RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 BMP4P12644 408 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 NPR2P20594 1047 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 LAP3P28838 519 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 SLC6A6P31641 620 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 SERPINF1P36955 418 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 LIMS1P48059 325 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 RASSF2P50749 326 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 HGFACQ04756 655 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 BNIP1Q12981 228 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 CARTPTQ16568 116 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 RFX4Q33E94 735 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 MESTQ5EB52 335 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 SLC35F1Q5T1Q4 408 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 C1QTNF12Q5T7M4 302 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 FAM205BPQ63HN1 556 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 OR2T5Q6IEZ7 315 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 ZNF544Q6NX49 715 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 LEG1Q6P5S2 330 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 SLC25A47Q6Q0C1 308 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 DPY19L2P2Q6ZN68 376 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 LRRC75A-AS1Q8N1F1 130 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 IL17RDQ8NFM7 739 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 OR4F15Q8NGB8 312 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 OR2T29Q8NH02 315 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 AKR7LQ8NHP1 331 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 ZNF519Q8TB69 540 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 CANT1Q8WVQ1 401 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 GSX2Q9BZM3 304 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 OR52D1Q9H346 318 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 MAGIXQ9H6Y5 334 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 EGLN3Q9H6Z9 239 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 SIAEQ9HAT2 523 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 CDH20Q9HBT6 801 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 SRA1Q9HD15 236 aaKnown RBP9.58□□□□□ -0.88
DDB1-222ENST00000543627 EMC7Q9NPA0 242 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 ZNF224Q9NZL3 707 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 CRNNQ9UBG3 495 aaPredicted RBP9.58□□□□□ -0.88
DDB1-222ENST00000543627 LYVE1Q9Y5Y7 322 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 CELSR1Q9NYQ6 3014 aa9.58□□□□□ -0.88
DDB1-222ENST00000543627 SLC22A23A1A5C7 686 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 PRSS37A4D1T9 235 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 FAM171A2A8MVW0 826 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 E2F6O75461 281 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 RENP00797 406 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 SERPINA5P05154 406 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 LCKP06239 509 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 ZNF14P17017 642 aaPredicted RBP9.57□□□□□ -0.88
DDB1-222ENST00000543627 ZNF32P17041 273 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 APEX1P27695 318 aaKnown RBP9.57□□□□□ -0.88
DDB1-222ENST00000543627 SDHAP31040 664 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 APLNRP35414 380 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 NUDT6P53370 316 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 SNRPD2P62316 118 aaKnown RBP9.57□□□□□ -0.88
DDB1-222ENST00000543627 DBPQ10586 325 aaPredicted RBP9.57□□□□□ -0.88
DDB1-222ENST00000543627 CLEC12BQ2HXU8 276 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 TBC1D28Q2M2D7 210 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 ALKBH6Q3KRA9 238 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 C3orf36Q3SXR2 165 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 PABPC1L2AQ5JQF8 200 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 C10orf128Q5T292 105 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 GPR139Q6DWJ6 353 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 C1orf94Q6P1W5 598 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 PGBD2Q6P3X8 592 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 UGT2A3Q6UWM9 527 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 ZNF627Q7L945 461 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 ADGRG5Q8IZF4 528 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 SVOPLQ8N434 492 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 FAM169BQ8N8A8 192 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 AQP11Q8NBQ7 271 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 SLC30A7Q8NEW0 376 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 OR4K13Q8NH42 304 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 FNDC8Q8TC99 324 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 FUZQ9BT04 418 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 CADM1Q9BY67 442 aaKnown RBP9.57□□□□□ -0.88
DDB1-222ENST00000543627 SYT4Q9H2B2 425 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 LRMDAQ9H2I8 198 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 PLK3Q9H4B4 646 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 NRIP3Q9NQ35 241 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 VNN3Q9NY84 501 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 DUSP13Q9UII6 198 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 POMPQ9Y244 141 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 COA3Q9Y2R0 106 aaPredicted RBP9.57□□□□□ -0.88
DDB1-222ENST00000543627 ARID1AO14497 2285 aa9.57□□□□□ -0.88
DDB1-222ENST00000543627 RAI1Q7Z5J4 1906 aaPredicted RBP9.56□□□□□ -0.88
DDB1-222ENST00000543627 NPIPB13A6NJU9 1138 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 AQP12BA6NM10 295 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 NPIPB4C9JG80 1138 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 H7C1Q1 480 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 OVOL3O00110 214 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 GPRIN2O60269 458 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 KHDRBS3O75525 346 aaKnown RBP9.56□□□□□ -0.88
DDB1-222ENST00000543627 ATP5HO75947 161 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 LY6HO94772 140 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 MPZL1O95297 269 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 SOX14O95416 240 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 GPANK1O95872 356 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 PTHP01270 115 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 IGHV4-39P01824 125 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 HLA-DQA2P01906 255 aa9.56□□□□□ -0.88
DDB1-222ENST00000543627 IGFBP1P08833 259 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms