RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.77■□□□□ 0.12
HCFC2-201ENST00000229330 ABCC2Q92887 1545 aa15.77■□□□□ 0.12
HCFC2-201ENST00000229330 FBLN1P23142 703 aa15.77■□□□□ 0.12
HCFC2-201ENST00000229330 ZEB2O60315 1214 aa15.77■□□□□ 0.11
HCFC2-201ENST00000229330 VAMP4O75379 141 aa15.77■□□□□ 0.11
HCFC2-201ENST00000229330 BRD1O95696 1058 aa15.77■□□□□ 0.11
HCFC2-201ENST00000229330 HYPKQ9NX55 129 aa15.77■□□□□ 0.11
HCFC2-201ENST00000229330 CTDP1Q9Y5B0 961 aaPredicted RBP15.77■□□□□ 0.11
HCFC2-201ENST00000229330 SCLT1Q96NL6 688 aa15.77■□□□□ 0.11
HCFC2-201ENST00000229330 PYM1Q9BRP8 204 aaKnown RBP15.77■□□□□ 0.11
HCFC2-201ENST00000229330 AKAP2Q9Y2D5 859 aa15.77■□□□□ 0.11
HCFC2-201ENST00000229330 FAM114A1Q8IWE2 563 aa15.76■□□□□ 0.11
HCFC2-201ENST00000229330 LRRC2Q9BYS8 371 aa15.76■□□□□ 0.11
HCFC2-201ENST00000229330 RUFY3Q7L099 469 aa15.76■□□□□ 0.11
HCFC2-201ENST00000229330 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.76■□□□□ 0.11
HCFC2-201ENST00000229330 MPRIPQ6WCQ1 1025 aa15.76■□□□□ 0.11
HCFC2-201ENST00000229330 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
HCFC2-201ENST00000229330 IMPACTQ9P2X3 320 aa15.76■□□□□ 0.11
HCFC2-201ENST00000229330 PIK3R4Q99570 1358 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 DNMT1P26358 1616 aaKnown RBP15.75■□□□□ 0.11
HCFC2-201ENST00000229330 TMCO5BA8MYB1 307 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 AKR1B10O60218 316 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 CCDC96Q2M329 555 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 B4GALNT4Q76KP1 1039 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 A0A1B0GUA9 196 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 TRIM21P19474 475 aaKnown RBP15.75■□□□□ 0.11
HCFC2-201ENST00000229330 METAP2P50579 478 aaKnown RBP eCLIP15.75■□□□□ 0.11
HCFC2-201ENST00000229330 GPT2Q8TD30 523 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 TAOK3Q9H2K8 898 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 MKRN1Q9UHC7 482 aaKnown RBP15.75■□□□□ 0.11
HCFC2-201ENST00000229330 IFIT3O14879 490 aaKnown RBP15.75■□□□□ 0.11
HCFC2-201ENST00000229330 MARCKSP29966 332 aaPredicted RBP15.75■□□□□ 0.11
HCFC2-201ENST00000229330 RSRC1Q96IZ7 334 aaKnown RBP15.75■□□□□ 0.11
HCFC2-201ENST00000229330 GOLIM4O00461 696 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 NSRP1Q9H0G5 558 aaKnown RBP15.75■□□□□ 0.11
HCFC2-201ENST00000229330 NAPBQ9H115 298 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 INPP5BP32019 993 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 CHMP4BP1P59074 171 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 FAM160A1Q05DH4 1040 aa15.75■□□□□ 0.11
HCFC2-201ENST00000229330 RIMS2Q9UQ26 1411 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 PTCD1O75127 700 aaKnown RBP15.74■□□□□ 0.11
HCFC2-201ENST00000229330 TACC1O75410 805 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 KRT83P78385 493 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 ARFGAP2Q8N6H7 521 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 ANKS4BQ8N8V4 417 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 KRT86O43790 486 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 TUBB2AQ13885 445 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 CAPZA3Q96KX2 299 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 TUBB2BQ9BVA1 445 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 KRT28Q7Z3Y7 464 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 RAB11FIP4Q86YS3 637 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 NCOA7Q8NI08 942 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 PZPP20742 1482 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 KLF18A0A0U1RQI7 1052 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 MYL5Q02045 173 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 RRAGBQ5VZM2 374 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 CREB3L3Q68CJ9 461 aa15.74■□□□□ 0.11
HCFC2-201ENST00000229330 GSTTP1A0A1W2PQM5 241 aa15.73■□□□□ 0.11
HCFC2-201ENST00000229330 IKQ13123 557 aaPredicted RBP15.73■□□□□ 0.11
HCFC2-201ENST00000229330 ATL3Q6DD88 541 aa15.73■□□□□ 0.11
HCFC2-201ENST00000229330 MYD88Q99836 296 aa15.73■□□□□ 0.11
HCFC2-201ENST00000229330 GUCA1BQ9UMX6 200 aa15.73■□□□□ 0.11
HCFC2-201ENST00000229330 NAA25Q14CX7 972 aa15.73■□□□□ 0.11
HCFC2-201ENST00000229330 DBF4Q9UBU7 674 aaPredicted RBP15.73■□□□□ 0.11
HCFC2-201ENST00000229330 ANKRD24Q8TF21 1146 aa15.73■□□□□ 0.11
HCFC2-201ENST00000229330 RMND1Q9NWS8 449 aa15.73■□□□□ 0.11
HCFC2-201ENST00000229330 IBTKQ9P2D0 1353 aaPredicted RBP15.73■□□□□ 0.11
HCFC2-201ENST00000229330 WDHD1O75717 1129 aaPredicted RBP15.73■□□□□ 0.11
HCFC2-201ENST00000229330 MPHOSPH8Q99549 860 aa15.73■□□□□ 0.11
HCFC2-201ENST00000229330 ZNF215Q9UL58 517 aaPredicted RBP15.73■□□□□ 0.11
HCFC2-201ENST00000229330 CCDC129Q6ZRS4 1044 aa15.73■□□□□ 0.11
HCFC2-201ENST00000229330 MICU3Q86XE3 530 aa15.73■□□□□ 0.11
HCFC2-201ENST00000229330 TRIM47Q96LD4 638 aa15.73■□□□□ 0.11
HCFC2-201ENST00000229330 TSPYL6Q8N831 410 aa15.72■□□□□ 0.11
HCFC2-201ENST00000229330 HAND2P61296 217 aa15.72■□□□□ 0.11
HCFC2-201ENST00000229330 UBE4AQ14139 1066 aa15.72■□□□□ 0.11
HCFC2-201ENST00000229330 CCDC144CPQ8IYA2 1237 aa15.72■□□□□ 0.11
HCFC2-201ENST00000229330 ALG1Q9BT22 464 aa15.72■□□□□ 0.11
HCFC2-201ENST00000229330 EIF2AK4Q9P2K8 1649 aaKnown RBP15.72■□□□□ 0.11
HCFC2-201ENST00000229330 AFMP43652 599 aa15.72■□□□□ 0.11
HCFC2-201ENST00000229330 NOP2P46087 812 aaKnown RBP15.72■□□□□ 0.11
HCFC2-201ENST00000229330 NMIQ13287 307 aaPredicted RBP15.72■□□□□ 0.11
HCFC2-201ENST00000229330 OTUD7AQ8TE49 926 aaPredicted RBP15.72■□□□□ 0.11
HCFC2-201ENST00000229330 SLC26A6Q9BXS9 759 aa15.72■□□□□ 0.11
HCFC2-201ENST00000229330 TTC41PQ6P2S7 1318 aa15.72■□□□□ 0.11
HCFC2-201ENST00000229330 LRP2BPQ9P2M1 347 aa15.72■□□□□ 0.11
HCFC2-201ENST00000229330 PPP1R12BO60237 982 aaPredicted RBP15.71■□□□□ 0.11
HCFC2-201ENST00000229330 MYO1BO43795 1136 aa15.71■□□□□ 0.11
HCFC2-201ENST00000229330 STARD3NLO95772 234 aa15.71■□□□□ 0.11
HCFC2-201ENST00000229330 KIF5AQ12840 1032 aa15.71■□□□□ 0.11
HCFC2-201ENST00000229330 MYCBPQ99417 103 aaPredicted RBP15.71■□□□□ 0.11
HCFC2-201ENST00000229330 CCDC155Q8N6L0 562 aa15.71■□□□□ 0.11
HCFC2-201ENST00000229330 NEK11Q8NG66 645 aa15.71■□□□□ 0.11
HCFC2-201ENST00000229330 ARHGEF12Q9NZN5 1544 aa15.71■□□□□ 0.11
HCFC2-201ENST00000229330 AKR1B15C9JRZ8 316 aaPredicted RBP15.71■□□□□ 0.11
HCFC2-201ENST00000229330 MAP2K2P36507 400 aa15.71■□□□□ 0.11
HCFC2-201ENST00000229330 VAV2P52735 878 aa15.71■□□□□ 0.11
HCFC2-201ENST00000229330 TMEM67Q5HYA8 995 aa15.71■□□□□ 0.11
HCFC2-201ENST00000229330 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
HCFC2-201ENST00000229330 PPIP5K1Q6PFW1 1433 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms