RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 LIMS1P48059 325 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 PDLIM4P50479 330 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 PPP2R2BQ00005 443 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 TBC1D28Q2M2D7 210 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 FGD3Q5JSP0 725 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 FAM27BQ5VT28 67 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 PODNL1Q6PEZ8 512 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 TBPL2Q6SJ96 375 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 FOXL2NBQ6ZUU3 175 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 ARHGAP24Q8N264 748 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 SVOPLQ8N434 492 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 FAM86B1Q8N7N1 296 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 ARIH2OSQ8N7S6 290 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 HTRA1Q92743 480 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 NABP1Q96AH0 204 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 MCUR1Q96AQ8 359 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 CCT8L2Q96SF2 557 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 GPX7Q96SL4 187 aaPredicted RBP15.27■□□□□ 0.04
PTPN11-207ENST00000639857 CDRT15Q96T59 188 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 VRK1Q99986 396 aaPredicted RBP15.27■□□□□ 0.04
PTPN11-207ENST00000639857 LRMDAQ9H2I8 198 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 RNF121Q9H920 327 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 GRHPRQ9UBQ7 328 aa15.27■□□□□ 0.04
PTPN11-207ENST00000639857 IQCMA0A1B0GVH7 501 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 LOC390937A0A1W2PQ73 354 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 TMEM129A0AVI4 362 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 ARPC2O15144 300 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 TLX2O43763 284 aaPredicted RBP15.26■□□□□ 0.03
PTPN11-207ENST00000639857 PATE4P0C8F1 98 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 PCSK6P29122 969 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 RPL4P36578 427 aaKnown RBP15.26■□□□□ 0.03
PTPN11-207ENST00000639857 GUCA1AP43080 201 aaPredicted RBP15.26■□□□□ 0.03
PTPN11-207ENST00000639857 OMPP47874 163 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 MXRA7P84157 204 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 FMODQ06828 376 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 IQCCQ4KMZ1 466 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 DEFB107AQ8IZN7 70 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 FUZQ9BT04 418 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 WACQ9BTA9 647 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 DYNLRB1Q9NP97 96 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 CCNB1IP1Q9NPC3 277 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 SIGLEC7Q9Y286 467 aa15.26■□□□□ 0.03
PTPN11-207ENST00000639857 M0R233 179 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 XKRYO14609 159 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 SYNGR3O43761 229 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 CD5LO43866 347 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 GPRIN2O60269 458 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 NDUFB2O95178 105 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 MTX3Q5HYI7 312 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 GPR139Q6DWJ6 353 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 FAM122BQ7Z309 247 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 IGFN1Q86VF2 1251 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 MEX3DQ86XN8 651 aaKnown RBP15.25■□□□□ 0.03
PTPN11-207ENST00000639857 FITM2Q8N6M3 262 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 ZNF540Q8NDQ6 660 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 FAM46AQ96IP4 442 aaKnown RBP15.25■□□□□ 0.03
PTPN11-207ENST00000639857 PIMREGQ9BSJ6 248 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 MUC13Q9H3R2 512 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 MS4A5Q9H3V2 200 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 CDH20Q9HBT6 801 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 AURKCQ9UQB9 309 aa15.25■□□□□ 0.03
PTPN11-207ENST00000639857 IGKV1D-43A0A0B4J1Z2 117 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 TRBV4-1A0A0J9YWV2 114 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 SH3PXD2BA1X283 911 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 VWC2LB2RUY7 222 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 PTP4A3O75365 173 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 GADD45GO95257 159 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 FABP3P05413 133 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 CST2P09228 141 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 SDHAP31040 664 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 CDAP32320 146 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 PCBD1P61457 104 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 ERVK-25P63136 954 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 HSF2Q03933 536 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 SYT9Q86SS6 491 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 ADCK1Q86TW2 530 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 C1orf174Q8IYL3 243 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 LRRC18Q8N456 261 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 CCDC197Q8NCU1 140 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 MAPK1IP1LQ8NDC0 245 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 NSMAFQ92636 917 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 POP5Q969H6 163 aaKnown RBP15.24■□□□□ 0.03
PTPN11-207ENST00000639857 RSRC1Q96IZ7 334 aaKnown RBP15.24■□□□□ 0.03
PTPN11-207ENST00000639857 ZNF570Q96NI8 536 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 MRPL37Q9BZE1 423 aaKnown RBP15.24■□□□□ 0.03
PTPN11-207ENST00000639857 BCL2L14Q9BZR8 327 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 IL1RAPQ9NPH3 570 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 NRIP3Q9NQ35 241 aa15.24■□□□□ 0.03
PTPN11-207ENST00000639857 RTTNQ86VV8 2226 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 PRSS37A4D1T9 235 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 LY6HO94772 140 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 APEHP13798 732 aaKnown RBP15.23■□□□□ 0.03
PTPN11-207ENST00000639857 ZNF26P17031 533 aaPredicted RBP15.23■□□□□ 0.03
PTPN11-207ENST00000639857 ZNF32P17041 273 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 MSR1P21757 451 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 USF1P22415 310 aaPredicted RBP15.23■□□□□ 0.03
PTPN11-207ENST00000639857 CALB2P22676 271 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 APLNRP35414 380 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 RAD52P43351 418 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 SPIBQ01892 262 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms