RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 SERPINA11Q86U17 422 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 CLIP4Q8N3C7 705 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 OR6S1Q8NH40 331 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 TMEM54Q969K7 222 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 WWC2-AS2Q96NR7 200 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 ARHGDIGQ99819 225 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 SH3GL3Q99963 347 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 ZNF443Q9Y2A4 671 aaPredicted RBP11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 CHST2Q9Y4C5 530 aa11.55□□□□□ -0.56
CSNK1D-219ENST00000581660 TRAV36DV7A0A075B6V5 113 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 ZNF726A6NNF4 738 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 H3BSA7 217 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 GPR37O15354 613 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 FARS2O95363 451 aaKnown RBP11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 BGNP21810 368 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 ANXA11P50995 505 aaKnown RBP11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 TNFAIP6P98066 277 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 MAD2L1Q13257 205 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 CDK5R2Q13319 367 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 CASP8Q14790 479 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 LARS2Q15031 903 aaKnown RBP11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 SLC36A2Q495M3 483 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 THEM4Q5T1C6 240 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 PXKQ7Z7A4 578 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 LDLRAD3Q86YD5 345 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 ZNF101Q8IZC7 436 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 MIER2Q8N344 545 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 MREGQ8N565 214 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 VPS37AQ8NEZ2 397 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 KLF14Q8TD94 323 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 SLC35B4Q969S0 331 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 SAMD8Q96LT4 415 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 NUF2Q9BZD4 464 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 PNPOQ9NVS9 261 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 GLTPQ9NZD2 209 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 RAB21Q9UL25 225 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 DNAH1Q9P2D7 4330 aa11.54□□□□□ -0.56
CSNK1D-219ENST00000581660 IQCMA0A1B0GVH7 501 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 DHHO43323 396 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 ICMTO60725 284 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 TSPAN9O75954 239 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 IGHV4-59P01825 116 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 SERPINE1P05121 402 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 MMP7P09237 267 aaPredicted RBP11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 ALDOCP09972 364 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 NQO1P15559 274 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 IL12AP29459 219 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 WNT5AP41221 380 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 CDKN2CP42773 168 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 FGF12P61328 243 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 PLP2Q04941 152 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 PUDPQ08623 228 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 BST1Q10588 318 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 SMU1Q2TAY7 513 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 KRT71Q3SY84 523 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 SPATA46Q5T0L3 261 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 GDPGP1Q6ZNW5 385 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 KLBQ86Z14 1044 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 FITM2Q8N6M3 262 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 OR4K5Q8NGD3 323 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 TESCQ96BS2 214 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 CCDC115Q96NT0 180 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 SPATA9Q9BWV2 254 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 SLC19A3Q9BZV2 496 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 RNF121Q9H920 327 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 TRIM33Q9UPN9 1127 aa11.53□□□□□ -0.56
CSNK1D-219ENST00000581660 THRBP10828 461 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 RPS2P15880 293 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 TNFRSF1AP19438 455 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 APLNRP35414 380 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 IER3P46695 156 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 SLC1A6P48664 564 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 RPL14P50914 215 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 UFM1P61960 85 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 GNB2P62879 340 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 HERPUD1Q15011 391 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 OXLD1Q5BKU9 147 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 LRFN4Q6PJG9 635 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 UNQ6126/PRO20091Q6UXV3 157 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 SLC16A14Q7RTX9 510 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 LRRC34Q8IZ02 419 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 RBM15BQ8NDT2 890 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 SLC25A40Q8TBP6 338 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 SGCDQ92629 289 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 PLEKHA8Q96JA3 519 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 NUDT16L1Q9BRJ7 211 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 TMEM109Q9BVC6 243 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 OR2J1Q9GZK6 312 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 MSL2Q9HCI7 577 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 MRPL39Q9NYK5 338 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 RAP2CQ9Y3L5 183 aa11.52□□□□□ -0.57
CSNK1D-219ENST00000581660 TMEM178BH3BS89 294 aa11.51□□□□□ -0.57
CSNK1D-219ENST00000581660 XPNPEP2O43895 674 aa11.51□□□□□ -0.57
CSNK1D-219ENST00000581660 BGLAPP02818 100 aa11.51□□□□□ -0.57
CSNK1D-219ENST00000581660 CBLP22681 906 aa11.51□□□□□ -0.57
CSNK1D-219ENST00000581660 COL10A1Q03692 680 aa11.51□□□□□ -0.57
CSNK1D-219ENST00000581660 EGR3Q06889 387 aa11.51□□□□□ -0.57
CSNK1D-219ENST00000581660 TTMPQ5BVD1 217 aa11.51□□□□□ -0.57
CSNK1D-219ENST00000581660 MTX3Q5HYI7 312 aa11.51□□□□□ -0.57
CSNK1D-219ENST00000581660 RFPL4BQ6ZWI9 263 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms