RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Gm10563F6WIE4 79 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Cwc25Q9DBF7 416 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 FibpQ9JI19 357 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Speer4dL7N216 212 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Q3UJC8 639 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Nlrp2Q4PLS0 1046 aaKnown RBP17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Lrrc2Q8VDB8 371 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 SncbQ91ZZ3 133 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Rbm8a2A0A0N4SUH6 174 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Csrnp2Q8BGQ2 534 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Rbm8aQ9CWZ3 174 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ccdc105Q9D4K7 499 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 S100bP50114 92 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Tpx2A2APB8 745 aaKnown RBP17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ice2Q3UZ18 988 aaKnown RBP17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Clul1Q3ZRW6 464 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Depdc1bQ8BH88 529 aa17.1■□□□□ 0.33
Chd3-201ENSMUST00000092971 Rbbp8nlA2ABX0 614 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ccdc129Q14B48 1034 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Exoc3Q6KAR6 755 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Tmem87bQ8BKU8 555 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Tmod2Q9JKK7 351 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Agbl1Q09M05 972 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Smarcc2Q6PDG5 1213 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Map3k11Q80XI6 850 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ppp1r15aP17564 657 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 FanclQ9CR14 375 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ncapd3Q6ZQK0 1506 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Cct6bQ61390 531 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Taco1Q8K0Z7 294 aaKnown RBP17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ppfia1B2RXQ2 1266 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 ZgpatQ8VDM1 511 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Cabp5Q9JLK3 173 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ttc21aQ8C0S4 1314 aa17.09■□□□□ 0.33
Chd3-201ENSMUST00000092971 IkbkgO88522 412 aa17.08■□□□□ 0.33
Chd3-201ENSMUST00000092971 Abtb2Q7TQI7 1024 aa17.08■□□□□ 0.33
Chd3-201ENSMUST00000092971 Cdr1E9Q0B4 517 aa17.08■□□□□ 0.33
Chd3-201ENSMUST00000092971 Gimap8Q75N62 688 aa17.08■□□□□ 0.33
Chd3-201ENSMUST00000092971 Morc4Q8BMD7 928 aa17.08■□□□□ 0.33
Chd3-201ENSMUST00000092971 Cplx3Q8R1B5 158 aa17.08■□□□□ 0.33
Chd3-201ENSMUST00000092971 Cnpy2Q9QXT0 182 aa17.08■□□□□ 0.33
Chd3-201ENSMUST00000092971 MarcksP26645 309 aaKnown RBP17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 Zbtb16Q3UQ17 673 aa17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 Abcc4E9Q236 1325 aa17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 Sall3Q62255 1320 aa17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 AU022751B1B0V2 589 aa17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 Leo1Q5XJE5 667 aa17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 Fmnl3Q6ZPF4 1028 aa17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 Tyro3P55144 880 aa17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 Igsf3Q6ZQA6 1194 aa17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 Pdcl2Q78Y63 240 aa17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 Luc7l2Q7TNC4 392 aaKnown RBP17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 Tbc1d8Q9Z1A9 1134 aa17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 Sos1Q62245 1319 aa17.08■□□□□ 0.32
Chd3-201ENSMUST00000092971 Sp4Q62445 782 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Clip2Q9Z0H8 1047 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Stmn2P55821 179 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Stmn4P63042 189 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 MycbpapQ5SUV2 932 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Hook2Q7TMK6 716 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Riok3Q9DBU3 519 aaKnown RBP17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Diaph1O08808 1255 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Tspyl1O88852 379 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Casp1P29452 402 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Pa2g4P50580 394 aaKnown RBP17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Mcm7Q61881 719 aaKnown RBP17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Kcnh5Q920E3 988 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 IqcdQ9D3V1 458 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Tnnc1P19123 161 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Gadd45bP22339 160 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Tab2Q99K90 693 aa17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 AticQ9CWJ9 592 aaKnown RBP17.07■□□□□ 0.32
Chd3-201ENSMUST00000092971 Nub1P54729 614 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Spata16Q8C636 571 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Eps15P42567 897 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Nkx1-2P42580 305 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Ttll12Q3UDE2 639 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Pls1Q3V0K9 630 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Acnat2Q8BGG9 420 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Tbc1d5Q80XQ2 815 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Rassf2Q8BMS9 326 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 ScribQ80U72 1612 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Cfap100Q80VN0 613 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Rab44Q8CB87 725 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Trim68Q8K243 485 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Ccdc94Q9D6J3 314 aa17.06■□□□□ 0.32
Chd3-201ENSMUST00000092971 Krt19P19001 403 aa17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 Egfem1Q8C088 590 aa17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 Ccdc186Q8C9S4 917 aa17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 Ube3aO08759 870 aa17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 Opa1P58281 960 aa17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 ErmnQ5EBJ4 281 aa17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 Cd274Q9EP73 290 aa17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 Plekho1Q9JIY0 408 aa17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 Atp2a2O55143 1044 aaKnown RBP17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 Sptlc2P97363 560 aaKnown RBP17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 Lmbr1lQ9D1E5 489 aa17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 Lonrf3Q9D4H7 753 aa17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 Zbtb45Q52KG4 520 aa17.05■□□□□ 0.32
Chd3-201ENSMUST00000092971 Zc3h12cQ5DTV4 884 aa17.05■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms