RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 HLA-DQB1P01920 261 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 IAH1Q2TAA2 248 aaPredicted RBP13.38□□□□□ -0.27
VPS36-207ENST00000611132 C11orf87Q6NUJ2 197 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 TMEM71Q6P5X7 295 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 GALNT16Q8N428 558 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 OR2G2Q8NGZ5 317 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 HHIPL1Q96JK4 782 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 ZNF442Q9H7R0 627 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 TAF9BQ9HBM6 251 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 ZNF304Q9HCX3 659 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 PCDHB10Q9UN67 800 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 ANKRD20A5PA0PJZ0 165 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 CTNSO60931 367 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 HNRNPA2B1P22626 353 aaKnown RBP13.38□□□□□ -0.27
VPS36-207ENST00000611132 NPY4RP50391 375 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 SNRPNP63162 240 aaKnown RBP13.38□□□□□ -0.27
VPS36-207ENST00000611132 MPPED2Q15777 294 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 KCNG3Q8TAE7 436 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 LMX1AQ8TE12 382 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 PPP4R1LQ9P1A2 415 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 OR5V1Q9UGF6 321 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 ACAD8Q9UKU7 415 aa13.38□□□□□ -0.27
VPS36-207ENST00000611132 OR7A5Q15622 319 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 CDKN3Q16667 212 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 ASTLQ6HA08 431 aaPredicted RBP13.37□□□□□ -0.27
VPS36-207ENST00000611132 WDR88Q6ZMY6 472 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 OR2W3Q7Z3T1 314 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 SLC6A18Q96N87 628 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 EXOSC3Q9NQT5 275 aaKnown RBP13.37□□□□□ -0.27
VPS36-207ENST00000611132 TAS2R4Q9NYW5 299 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 NTMQ9P121 344 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 LRFN1Q9P244 771 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 SLC7A11Q9UPY5 501 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 P2RY10O00398 339 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 SIGLEC6O43699 453 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 FGF17O60258 216 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 CCL5P13501 91 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 APEHP13798 732 aaKnown RBP13.37□□□□□ -0.27
VPS36-207ENST00000611132 SDHAP31040 664 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 RPS27P42677 84 aaKnown RBP13.37□□□□□ -0.27
VPS36-207ENST00000611132 THSD4Q6ZMP0 1018 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 GKN2Q86XP6 184 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 UEVLDQ8IX04 471 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 ZNF595Q8IYB9 648 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 OR52H1Q8NGJ2 320 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 PRDM7Q9NQW5 492 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 ATG12O94817 140 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 ZFPL1O95159 310 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 SLC34A2O95436 690 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 KLF9Q13886 244 aaPredicted RBP13.37□□□□□ -0.27
VPS36-207ENST00000611132 EOGTQ5NDL2 527 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 DDIT4LQ96D03 193 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 OR10A5Q9H207 317 aa13.37□□□□□ -0.27
VPS36-207ENST00000611132 FJX1Q86VR8 437 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 FAM160A2Q8N612 972 aaPredicted RBP13.36□□□□□ -0.27
VPS36-207ENST00000611132 FGGYQ96C11 551 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 ZDHHC12Q96GR4 267 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 PRRG4Q9BZD6 226 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 UBE2KP61086 200 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 RIN1Q13671 783 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 GPR157Q5UAW9 335 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 CD200R1LQ6Q8B3 271 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 C19orf48Q6RUI8 117 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 LYG2Q86SG7 212 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 MRPL43Q8N983 215 aaKnown RBP13.36□□□□□ -0.27
VPS36-207ENST00000611132 OR5M9Q8NGP3 310 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 OR1J2Q8NGS2 313 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 MBNL1Q9NR56 388 aaKnown RBP13.36□□□□□ -0.27
VPS36-207ENST00000611132 OR52A1Q9UKL2 312 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 PCYT1BQ9Y5K3 369 aaPredicted RBP13.36□□□□□ -0.27
VPS36-207ENST00000611132 TRIP12Q14669 1992 aaPredicted RBP13.36□□□□□ -0.27
VPS36-207ENST00000611132 H3BML4 177 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 FBLP22087 321 aaKnown RBP13.36□□□□□ -0.27
VPS36-207ENST00000611132 MED25Q71SY5 747 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 NAA40Q86UY6 237 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 NICN1Q9BSH3 213 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 MRPS28Q9Y2Q9 187 aaKnown RBP13.36□□□□□ -0.27
VPS36-207ENST00000611132 NRXN2Q9P2S2 1712 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 TRAV36DV7A0A075B6V5 113 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 IDH3GP51553 393 aaPredicted RBP13.36□□□□□ -0.27
VPS36-207ENST00000611132 POU3F1Q03052 451 aaPredicted RBP13.36□□□□□ -0.27
VPS36-207ENST00000611132 SLC39A5Q6ZMH5 540 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 OR2L13Q8N349 312 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 NXPE3Q969Y0 559 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 OPN4Q9UHM6 478 aa13.36□□□□□ -0.27
VPS36-207ENST00000611132 COL11A2P13942 1736 aaPredicted RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 A0A087WV62 115 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 CHRM2P08172 466 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 ZNF93P35789 620 aaPredicted RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 EGR3Q06889 387 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 RTL6Q6ICC9 239 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 MEX3BQ6ZN04 569 aaKnown RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 FAM213BQ8TBF2 198 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 KIR3DX1Q9H7L2 352 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 NUDT21O43809 227 aaKnown RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 RPA2P15927 270 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 RAB13P51153 203 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 ZNF84P51523 738 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 EPHA4P54764 986 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 MFGE8Q08431 387 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms