RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 DNAI1Q9UI46 699 aa19.75■□□□□ 0.75
SLC1A4-201ENST00000234256 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.75■□□□□ 0.75
SLC1A4-201ENST00000234256 C6orf229H3BNL8 230 aa19.75■□□□□ 0.75
SLC1A4-201ENST00000234256 GSPT1P15170 499 aaKnown RBP19.75■□□□□ 0.75
SLC1A4-201ENST00000234256 PKP1Q13835 747 aa19.75■□□□□ 0.75
SLC1A4-201ENST00000234256 GOLGA6L10A6NI86 522 aa19.74■□□□□ 0.75
SLC1A4-201ENST00000234256 N4BP3O15049 544 aa19.74■□□□□ 0.75
SLC1A4-201ENST00000234256 RNMTO43148 476 aaKnown RBP19.74■□□□□ 0.75
SLC1A4-201ENST00000234256 CCDC96Q2M329 555 aa19.74■□□□□ 0.75
SLC1A4-201ENST00000234256 CRACR2BQ8N4Y2 399 aaPredicted RBP19.74■□□□□ 0.75
SLC1A4-201ENST00000234256 ZFYP08048 801 aaPredicted RBP19.74■□□□□ 0.75
SLC1A4-201ENST00000234256 TDRD12Q587J7 1177 aaKnown RBP19.74■□□□□ 0.75
SLC1A4-201ENST00000234256 PRIMPOLQ96LW4 560 aa19.74■□□□□ 0.75
SLC1A4-201ENST00000234256 TEX13AQ9BXU3 409 aaPredicted RBP19.74■□□□□ 0.75
SLC1A4-201ENST00000234256 SPTLC2O15270 562 aa19.74■□□□□ 0.75
SLC1A4-201ENST00000234256 KCNG4Q8TDN1 519 aa19.74■□□□□ 0.75
SLC1A4-201ENST00000234256 EDC3Q96F86 508 aaKnown RBP19.74■□□□□ 0.75
SLC1A4-201ENST00000234256 GADD45BO75293 160 aaPredicted RBP19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 DHX32Q7L7V1 743 aaKnown RBP19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 TAX1BP1Q86VP1 789 aa19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 C17orf53Q8N3J3 647 aaPredicted RBP19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 CDC5LQ99459 802 aaKnown RBP19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 SNX14Q9Y5W7 946 aa19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 MAGI2Q86UL8 1455 aa19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 SGSM2O43147 1006 aa19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 IGSF3O75054 1194 aa19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 NCOA5Q9HCD5 579 aaKnown RBP19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 SLC4A4Q9Y6R1 1079 aa19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 MTIF2P46199 727 aaKnown RBP19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 ZNF397Q8NF99 534 aaPredicted RBP19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 CCDC148Q8NFR7 591 aa19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 FAM89AQ96GI7 184 aa19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 MIGA1Q8NAN2 632 aa19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 IP6K1Q92551 441 aa19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 ORAI2Q96SN7 254 aa19.73■□□□□ 0.75
SLC1A4-201ENST00000234256 ZFYVE9O95405 1425 aa19.72■□□□□ 0.75
SLC1A4-201ENST00000234256 A0A1B0GVL5 298 aa19.72■□□□□ 0.75
SLC1A4-201ENST00000234256 ZNF287Q9HBT7 754 aa19.72■□□□□ 0.75
SLC1A4-201ENST00000234256 FKBP15Q5T1M5 1219 aa19.72■□□□□ 0.75
SLC1A4-201ENST00000234256 CCDC12Q8WUD4 166 aaPredicted RBP19.72■□□□□ 0.75
SLC1A4-201ENST00000234256 OTUD7BQ6GQQ9 843 aa19.72■□□□□ 0.75
SLC1A4-201ENST00000234256 MYO6Q9UM54 1294 aa19.71■□□□□ 0.75
SLC1A4-201ENST00000234256 NGLY1Q96IV0 654 aa19.71■□□□□ 0.75
SLC1A4-201ENST00000234256 RTN1Q16799 776 aa19.71■□□□□ 0.75
SLC1A4-201ENST00000234256 TAF4BQ92750 862 aa19.71■□□□□ 0.75
SLC1A4-201ENST00000234256 UQCRFS1P1P0C7P4 283 aa19.7■□□□□ 0.74
SLC1A4-201ENST00000234256 CGNQ9P2M7 1197 aaKnown RBP19.7■□□□□ 0.74
SLC1A4-201ENST00000234256 ZNF594Q96JF6 807 aaPredicted RBP19.7■□□□□ 0.74
SLC1A4-201ENST00000234256 STX17P56962 302 aa19.7■□□□□ 0.74
SLC1A4-201ENST00000234256 TCP11L1Q9NUJ3 509 aa19.7■□□□□ 0.74
SLC1A4-201ENST00000234256 TMEM63CQ9P1W3 806 aa19.7■□□□□ 0.74
SLC1A4-201ENST00000234256 ZNF790Q6PG37 636 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 LMBRD1Q9NUN5 540 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 PALD1Q9ULE6 856 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 RNF113AO15541 343 aaKnown RBP19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 YEATS4O95619 227 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 ZKSCAN3Q9BRR0 538 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 ZMYM3Q14202 1370 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 ADGBQ8N7X0 1667 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 KCNQ3O43525 872 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 GTF2F1P35269 517 aaKnown RBP eCLIP19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 ERLIN2O94905 339 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 NEFHP12036 1026 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 NBPF6Q5VWK0 638 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 NBPF4Q96M43 638 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 USP44Q9H0E7 712 aa19.69■□□□□ 0.74
SLC1A4-201ENST00000234256 MATR3P43243 847 aaKnown RBP eCLIP19.68■□□□□ 0.74
SLC1A4-201ENST00000234256 KAT14Q9H8E8 782 aa19.68■□□□□ 0.74
SLC1A4-201ENST00000234256 JAG2Q9Y219 1238 aa19.68■□□□□ 0.74
SLC1A4-201ENST00000234256 SPTY2D1Q68D10 685 aaPredicted RBP19.68■□□□□ 0.74
SLC1A4-201ENST00000234256 DHX58Q96C10 678 aa19.68■□□□□ 0.74
SLC1A4-201ENST00000234256 IFNKQ9P0W0 207 aa19.68■□□□□ 0.74
SLC1A4-201ENST00000234256 SUCLG2Q96I99 432 aa19.68■□□□□ 0.74
SLC1A4-201ENST00000234256 SLC27A2O14975 620 aa19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 PDE4BQ07343 736 aa19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 TRMT2AQ8IZ69 625 aaKnown RBP19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 ZMYND15Q9H091 742 aa19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 KIAA0754O94854 1291 aa19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 A1BGP04217 495 aa19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 LIG1P18858 919 aa19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 TCERG1LQ5VWI1 586 aa19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 ESR2Q92731 530 aa19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 KDM6BO15054 1643 aa19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 A0A1B0GUL7 405 aa19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 NIP7Q9Y221 180 aaKnown RBP eCLIP19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 RTL1A6NKG5 1358 aa19.67■□□□□ 0.74
SLC1A4-201ENST00000234256 KIF5BP33176 963 aa19.66■□□□□ 0.74
SLC1A4-201ENST00000234256 IQCEQ6IPM2 695 aa19.66■□□□□ 0.74
SLC1A4-201ENST00000234256 IFIT1BQ5T764 474 aaKnown RBP19.66■□□□□ 0.74
SLC1A4-201ENST00000234256 RRAGBQ5VZM2 374 aa19.66■□□□□ 0.74
SLC1A4-201ENST00000234256 TRIM47Q96LD4 638 aa19.66■□□□□ 0.74
SLC1A4-201ENST00000234256 PAXBP1Q9Y5B6 917 aa19.66■□□□□ 0.74
SLC1A4-201ENST00000234256 ARHGEF5Q12774 1597 aa19.66■□□□□ 0.74
SLC1A4-201ENST00000234256 CCDC150Q8NCX0 1101 aa19.66■□□□□ 0.74
SLC1A4-201ENST00000234256 GBP3Q9H0R5 595 aa19.66■□□□□ 0.74
SLC1A4-201ENST00000234256 CCDC152Q4G0S7 254 aa19.66■□□□□ 0.74
SLC1A4-201ENST00000234256 TXLNBQ8N3L3 684 aa19.66■□□□□ 0.74
SLC1A4-201ENST00000234256 IRS4O14654 1257 aaPredicted RBP19.65■□□□□ 0.74
SLC1A4-201ENST00000234256 GAS2L3Q86XJ1 694 aa19.65■□□□□ 0.74
SLC1A4-201ENST00000234256 IL17REQ8NFR9 667 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms