RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CLUP10909 449 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 SLC2A5P22732 501 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 IGHV1-2P23083 117 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 ZNF84P51523 738 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 FOXG1P55316 489 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 SH3BGRP55822 239 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 IL5RAQ01344 420 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 TFF3Q07654 80 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 MAD2L1BPQ15013 274 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 ETFDHQ16134 617 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 OCLNQ16625 522 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 FBXL19-AS1Q494R0 122 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 MEDAGQ5VYS4 303 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 FOXL2NBQ6ZUU3 175 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 ZNF627Q7L945 461 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 NSMAFQ92636 917 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 OTULINQ96BN8 352 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 RBM24Q9BX46 236 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 RASSF1Q9NS23 344 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 MOKQ9UQ07 419 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 CENPEQ02224 2701 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 ZNF99A8MXY4 864 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 GYPBP06028 91 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 MYF6P23409 242 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 ASCL1P50553 236 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 DBPQ10586 325 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 SLC35D3Q5M8T2 416 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 BCDIN3DQ7Z5W3 292 aaKnown RBP17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 THAP5Q7Z6K1 395 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 GID4Q8IVV7 300 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 PROKR2Q8NFJ6 384 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 BBS1Q8NFJ9 593 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 FBLIM1Q8WUP2 373 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 OR51V1Q9H2C8 321 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 Q9H521 79 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 RERGLQ9H628 205 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 ELOVL5Q9NYP7 299 aa17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 COA3Q9Y2R0 106 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-221ENST00000622702 CELSR2Q9HCU4 2923 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 NBPF19A0A087WUL8 3843 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 PYCR1P32322 319 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 CENPAP49450 140 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 TEKQ02763 1124 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 TGFBR3Q03167 851 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 GLO1Q04760 184 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 NRN1LQ496H8 165 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 LINC01590Q5TEZ4 76 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 GLB1L2Q8IW92 636 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 ZNF433Q8N7K0 673 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 APH1BQ8WW43 257 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 ZNRF4Q8WWF5 429 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 ZNF582Q96NG8 517 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 FOXB1Q99853 325 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 NPDC1Q9NQX5 325 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 TMEM38BQ9NVV0 291 aa17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 H2AFY2Q9P0M6 372 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-221ENST00000622702 DENRO43583 198 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 WBP4O75554 376 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 GLCEO94923 617 aa17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 PSMB1P20618 241 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 LAP3P28838 519 aa17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 BLVRAP53004 296 aa17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 MRPS34P82930 218 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 ARF1P84077 181 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 KLHL12Q53G59 568 aa17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 MEPCEQ7L2J0 689 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 C1orf162Q8NEQ5 155 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 OR51L1Q8NGJ5 315 aa17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 RFKQ969G6 155 aa17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 BOD1Q96IK1 185 aa17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 Q96MT0 163 aa17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 CLN6Q9NWW5 311 aa17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 DNAJC27Q9NZQ0 273 aa17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 AASSQ9UDR5 926 aa17.41■□□□□ 0.38
PDLIM2-221ENST00000622702 CCDC182A6NF36 153 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 SLC22A31A6NKX4 558 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 ENTPD6O75354 484 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 GAAP10253 952 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 NPR2P20594 1047 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 CD79BP40259 229 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 HSF2Q03933 536 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 APOFQ13790 326 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 SFRP5Q5T4F7 317 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 C9orf135Q5VTT2 229 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 STAC2Q6ZMT1 411 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 CXorf67Q86X51 503 aaPredicted RBP17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 SLC26A10Q8NG04 563 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 LRRC46Q96FV0 321 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 TEAD3Q99594 435 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 HDHD5Q9BXW7 423 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 GALNT8Q9NY28 637 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 LRRC42Q9Y546 428 aa17.4■□□□□ 0.38
PDLIM2-221ENST00000622702 A0A1W2PPL8 197 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 SNTNA6NMZ2 147 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 FAM171A2A8MVW0 826 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 LYZL6O75951 148 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 HRGP04196 525 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 HTR1FP30939 366 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 CDAP32320 146 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 GUCA1AP43080 201 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms