RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 MT-ND1P03886 318 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 SCG5P05408 212 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 TSPAN19P0C672 248 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 LSP1P33241 339 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 CRYBB2P43320 205 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 MMP15P51511 669 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 ZNF133P52736 654 aaPredicted RBP9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 ERVK-25P63136 954 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 SF3A3Q12874 501 aaKnown RBP eCLIP9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 TBC1D28Q2M2D7 210 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 SLC36A2Q495M3 483 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 C10orf128Q5T292 105 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 UGT2A3Q6UWM9 527 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 CCDC80Q76M96 950 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 PATL1Q86TB9 770 aaKnown RBP9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 PEG10Q86TG7 708 aaKnown RBP9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 CALHM3Q86XJ0 350 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 SLC26A7Q8TE54 656 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 IPCEF1Q8WWN9 437 aaPredicted RBP9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 MPP4Q96JB8 637 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 POM121L2Q96KW2 1035 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 ZNF416Q9BWM5 594 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 NPHS2Q9NP85 383 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 OPN4Q9UHM6 478 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 RIMS3Q9UJD0 308 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 FBXL3Q9UKT7 428 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 GRIP1Q9Y3R0 1128 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 MGAM2Q2M2H8 2515 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 TRRAPQ9Y4A5 3859 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 TRAV20A0A0B4J274 112 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 IQCMA0A1B0GVH7 501 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 A0A1W2PRG6 482 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 MCIDASD6RGH6 385 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 WIPF1O43516 503 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 SPRY3O43610 288 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 EGR1P18146 543 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 EPHA1P21709 976 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 STOMP27105 288 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 RAD52P43351 418 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 ZNF84P51523 738 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 PSG4Q00888 419 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 FHL1Q13642 323 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 SGCAQ16586 387 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 OTPQ5XKR4 325 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 REP15Q6BDI9 236 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 ACSM5Q6NUN0 579 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 SLC25A47Q6Q0C1 308 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 RFPL4BQ6ZWI9 263 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 IGFN1Q86VF2 1251 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 SLC25A40Q8TBP6 338 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 DYDC1Q8WWB3 177 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 GEMIN6Q8WXD5 167 aaKnown RBP9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 C22orf15Q8WYQ4 148 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 SGTBQ96EQ0 304 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 MARS2Q96GW9 593 aaKnown RBP9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 SLC6A7Q99884 636 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 SLC19A3Q9BZV2 496 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 OR2J1Q9GZK6 312 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 WNT5BQ9H1J7 359 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 POFUT1Q9H488 388 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 INIPQ9NRY2 104 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 INTS9Q9NV88 658 aaKnown RBP9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 NKIRAS2Q9NYR9 191 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 PCDHB10Q9UN67 800 aa9.8□□□□□ -0.84
PRPF40B-212ENST00000551111 A0A0A6YYJ9 748 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 A0A0G2JND7 137 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 SLC22A23A1A5C7 686 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 C5orf49A4QMS7 147 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 TPD52L2O43399 206 aaKnown RBP9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 EDF1O60869 148 aaKnown RBP9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 UBOX5O94941 541 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 PCMT1P22061 227 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 ZFP36P26651 326 aaKnown RBP9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 LAP3P28838 519 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 APLNRP35414 380 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 ZNF81P51508 661 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 TAS2R41P59536 307 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 SELENOVP59797 346 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 HILS1P60008 231 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 LCN2P80188 198 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 MRPS34P82930 218 aaKnown RBP9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 HSF2Q03933 536 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 PLP2Q04941 152 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 TOP3AQ13472 1001 aaPredicted RBP9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 SHQ1Q6PI26 577 aaKnown RBP9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 MICU2Q8IYU8 434 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 ZDHHC22Q8N966 263 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 LRRC75AQ8NAA5 344 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 OR1J2Q8NGS2 313 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 KLF14Q8TD94 323 aaPredicted RBP9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 SNX33Q8WV41 574 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 TMEM239Q8WW34 195 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 CCL17Q92583 94 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 MAGEB18Q96M61 343 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 ZNF583Q96ND8 569 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 C1QTNF5Q9BXJ0 243 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 BCL2L14Q9BZR8 327 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 RABEP2Q9H5N1 569 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 SAP30LQ9HAJ7 183 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 SIAEQ9HAT2 523 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms