RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SSBP1Q04837 148 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 C11orf87Q6NUJ2 197 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 FIGNL1Q6PIW4 674 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 RBMS3Q6XE24 437 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 DGAT2L6Q6ZPD8 337 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 ZNF561Q8N587 486 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 C19orf47Q8N9M1 422 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 STOML3Q8TAV4 291 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 PHOSPHO1Q8TCT1 267 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 PMM1Q92871 262 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 TLNRD1Q9H1K6 362 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 CCDC86Q9H6F5 360 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 PRMT8Q9NR22 394 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 TMEM100Q9NV29 134 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 COMMD9Q9P000 198 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 ZNF223Q9UK11 482 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 ZC3H12DA2A288 527 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 RNF222A6NCQ9 220 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 TO15178 435 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 BRINP1O60477 761 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 GLSO94925 669 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 ZGLP1P0C6A0 271 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 CD79AP11912 226 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 BMP7P18075 431 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 PTNP21246 168 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 SLC2A5P22732 501 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 CDK2P24941 298 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 ABCD3P28288 659 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 PMELP40967 661 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 OR1Q1Q15612 314 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 PRTGQ2VWP7 1150 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 C4orf46Q504U0 113 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 WDR88Q6ZMY6 472 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 SYT13Q7L8C5 426 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 SYT9Q86SS6 491 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 NAA40Q86UY6 237 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 WDSUB1Q8N9V3 476 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 OR52R1Q8NGF1 315 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 OR4C16Q8NGL9 310 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 OR5M8Q8NGP6 311 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 TCTEX1D2Q8WW35 142 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 MNTQ99583 582 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 ADAT1Q9BUB4 502 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 EDEM2Q9BV94 578 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 MED20Q9H944 212 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 POLE3Q9NRF9 147 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 OR10H1Q9Y4A9 318 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 V9GY05 133 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 TMEM131Q92545 1883 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 A0A1B0GTI1 187 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 NKX2-2O95096 273 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 RCBTB2O95199 551 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 AKAIN1P0CW23 69 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 PNLIPRP2P54317 469 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 PCGF3Q3KNV8 242 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 LY6G6FQ5SQ64 297 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 NDUFAF7Q7L592 441 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 TDHQ8IZJ6 230 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 FAM160A2Q8N612 972 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 AVL9Q8NBF6 648 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 RLN3Q8WXF3 142 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 ZDHHC12Q96GR4 267 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 HS6ST2Q96MM7 605 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 ZNF75AQ96N20 296 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 OR14A2Q96R54 314 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 IER2Q9BTL4 223 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 WDR13Q9H1Z4 485 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 OPA3Q9H6K4 179 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 SLC35A3Q9Y2D2 325 aa12.66□□□□□ -0.38
RABGGTA-220ENST00000560998 GGT3PA6NGU5 568 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 OR5H14A6NHG9 310 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 TMEM200CA6NKL6 621 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 RIIAD1A6NNX1 92 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 OR10H2O60403 315 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 ACTL6AO96019 429 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 DLSTP36957 453 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 SIRPAP78324 504 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 PLAURQ03405 335 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 FAM76BQ5HYJ3 339 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 ZAR1Q86SH2 424 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 LSRQ86X29 649 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 GTPBP8Q8N3Z3 284 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 ZSCAN1Q8NBB4 408 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 CD180Q99467 661 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 GFI1Q99684 422 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 EXO5Q9H790 373 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 UQCC1Q9NVA1 299 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 ANKRD10Q9NXR5 420 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 GHRLQ9UBU3 117 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 OR5V1Q9UGF6 321 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 KNL1Q8NG31 2342 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 A0A0A6YYC8 382 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 A0A1W2PPK0 400 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 I3L1I5 382 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 ITGB2P05107 769 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 MRPL3P09001 348 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 MAKP20794 623 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 AGAP20933 346 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms