 aa16.61■□□□□ 0.25
LTBP4-202ENST00000243562 A0A0G2JLW4 131 aa16.61■□□□□ 0.25
LTBP4-202ENST00000243562 CTDNEP1O95476 244 aa16.61■□□□□ 0.25
LTBP4-202ENST00000243562 SF3A1Q15459 793 aaKnown RBP16.61■□□□□ 0.25
LTBP4-202ENST00000243562 ZRSR1Q15695 479 aaKnown RBP16.61■□□□□ 0.25
LTBP4-202ENST00000243562 USP54Q70EL1 1684 aa16.6■□□□□ 0.25
LTBP4-202ENST00000243562 SMTNL1A8MU46 457 aa16.6■□□□□ 0.25
LTBP4-202ENST00000243562 CABP4P57796 275 aa16.6■□□□□ 0.25
LTBP4-202ENST00000243562 IQCB1Q15051 598 aa16.6■□□□□ 0.25
LTBP4-202ENST00000243562 RABL6Q3YEC7 729 aaPredicted RBP16.6■□□□□ 0.25
LTBP4-202ENST00000243562 ADD1P35611 737 aaKnown RBP16.6■□□□□ 0.25
LTBP4-202ENST00000243562 ZHX1Q9UKY1 873 aaPredicted RBP16.6■□□□□ 0.25
LTBP4-202ENST00000243562 E7EWF7 191 aa16.59■□□□□ 0.25
LTBP4-202ENST00000243562 LRRC8AQ8IWT6 810 aa16.59■□□□□ 0.25
LTBP4-202ENST00000243562 ANO10Q9NW15 660 aa16.59■□□□□ 0.25
LTBP4-202ENST00000243562 CTIFO43310 598 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms