RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SPDEFO95238 335 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 PGCP20142 388 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 POU3F2P20265 443 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 BCKDHBP21953 392 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 DPP4P27487 766 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 ARHGDIBP52566 201 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 ZP1P60852 638 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 BTG1P62324 171 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 HSF2Q03933 536 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 CAMK2DQ13557 499 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 C2orf76Q3KRA6 126 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 DCXRQ7Z4W1 244 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 COMMD7Q86VX2 200 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 PRSS35Q8N3Z0 413 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 OR4C16Q8NGL9 310 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 ELL3Q9HB65 397 aaPredicted RBP12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 CKLFQ9UBR5 152 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 FBXL2Q9UKC9 423 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 FBXO4Q9UKT5 387 aa12.34□□□□□ -0.43
PRPF40B-209ENST00000548825 LOC101059948A0A1B0GTJ6 334 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 TMEM235A6NFC5 223 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 SIGLEC5O15389 551 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 ZNF35P13682 527 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 CAPZA2P47755 286 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 SIGLEC14Q08ET2 396 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 TEX261Q6UWH6 196 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 ASB12Q8WXK4 309 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 SLC46A1Q96NT5 459 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 ICAM5Q9UMF0 924 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 HIF3AQ9Y2N7 669 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 U3KQ87 197 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 THADAQ6YHU6 1953 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 MASP2O00187 686 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 SLC22A5O76082 557 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 AMY2AP04746 511 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 CD2P06729 351 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 ALOX5APP20292 161 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 PER3P56645 1201 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 HSD11B2P80365 405 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 C1orf140Q5VVS0 124 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 CREB3L2Q70SY1 520 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 FAM109AQ8N4B1 249 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 OR5D18Q8NGL1 313 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 FAM3DQ96BQ1 224 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 SLC2A4RGQ9NR83 387 aa12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 AKAP7Q9P0M2 348 aaPredicted RBP12.33□□□□□ -0.44
PRPF40B-209ENST00000548825 TMEM269A0A1B0GVZ9 245 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 GABARAPH6UMI1 98 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 IL33O95760 270 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 VAMP1P23763 118 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 MAPK3P27361 379 aaPredicted RBP12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 CDAP32320 146 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 DHPSP49366 369 aaPredicted RBP12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 RIDAP52758 137 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 TLE3Q04726 772 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 EBPQ15125 230 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 TAF13Q15543 124 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 RAB11BQ15907 218 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 ZBTB37Q5TC79 503 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 SLC18B1Q6NT16 456 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 TAS2R5Q9NYW4 299 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 PLEKHA6Q9Y2H5 1048 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 ACOT7O00154 380 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 TSPAN4O14817 238 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 KCNAB3O43448 404 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 ALOX12BO75342 701 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 CRYZL1O95825 349 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 P2RX3P56373 397 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 C19orf57Q0VDD7 668 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 CD276Q5ZPR3 534 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 TIGD3Q6B0B8 471 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 LINC00114Q6XXX2 140 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 FAM122BQ7Z309 247 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 CCDC28AQ8IWP9 274 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 OR10H5Q8NGA6 315 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 NARS2Q96I59 477 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 ABHD6Q9BV23 337 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 LANCL2Q9NS86 450 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 OR4C45A6NMZ5 311 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 MPC2O95563 127 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 RAF1P04049 648 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 NME1P15531 152 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 PTBP1P26599 531 aaKnown RBP eCLIP12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 KIR3DL2P43630 455 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 TNK1Q13470 666 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 C14orf28Q4W4Y0 310 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 PHF19Q5T6S3 580 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 GDF15Q99988 308 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 WWTR1Q9GZV5 400 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 TTC28Q96AY4 2481 aa12.32□□□□□ -0.44
PRPF40B-209ENST00000548825 PRSS37A4D1T9 235 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 ZNF354AO60765 605 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 HEXBP07686 556 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 GALP22466 123 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 PRSS3P35030 304 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 SORDQ00796 357 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 INSM1Q01101 510 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 C2orf68Q2NKX9 166 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 TOR2AQ5JU69 321 aa12.31□□□□□ -0.44
PRPF40B-209ENST00000548825 ZNF767PQ75MW2 155 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms