RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 ZDHHC11Q9H8X9 412 aa4.06□□□□□ -1.76
LINC00458-206ENST00000607494 QPCTLQ9NXS2 382 aa4.06□□□□□ -1.76
LINC00458-206ENST00000607494 CCDC59Q9P031 241 aaKnown RBP4.06□□□□□ -1.76
LINC00458-206ENST00000607494 LGALS13Q9UHV8 139 aa4.06□□□□□ -1.76
LINC00458-206ENST00000607494 ING4Q9UNL4 249 aa4.06□□□□□ -1.76
LINC00458-206ENST00000607494 BZW2Q9Y6E2 419 aaKnown RBP4.06□□□□□ -1.76
LINC00458-206ENST00000607494 C3P01024 1663 aa4.06□□□□□ -1.76
LINC00458-206ENST00000607494 MED1Q15648 1581 aaPredicted RBP4.06□□□□□ -1.76
LINC00458-206ENST00000607494 NCOA1Q15788 1441 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 PIK3R4Q99570 1358 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 LINC00854A0A1B0GVQ3 168 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 TMEM120BA0PK00 339 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 SIVA1O15304 175 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 NVLO15381 856 aaKnown RBP4.05□□□□□ -1.76
LINC00458-206ENST00000607494 ZNF780AO75290 641 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-206ENST00000607494 IFNW1P05000 195 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 MGMTP16455 207 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 TNFSF9P41273 254 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 VDAC2P45880 294 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-206ENST00000607494 GPR6P46095 362 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-206ENST00000607494 OR3A4PP47883 348 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 MEOX2P50222 304 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 P2RY4P51582 365 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 ACTA2P62736 377 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 ACTG2P63267 376 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 ACTC1P68032 377 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 ACTA1P68133 377 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 ACVR1Q04771 509 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 ECH1Q13011 328 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 STK38Q15208 465 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 ATAD3CQ5T2N8 411 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 GPR157Q5UAW9 335 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 MARC1Q5VT66 337 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 MLIPQ5VWP3 458 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 PAMR1Q6UXH9 720 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 SCARA5Q6ZMJ2 495 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 MRPL21Q7Z2W9 205 aaKnown RBP4.05□□□□□ -1.76
LINC00458-206ENST00000607494 LINC00612Q8N6U2 182 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 PRELID2Q8N945 189 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 LRRC75AQ8NAA5 344 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 HSD17B11Q8NBQ5 300 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 OR10H4Q8NGA5 316 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 OR2AP1Q8NGE2 309 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 FRAT1Q92837 279 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-206ENST00000607494 NAT6Q93015 286 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 MED8Q96G25 268 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 DUS3LQ96G46 650 aaKnown RBP4.05□□□□□ -1.76
LINC00458-206ENST00000607494 C9orf72Q96LT7 481 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 CSPG4P5Q96PW8 444 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 TSG101Q99816 390 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 ARHGDIGQ99819 225 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 EBF4Q9BQW3 602 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 HES7Q9BYE0 225 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 SLC7A5P2Q9GIP4 190 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 SIAEQ9HAT2 523 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 RETNQ9HD89 108 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 DYRK4Q9NR20 520 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 PRR34Q9NV39 138 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 ASF1AQ9Y294 204 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 ZNF256Q9Y2P7 627 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-206ENST00000607494 SAR1BQ9Y6B6 198 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 CDH10Q9Y6N8 788 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 DIP2CQ9Y2E4 1556 aa4.05□□□□□ -1.76
LINC00458-206ENST00000607494 CDK13Q14004 1512 aaKnown RBP4.05□□□□□ -1.76
LINC00458-206ENST00000607494 MSH6P52701 1360 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 KIR2DL5BA0A0G2JN68 375 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 KIR2DL5BA0A0G2JPC4 375 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 GLYATL1P3A0A0U1RQE8 302 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 ZNF99A8MXY4 864 aaPredicted RBP4.04□□□□□ -1.76
LINC00458-206ENST00000607494 ZBTB5O15062 677 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 RNF113AO15541 343 aaKnown RBP4.04□□□□□ -1.76
LINC00458-206ENST00000607494 CLDN11O75508 207 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 SCELO95171 688 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 CD160O95971 181 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 ACSM4P0C7M7 580 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 CTRB1P17538 263 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 SUB1P53999 127 aaKnown RBP eCLIP4.04□□□□□ -1.76
LINC00458-206ENST00000607494 ZNF92Q03936 586 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 TRAM2Q15035 370 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 CTRB2Q6GPI1 263 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 ZNF620Q6ZNG0 422 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 KIR2DL5AQ8N109 375 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 INO80EQ8NBZ0 244 aaPredicted RBP4.04□□□□□ -1.76
LINC00458-206ENST00000607494 VN1R2Q8NFZ6 395 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 OR56A4Q8NGH8 313 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 OR9G1Q8NH87 305 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 OR5K2Q8NHB8 316 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 KIR2DL5BQ8NHK3 375 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 TMEM54Q969K7 222 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 CIDECQ96AQ7 238 aaPredicted RBP4.04□□□□□ -1.76
LINC00458-206ENST00000607494 POLR2J2Q9GZM3 115 aaKnown RBP4.04□□□□□ -1.76
LINC00458-206ENST00000607494 POLR2J3Q9H1A7 115 aaKnown RBP4.04□□□□□ -1.76
LINC00458-206ENST00000607494 SH2D2AQ9NP31 389 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 AIG1Q9NVV5 245 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 MARCH5Q9NX47 278 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 CD274Q9NZQ7 290 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 GOLT1BQ9Y3E0 138 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 PLCH2O75038 1416 aa4.04□□□□□ -1.76
LINC00458-206ENST00000607494 TMEM94Q12767 1356 aa4.03□□□□□ -1.76
LINC00458-206ENST00000607494 ADAMTS9Q9P2N4 1935 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms