RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 PSMA5P28066 241 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 PTPN12Q05209 780 aaKnown RBP14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 SNW1Q13573 536 aaKnown RBP14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 ANO6Q4KMQ2 910 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 PLEKHO1Q53GL0 409 aaPredicted RBP14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 KCNH5Q8NCM2 988 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 NEUROD6Q96NK8 337 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 KIF3AQ9Y496 699 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 ATP5JP18859 108 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 CCDC144BQ3MJ40 725 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 STOX1Q6ZVD7 989 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 CCDC144CPQ8IYA2 1237 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 GPATCH3Q96I76 525 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 SCAND2PQ9GZW5 306 aaPredicted RBP14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 ZNF75DP51815 510 aa14.15□□□□□ -0.14
SEC61A1-201ENST00000243253 GCKRQ14397 625 aa14.15□□□□□ -0.14
SEC61A1-201ENST00000243253 ANKRD1Q15327 319 aa14.15□□□□□ -0.14
SEC61A1-201ENST00000243253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.15□□□□□ -0.14
SEC61A1-201ENST00000243253 ILDR1Q86SU0 546 aaPredicted RBP14.15□□□□□ -0.14
SEC61A1-201ENST00000243253 CDC25BP30305 580 aa14.15□□□□□ -0.14
SEC61A1-201ENST00000243253 LRMPQ12912 555 aa14.15□□□□□ -0.14
SEC61A1-201ENST00000243253 BLOC1S2Q6QNY1 142 aa14.15□□□□□ -0.14
SEC61A1-201ENST00000243253 CYP21A2P08686 494 aa14.15□□□□□ -0.14
SEC61A1-201ENST00000243253 ZSCAN25Q6NSZ9 544 aa14.15□□□□□ -0.14
SEC61A1-201ENST00000243253 RAB11FIP4Q86YS3 637 aa14.15□□□□□ -0.14
SEC61A1-201ENST00000243253 PDCP20941 246 aa14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 DMTNQ08495 405 aa14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 UTP14CQ5TAP6 766 aaKnown RBP14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 SARM1Q6SZW1 724 aa14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 PROSER2Q86WR7 435 aaPredicted RBP14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 HSP90B1P14625 803 aaKnown RBP14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 SCRN1Q12765 414 aa14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 SLFNL1Q499Z3 407 aa14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 STK11IPQ8N1F8 1099 aa14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 SPC24Q8NBT2 197 aa14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 ENGASEQ8NFI3 743 aa14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 FSD1Q9BTV5 496 aa14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 DDX19AQ9NUU7 478 aaKnown RBP14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 GCP02774 474 aa14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 CKAP2LQ8IYA6 745 aa14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 TFIP11Q9UBB9 837 aaKnown RBP14.14□□□□□ -0.15
SEC61A1-201ENST00000243253 MEGF6O75095 1541 aa14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 DDX11Q96FC9 970 aa14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 USP16Q9Y5T5 823 aa14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 SHANK3Q9BYB0 1731 aa14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 PALLDQ8WX93 1383 aa14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 MYH7P12883 1935 aa14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 NCBP1Q09161 790 aaKnown RBP14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 GOLPH3LQ9H4A5 285 aa14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 GOLGB1Q14789 3259 aaKnown RBP14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 EXOSC10Q01780 885 aaKnown RBP14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 SYCP1Q15431 976 aa14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 STRN4Q9NRL3 753 aa14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 KCND1Q9NSA2 647 aa14.13□□□□□ -0.15
SEC61A1-201ENST00000243253 G3BP1Q13283 466 aaKnown RBP eCLIP14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 TNNI3KQ59H18 835 aa14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 CCDC186Q7Z3E2 898 aa14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 NFATC2IPQ8NCF5 419 aa14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 CACTINQ8WUQ7 758 aaKnown RBP14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 SPATA32Q96LK8 384 aa14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 SEC62Q99442 399 aaKnown RBP14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 MYD88Q99836 296 aa14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 METTL22Q9BUU2 404 aaPredicted RBP14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 FPGT-TNNI3KV9GXZ4 949 aa14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 ERBB3P21860 1342 aa14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 RBM6P78332 1123 aaKnown RBP14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 RAPGEF4Q8WZA2 1011 aa14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 TNMDQ9H2S6 317 aa14.12□□□□□ -0.15
SEC61A1-201ENST00000243253 HSP90AB3PQ58FF7 597 aa14.11□□□□□ -0.15
SEC61A1-201ENST00000243253 ZNF790Q6PG37 636 aa14.11□□□□□ -0.15
SEC61A1-201ENST00000243253 ANKRD24Q8TF21 1146 aa14.11□□□□□ -0.15
SEC61A1-201ENST00000243253 HAUS7Q99871 368 aa14.11□□□□□ -0.15
SEC61A1-201ENST00000243253 SH3TC1Q8TE82 1336 aa14.11□□□□□ -0.15
SEC61A1-201ENST00000243253 C11orf57Q6ZUT1 292 aaPredicted RBP14.11□□□□□ -0.15
SEC61A1-201ENST00000243253 DHX40Q8IX18 779 aaKnown RBP14.11□□□□□ -0.15
SEC61A1-201ENST00000243253 SYTL4Q96C24 671 aaPredicted RBP14.11□□□□□ -0.15
SEC61A1-201ENST00000243253 RCOR1Q9UKL0 485 aa14.11□□□□□ -0.15
SEC61A1-201ENST00000243253 PLEKHG2Q9H7P9 1386 aa14.11□□□□□ -0.15
SEC61A1-201ENST00000243253 PFKFB2O60825 505 aa14.11□□□□□ -0.15
SEC61A1-201ENST00000243253 NSUN7Q8NE18 718 aaKnown RBP14.11□□□□□ -0.15
SEC61A1-201ENST00000243253 A0A0G2JLW4 131 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 RNF20Q5VTR2 975 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 CCDC129Q6ZRS4 1044 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 FBXL16Q8N461 479 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 BRF1Q92994 677 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 HDAC5Q9UQL6 1122 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 FOXP2O15409 715 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 Q6ZUG5 572 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 NYAP1Q6ZVC0 841 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 NEK1Q96PY6 1258 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 TFCP2Q12800 502 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 PPP4R3BQ5MIZ7 849 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 UBE3BQ7Z3V4 1068 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 DNAJC25Q9H1X3 360 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 FAM53CQ9NYF3 392 aa14.1□□□□□ -0.15
SEC61A1-201ENST00000243253 GOLGA6L4A6NEF3 574 aa14.09□□□□□ -0.15
SEC61A1-201ENST00000243253 CHST3Q7LGC8 479 aa14.09□□□□□ -0.15
SEC61A1-201ENST00000243253 CHMP4CQ96CF2 233 aa14.09□□□□□ -0.15
SEC61A1-201ENST00000243253 SRCAPQ6ZRS2 3230 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms