RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 C1DQ13901 141 aaKnown RBP11.58□□□□□ -0.56
CTSA-213ENST00000606782 EFNB3Q15768 340 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 CEACAM16Q2WEN9 425 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 TMEM249Q2WGJ8 235 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 ZNF627Q7L945 461 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 C20orf196Q8IYI0 205 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 HS3ST5Q8IZT8 346 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 ZNF525Q8N782 197 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 LRRC75AQ8NAA5 344 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 AQP11Q8NBQ7 271 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 NUP37Q8NFH4 326 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 OR4F15Q8NGB8 312 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 OR51A7Q8NH64 312 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 NANOS1Q8WY41 292 aaKnown RBP11.58□□□□□ -0.56
CTSA-213ENST00000606782 FAM168AQ92567 244 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 ZNF837Q96EG3 531 aaPredicted RBP11.58□□□□□ -0.56
CTSA-213ENST00000606782 DCLRE1BQ9H816 532 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 CRLF2Q9HC73 371 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 CA10Q9NS85 328 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 A0A096LPE4 126 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 A0A1W2PPZ6 126 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 A8MV72 311 aaPredicted RBP11.57□□□□□ -0.56
CTSA-213ENST00000606782 ZNF99A8MXY4 864 aaPredicted RBP11.57□□□□□ -0.56
CTSA-213ENST00000606782 VWC2LB2RUY7 222 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 OR6A2O95222 327 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 BAG2O95816 211 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 HLA-DOBP13765 273 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 ANPEPP15144 967 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 ZNF26P17031 533 aaPredicted RBP11.57□□□□□ -0.56
CTSA-213ENST00000606782 AHCYP23526 432 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 CALCRP30988 508 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 ARR3P36575 388 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 DAPP51397 102 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 FXYD6P3P58550 94 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 HGFACQ04756 655 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 RPL18Q07020 188 aaKnown RBP11.57□□□□□ -0.56
CTSA-213ENST00000606782 ADIPOQQ15848 244 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 FAHD1Q6P587 224 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 RASSF6Q6ZTQ3 369 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 NANOGNBQ7Z5D8 188 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 ZDHHC13Q8IUH4 622 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 UEVLDQ8IX04 471 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 GPR137CQ8N3F9 429 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 IL17RDQ8NFM7 739 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 OR13C2Q8NGS9 318 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 MOSPD2Q8NHP6 518 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 HTRA1Q92743 480 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 FBXO17Q96EF6 278 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 NIPSNAP1Q9BPW8 284 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 KCNS3Q9BQ31 491 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 OSBPL10Q9BXB5 764 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 PLK3Q9H4B4 646 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 ZNF442Q9H7R0 627 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 YAE1D1Q9NRH1 226 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 TMEM160Q9NX00 188 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 B3GNT2Q9NY97 397 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 STX18Q9P2W9 335 aaKnown RBP11.57□□□□□ -0.56
CTSA-213ENST00000606782 REV1Q9UBZ9 1251 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 FBXO9Q9UK97 447 aaPredicted RBP11.57□□□□□ -0.56
CTSA-213ENST00000606782 NOX1Q9Y5S8 564 aa11.57□□□□□ -0.56
CTSA-213ENST00000606782 FBN1P35555 2871 aaKnown RBP11.57□□□□□ -0.56
CTSA-213ENST00000606782 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.57□□□□□ -0.561e-13■■□□□ 13.6
CTSA-213ENST00000606782 TRAV27A0A087WT01 109 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 ZNF503-AS2A6NEH8 195 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 NDUFS8O00217 210 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 RNF13O43567 381 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 MGRN1O60291 552 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 ZNF23P17027 643 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 GSTM3P21266 225 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 SNRPD2P62316 118 aaKnown RBP11.56□□□□□ -0.56
CTSA-213ENST00000606782 TUBA1BP68363 451 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 TUBA4AP68366 448 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 RFX4Q33E94 735 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 ALG10Q5BKT4 473 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 PHYHD1Q5SRE7 291 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 KDM4DQ6B0I6 523 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 TUBA1AQ71U36 451 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 TXNDC15Q96J42 360 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 SORCS2Q96PQ0 1159 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 GABARAPL1Q9H0R8 117 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 SEC61A2Q9H9S3 476 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 MYOZ1Q9NP98 299 aaPredicted RBP11.56□□□□□ -0.56
CTSA-213ENST00000606782 IL20Q9NYY1 176 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 OAZ3Q9UMX2 235 aa11.56□□□□□ -0.56
CTSA-213ENST00000606782 MALRD1Q5VYJ5 2156 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 IGHV2OR16-5A0A0B4J2B6 119 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 SLC35F4A4IF30 521 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 NPIPB13A6NJU9 1138 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 SAC3D1A6NKF1 404 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 NPIPB4C9JG80 1138 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 C11orf98E9PRG8 122 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 NDUFB2O95178 105 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 CELA3BP08861 270 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 OR4A8P0C604 315 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 USF1P22415 310 aaPredicted RBP11.55□□□□□ -0.56
CTSA-213ENST00000606782 PPOXP50336 477 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 PDLIM4P50479 330 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 RIPK1Q13546 671 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 RCN1Q15293 331 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 C6orf52Q5T4I8 152 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms