RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CENPBD1B2RD01 187 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 ORC5O43913 435 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 RAD1O60671 282 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 ANXA2P07355 339 aaKnown RBP12.21□□□□□ -0.45
NEK3-205ENST00000610828 UMODP07911 640 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 TRAPPC2P0DI81 140 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 TRAPPC2BP0DI82 140 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 DPP4P27487 766 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 SLC6A1P30531 599 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 AGFG1P52594 562 aaKnown RBP12.21□□□□□ -0.45
NEK3-205ENST00000610828 RAB25P57735 213 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 SLC36A2Q495M3 483 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 MTFR2Q6P444 385 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 MDGA2Q7Z553 956 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 TMPRSS12Q86WS5 348 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 POC1BQ8TC44 478 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 RNF128Q8TEB7 428 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 EMC6Q9BV81 110 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 BEX2Q9BXY8 128 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 POTEKPQ9BYX7 375 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 SERINC1Q9NRX5 453 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 ALKBH4Q9NXW9 302 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 SLC22A13Q9Y226 551 aa12.21□□□□□ -0.45
NEK3-205ENST00000610828 LOC102723996A0A087X1L8 192 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 IGLV3-32A0A0A0MS00 114 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 KLF7O75840 302 aaPredicted RBP12.21□□□□□ -0.46
NEK3-205ENST00000610828 WNT11O96014 354 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 PNPP00491 289 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 ZNF823P16415 610 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 MAP2K6P52564 334 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 RIDAP52758 137 aaKnown RBP12.21□□□□□ -0.46
NEK3-205ENST00000610828 FOXK1P85037 733 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 ZFP69Q49AA0 526 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 SLC25A53Q5H9E4 307 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 C3orf33Q6P1S2 294 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 DNM1P34Q6PK57 102 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 BAIAP2L2Q6UXY1 529 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 SERPINA12Q8IW75 414 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 OR2M3Q8NG83 312 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 PPP1R14AQ96A00 147 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 CMTM3Q96MX0 182 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 KCNK17Q96T54 332 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 B3GALT5Q9Y2C3 310 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 N6AMT1Q9Y5N5 214 aa12.21□□□□□ -0.46
NEK3-205ENST00000610828 INMT-MINDY4F8WBC2 141 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 GPR171O14626 319 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 RAF1P04049 648 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 MC2RQ01718 297 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 ROM1Q03395 351 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 TEX30Q5JUR7 227 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 HACD4Q5VWC8 232 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 LINGO2Q7L985 606 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 LRRTM1Q86UE6 522 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 OR4K17Q8NGC6 315 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 CREB3L1Q96BA8 519 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 SLC25A38Q96DW6 304 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 CMKLR1Q99788 373 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 AUNIPQ9H7T9 357 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 RANGRFQ9HD47 186 aaPredicted RBP12.2□□□□□ -0.46
NEK3-205ENST00000610828 LRP12Q9Y561 859 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 CHCHD2Q9Y6H1 151 aaPredicted RBP12.2□□□□□ -0.46
NEK3-205ENST00000610828 TRBV5-7A0A0A0MS05 114 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 IGKV1D-43A0A0B4J1Z2 117 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 A0A1W2PNR3 127 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 CENPXA8MT69 81 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 FAM47E-STBD1D6RA91 191 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 TP53I11O14683 189 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 DKK1O94907 266 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 COX6A1P12074 109 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 HLA-DMAP28067 261 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 BTCP35070 178 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 CCR9P51686 369 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 BIDP55957 195 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 CD83Q01151 205 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 MFGE8Q08431 387 aaPredicted RBP12.2□□□□□ -0.46
NEK3-205ENST00000610828 STPG1Q5TH74 334 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 FDX2Q6P4F2 183 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 WDSUB1Q8N9V3 476 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 SLC26A10Q8NG04 563 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 OR52N5Q8NH56 324 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 SYNPRQ8TBG9 265 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 FYTTD1Q96QD9 318 aaKnown RBP12.2□□□□□ -0.46
NEK3-205ENST00000610828 PTGES2Q9H7Z7 377 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 MOV10Q9HCE1 1003 aaKnown RBP12.2□□□□□ -0.46
NEK3-205ENST00000610828 SLC39A1Q9NY26 324 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 OR5V1Q9UGF6 321 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 RPH3AQ9Y2J0 694 aaPredicted RBP12.2□□□□□ -0.46
NEK3-205ENST00000610828 B3GALT1Q9Y5Z6 326 aa12.2□□□□□ -0.46
NEK3-205ENST00000610828 KIF26BQ2KJY2 2108 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 NPIPB13A6NJU9 1138 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 NPIPB4C9JG80 1138 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 H0YC42 278 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 ARSBP15848 533 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 PLA1AQ53H76 456 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 TCEAL6Q6IPX3 200 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 DCXRQ7Z4W1 244 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 GPAT4Q86UL3 456 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 LINC00346Q8IVM7 164 aa12.19□□□□□ -0.46
NEK3-205ENST00000610828 SIAH3Q8IW03 269 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 265.6 ms