RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 BRD3Q15059 726 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 CCT2P78371 535 aaKnown RBP9.33□□□□□ -0.92
APOB-201ENST00000233242 BAG1Q99933 345 aaPredicted RBP9.33□□□□□ -0.92
APOB-201ENST00000233242 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 NLRP5P59047 1200 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 METTL24Q5JXM2 366 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 RUFY4Q6ZNE9 571 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 ATP6V1AP38606 617 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 SH2D4BQ5SQS7 431 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 ATF3P18847 181 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 ATP2B2Q01814 1243 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 MEX3CQ5U5Q3 659 aaKnown RBP9.33□□□□□ -0.92
APOB-201ENST00000233242 MIPOL1Q8TD10 442 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 STMN2Q93045 179 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 TTC41PQ6P2S7 1318 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 RAD50Q92878 1312 aa9.33□□□□□ -0.92
APOB-201ENST00000233242 USP37Q86T82 979 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 NAPGQ99747 312 aaPredicted RBP9.32□□□□□ -0.92
APOB-201ENST00000233242 AKR1B15C9JRZ8 316 aaPredicted RBP9.32□□□□□ -0.92
APOB-201ENST00000233242 ZNF569Q5MCW4 686 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 RBSNQ9H1K0 784 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 FAM184BQ9ULE4 1060 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 CCDC61Q9Y6R9 512 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 PHACTR2O75167 634 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 CIB2O75838 187 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.32□□□□□ -0.923e-73■□□□□ 9.7
APOB-201ENST00000233242 LRRC45Q96CN5 670 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 EHMT1Q9H9B1 1298 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 SAMD1Q6SPF0 538 aaPredicted RBP9.32□□□□□ -0.92
APOB-201ENST00000233242 CNNM2Q9H8M5 875 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 GUCY1B3Q02153 619 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 CLUL1Q15846 466 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 ERMNQ8TAM6 284 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 IFNKQ9P0W0 207 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 ZNF75DP51815 510 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 MXRA7P84157 204 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 HMGB2P26583 209 aaKnown RBP9.32□□□□□ -0.92
APOB-201ENST00000233242 DMTNQ08495 405 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 GRIN2BQ13224 1484 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 PPP1R2P41236 205 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 RAD54L2Q9Y4B4 1467 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 CCDC160A6NGH7 325 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 POLR3DP05423 398 aaPredicted RBP9.32□□□□□ -0.92
APOB-201ENST00000233242 LMOD1P29536 600 aaPredicted RBP9.32□□□□□ -0.92
APOB-201ENST00000233242 PPP1R9BQ96SB3 815 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 KRT23Q9C075 422 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 ASXL1Q8IXJ9 1541 aa9.32□□□□□ -0.92
APOB-201ENST00000233242 BUB1BO60566 1050 aaPredicted RBP9.31□□□□□ -0.92
APOB-201ENST00000233242 PPP4R3AQ6IN85 833 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 GPR161Q8N6U8 529 aaKnown RBP9.31□□□□□ -0.92
APOB-201ENST00000233242 NKIRAS1Q9NYS0 192 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 MYL5Q02045 173 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 TMEM67Q5HYA8 995 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 CCDC26Q8TAB7 109 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.31□□□□□ -0.922e-21■□□□□ 10.2
APOB-201ENST00000233242 ARHGAP6O43182 974 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 VCX3BQ9H321 246 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 CUL5Q93034 780 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 FEZ2Q9UHY8 353 aaPredicted RBP9.31□□□□□ -0.92
APOB-201ENST00000233242 RHOXF2BP0C7M4 288 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 IFT20Q8IY31 132 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 RHOXF2Q9BQY4 288 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 ELF2Q15723 593 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 MED4Q9NPJ6 270 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 HDAC9Q9UKV0 1011 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 PCK1P35558 622 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 ZSCAN26Q16670 478 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 CCDC38Q502W7 563 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 U2AF2P26368 475 aaKnown RBP eCLIP9.31□□□□□ -0.921e-13■■□□□ 14.4
APOB-201ENST00000233242 MFSD6Q6ZSS7 791 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 USP26Q9BXU7 913 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 WDHD1O75717 1129 aaPredicted RBP9.31□□□□□ -0.92
APOB-201ENST00000233242 GOLGA5Q8TBA6 731 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 FAM135AQ9P2D6 1515 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 ANKRD36BQ8N2N9 1353 aa9.31□□□□□ -0.92
APOB-201ENST00000233242 SLC5A1P13866 664 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 SLC8A1P32418 973 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 ARHGAP24Q8N264 748 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 ATP2A2P16615 1042 aaKnown RBP9.3□□□□□ -0.92
APOB-201ENST00000233242 IFIT5Q13325 482 aaKnown RBP9.3□□□□□ -0.92
APOB-201ENST00000233242 IQCDQ96DY2 449 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 RNF216Q9NWF9 866 aaPredicted RBP9.3□□□□□ -0.92
APOB-201ENST00000233242 PPP1R42Q7Z4L9 355 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 MYL6BP14649 208 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 STAT6P42226 847 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 BRF1Q92994 677 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 UBA5Q9GZZ9 404 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 PPFIA4O75335 1185 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 GOLGA6BA6NDN3 693 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 GRIPAP1Q4V328 841 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 AEBP2Q6ZN18 517 aaPredicted RBP9.3□□□□□ -0.92
APOB-201ENST00000233242 INTS8Q75QN2 995 aaKnown RBP9.3□□□□□ -0.92
APOB-201ENST00000233242 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 TRIM75PA6NK02 468 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 AOX1Q06278 1338 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 NUTM2GQ5VZR2 741 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 GUCA1BQ9UMX6 200 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 ATP8B1O43520 1251 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 THUMPD2Q9BTF0 503 aaKnown RBP9.3□□□□□ -0.92
APOB-201ENST00000233242 SELENOSQ9BQE4 189 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms