RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 MYL6BP14649 208 aa11.79□□□□□ -0.52
MDH1-201ENST00000233114 KCNJ4P48050 445 aa11.79□□□□□ -0.52
MDH1-201ENST00000233114 CABP4P57796 275 aa11.79□□□□□ -0.52
MDH1-201ENST00000233114 UVSSAQ2YD98 709 aa11.79□□□□□ -0.52
MDH1-201ENST00000233114 CCDC183Q5T5S1 534 aa11.79□□□□□ -0.52
MDH1-201ENST00000233114 USPL1Q5W0Q7 1092 aa11.79□□□□□ -0.52
MDH1-201ENST00000233114 USP48Q86UV5 1035 aa11.79□□□□□ -0.52
MDH1-201ENST00000233114 GPR108Q9NPR9 543 aa11.79□□□□□ -0.52
MDH1-201ENST00000233114 SPEF2Q9C093 1822 aa11.78□□□□□ -0.52
MDH1-201ENST00000233114 ERVV-2B6SEH9 535 aa11.78□□□□□ -0.52
MDH1-201ENST00000233114 HOXB3P14651 431 aaPredicted RBP11.78□□□□□ -0.52
MDH1-201ENST00000233114 CASP7P55210 303 aa11.78□□□□□ -0.52
MDH1-201ENST00000233114 PTPN12Q05209 780 aaKnown RBP11.78□□□□□ -0.52
MDH1-201ENST00000233114 TNNI3KQ59H18 835 aa11.78□□□□□ -0.52
MDH1-201ENST00000233114 CCDC8Q9H0W5 538 aaPredicted RBP11.78□□□□□ -0.52
MDH1-201ENST00000233114 USP16Q9Y5T5 823 aa11.78□□□□□ -0.52
MDH1-201ENST00000233114 FPGT-TNNI3KV9GXZ4 949 aa11.78□□□□□ -0.52
MDH1-201ENST00000233114 GJB2P29033 226 aa11.78□□□□□ -0.52
MDH1-201ENST00000233114 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
MDH1-201ENST00000233114 ADCK5Q3MIX3 580 aa11.78□□□□□ -0.52
MDH1-201ENST00000233114 EPHA10Q5JZY3 1008 aa11.78□□□□□ -0.52
MDH1-201ENST00000233114 BLOC1S2Q6QNY1 142 aa11.78□□□□□ -0.52
MDH1-201ENST00000233114 FAM227BQ96M60 508 aa11.78□□□□□ -0.52
MDH1-201ENST00000233114 BOLA2Q9H3K6 86 aa11.78□□□□□ -0.52
MDH1-201ENST00000233114 NSFL1CQ9UNZ2 370 aaKnown RBP11.78□□□□□ -0.52
MDH1-201ENST00000233114 WDR17Q8IZU2 1322 aa11.77□□□□□ -0.53
MDH1-201ENST00000233114 A0A0D9SFI3 127 aa11.77□□□□□ -0.53
MDH1-201ENST00000233114 RPS6KB1P23443 525 aa11.77□□□□□ -0.53
MDH1-201ENST00000233114 MSNP26038 577 aaKnown RBP11.77□□□□□ -0.53
MDH1-201ENST00000233114 CCDC83Q8IWF9 413 aa11.77□□□□□ -0.53
MDH1-201ENST00000233114 HAUS7Q99871 368 aa11.77□□□□□ -0.53
MDH1-201ENST00000233114 SIL1Q9H173 461 aa11.77□□□□□ -0.53
MDH1-201ENST00000233114 TLR7Q9NYK1 1049 aaKnown RBP11.77□□□□□ -0.53
MDH1-201ENST00000233114 CCDC39Q9UFE4 941 aa11.77□□□□□ -0.53
MDH1-201ENST00000233114 NOL7Q9UMY1 257 aaKnown RBP11.77□□□□□ -0.53
MDH1-201ENST00000233114 MTMR6Q9Y217 621 aa11.77□□□□□ -0.53
MDH1-201ENST00000233114 TCHHQ07283 1943 aa11.77□□□□□ -0.53
MDH1-201ENST00000233114 PALLDQ8WX93 1383 aa11.77□□□□□ -0.53
MDH1-201ENST00000233114 TJP1Q07157 1748 aa11.76□□□□□ -0.53
MDH1-201ENST00000233114 TNS2Q63HR2 1409 aa11.76□□□□□ -0.53
MDH1-201ENST00000233114 KCPQ6ZWJ8 1503 aa11.76□□□□□ -0.53
MDH1-201ENST00000233114 A0A087WZG4 1122 aa11.76□□□□□ -0.53
MDH1-201ENST00000233114 H7C1W4 665 aa11.76□□□□□ -0.53
MDH1-201ENST00000233114 LARGE1O95461 756 aa11.76□□□□□ -0.53
MDH1-201ENST00000233114 CDK11BP21127 795 aaKnown RBP11.76□□□□□ -0.53
MDH1-201ENST00000233114 ATG3Q9NT62 314 aa11.76□□□□□ -0.53
MDH1-201ENST00000233114 XIRP1Q702N8 1843 aaKnown RBP11.76□□□□□ -0.53
MDH1-201ENST00000233114 SH3TC1Q8TE82 1336 aa11.76□□□□□ -0.53
MDH1-201ENST00000233114 TAF5LO75529 589 aa11.75□□□□□ -0.53
MDH1-201ENST00000233114 ME3Q16798 604 aa11.75□□□□□ -0.53
MDH1-201ENST00000233114 UBE3BQ7Z3V4 1068 aa11.75□□□□□ -0.53
MDH1-201ENST00000233114 CHAMP1Q96JM3 812 aa11.75□□□□□ -0.53
MDH1-201ENST00000233114 DBNLQ9UJU6 430 aaKnown RBP11.75□□□□□ -0.53
MDH1-201ENST00000233114 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.75□□□□□ -0.53
MDH1-201ENST00000233114 ELP1O95163 1332 aa11.75□□□□□ -0.53
MDH1-201ENST00000233114 ZNF500O60304 480 aaPredicted RBP11.75□□□□□ -0.53
MDH1-201ENST00000233114 GADD45BO75293 160 aaPredicted RBP11.75□□□□□ -0.53
MDH1-201ENST00000233114 TERF1P54274 439 aa11.75□□□□□ -0.53
MDH1-201ENST00000233114 TFCP2Q12800 502 aa11.75□□□□□ -0.53
MDH1-201ENST00000233114 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.75□□□□□ -0.53
MDH1-201ENST00000233114 ZNF710Q8N1W2 664 aa11.75□□□□□ -0.53
MDH1-201ENST00000233114 CCDC191Q8NCU4 936 aa11.75□□□□□ -0.53
MDH1-201ENST00000233114 ZCRB1Q8TBF4 217 aaKnown RBP11.75□□□□□ -0.53
MDH1-201ENST00000233114 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
MDH1-201ENST00000233114 CWC25Q9NXE8 425 aaPredicted RBP11.75□□□□□ -0.53
MDH1-201ENST00000233114 CNPY2Q9Y2B0 182 aa11.75□□□□□ -0.53
MDH1-201ENST00000233114 COL5A2P05997 1499 aaPredicted RBP11.75□□□□□ -0.53
MDH1-201ENST00000233114 ABCA3Q99758 1704 aa11.74□□□□□ -0.53
MDH1-201ENST00000233114 CIAO1O76071 339 aa11.74□□□□□ -0.53
MDH1-201ENST00000233114 HMGB1P09429 215 aaKnown RBP11.74□□□□□ -0.53
MDH1-201ENST00000233114 CPA1P15085 419 aa11.74□□□□□ -0.53
MDH1-201ENST00000233114 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
MDH1-201ENST00000233114 ST3GAL1Q11201 340 aa11.74□□□□□ -0.53
MDH1-201ENST00000233114 CHRNA2Q15822 529 aa11.74□□□□□ -0.53
MDH1-201ENST00000233114 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.74□□□□□ -0.53
MDH1-201ENST00000233114 CHMP4CQ96CF2 233 aa11.74□□□□□ -0.53
MDH1-201ENST00000233114 TPCN1Q9ULQ1 816 aa11.74□□□□□ -0.53
MDH1-201ENST00000233114 SHANK3Q9BYB0 1731 aa11.73□□□□□ -0.53
MDH1-201ENST00000233114 FOXO4P98177 505 aa11.73□□□□□ -0.53
MDH1-201ENST00000233114 MCMDC2Q4G0Z9 681 aa11.73□□□□□ -0.53
MDH1-201ENST00000233114 KBTBD3Q8NAB2 608 aa11.73□□□□□ -0.53
MDH1-201ENST00000233114 CARD10Q9BWT7 1032 aa11.73□□□□□ -0.53
MDH1-201ENST00000233114 HELLSQ9NRZ9 838 aa11.73□□□□□ -0.53
MDH1-201ENST00000233114 ZKSCAN5Q9Y2L8 839 aa11.73□□□□□ -0.53
MDH1-201ENST00000233114 ZNF609O15014 1411 aa11.73□□□□□ -0.53
MDH1-201ENST00000233114 SOS2Q07890 1332 aaPredicted RBP11.73□□□□□ -0.53
MDH1-201ENST00000233114 OFD1O75665 1012 aa11.72□□□□□ -0.53
MDH1-201ENST00000233114 TPM2P07951 284 aa11.72□□□□□ -0.53
MDH1-201ENST00000233114 HOXB1P14653 301 aaPredicted RBP11.72□□□□□ -0.53
MDH1-201ENST00000233114 KRT85P78386 507 aa11.72□□□□□ -0.53
MDH1-201ENST00000233114 TOB2Q14106 344 aaPredicted RBP11.72□□□□□ -0.53
MDH1-201ENST00000233114 LMBR1LQ6UX01 489 aa11.72□□□□□ -0.53
MDH1-201ENST00000233114 BRINP3Q76B58 766 aa11.72□□□□□ -0.53
MDH1-201ENST00000233114 ZNF589Q86UQ0 364 aaPredicted RBP11.72□□□□□ -0.53
MDH1-201ENST00000233114 KLHDC4Q8TBB5 520 aa11.72□□□□□ -0.53
MDH1-201ENST00000233114 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
MDH1-201ENST00000233114 DDX17Q92841 729 aaKnown RBP11.72□□□□□ -0.53
MDH1-201ENST00000233114 NAP1L5Q96NT1 182 aaPredicted RBP11.72□□□□□ -0.53
MDH1-201ENST00000233114 GDPD2Q9HCC8 539 aa11.72□□□□□ -0.53
MDH1-201ENST00000233114 NBPF26B4DH59 902 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms