RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 SYT9Q86SS6 491 aa9□□□□□ -0.97
USP35-201ENST00000526425 TRIM2Q9C040 744 aa9□□□□□ -0.97
USP35-201ENST00000526425 ENKD1Q9H0I2 346 aa9□□□□□ -0.97
USP35-201ENST00000526425 UCK1Q9HA47 277 aa9□□□□□ -0.97
USP35-201ENST00000526425 EMC7Q9NPA0 242 aa9□□□□□ -0.97
USP35-201ENST00000526425 DLL4Q9NR61 685 aa9□□□□□ -0.97
USP35-201ENST00000526425 CDV3Q9UKY7 258 aaKnown RBP9□□□□□ -0.97
USP35-201ENST00000526425 CEP250Q9BV73 2442 aa9□□□□□ -0.97
USP35-201ENST00000526425 TVP23AA6NH52 213 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 BCAT2O15382 392 aaPredicted RBP8.99□□□□□ -0.97
USP35-201ENST00000526425 KRT33AO76009 404 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 SCG5P05408 212 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 DAOP14920 347 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 UBE2MP61081 183 aaKnown RBP8.99□□□□□ -0.97
USP35-201ENST00000526425 TRA2AQ13595 282 aaKnown RBP eCLIP8.99□□□□□ -0.97
USP35-201ENST00000526425 SF3A2Q15428 464 aaKnown RBP8.99□□□□□ -0.97
USP35-201ENST00000526425 LRRTM1Q86UE6 522 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 OR4C3Q8NH37 302 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 SCARB1Q8WTV0 552 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 DIO2Q92813 273 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 CPNE4Q96A23 557 aaPredicted RBP8.99□□□□□ -0.97
USP35-201ENST00000526425 RAB3CQ96E17 227 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 ISG20L2Q9H9L3 353 aaKnown RBP8.99□□□□□ -0.97
USP35-201ENST00000526425 COPS7AQ9UBW8 275 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 PI4KAP42356 2102 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 TICRRQ7Z2Z1 1910 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 SYT5O00445 386 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 LAMTOR5O43504 91 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 EPPINO95925 133 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 RLN1P04808 185 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 SNRNP70P08621 437 aaKnown RBP8.99□□□□□ -0.97
USP35-201ENST00000526425 CXCR1P25024 350 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 SLC6A6P31641 620 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 SNRPGP62308 76 aaKnown RBP8.99□□□□□ -0.97
USP35-201ENST00000526425 ARHGAP11BQ3KRB8 267 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 ZNF770Q6IQ21 691 aaPredicted RBP8.99□□□□□ -0.97
USP35-201ENST00000526425 GSG1LQ6UXU4 331 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 ZNF620Q6ZNG0 422 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 LINGO2Q7L985 606 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 UBALD2Q8IYN6 164 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 TOMM5Q8N4H5 51 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 SAMD12Q8N8I0 201 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 OR10J5Q8NHC4 309 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 SENP5Q96HI0 755 aaPredicted RBP8.99□□□□□ -0.97
USP35-201ENST00000526425 C4orf36Q96KX1 117 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 MARVELD1Q9BSK0 173 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 OR10A5Q9H207 317 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 KCND3Q9UK17 655 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 KCNIP3Q9Y2W7 256 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 ZIC2O95409 532 aaPredicted RBP8.99□□□□□ -0.97
USP35-201ENST00000526425 CPT2P23786 658 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 TMEM71Q6P5X7 295 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 THSD4Q6ZMP0 1018 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 QSOX2Q6ZRP7 698 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 MED25Q71SY5 747 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 C16orf52Q8NHV5 167 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 GPBAR1Q8TDU6 330 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 THEM6Q8WUY1 208 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 ORAI1Q96D31 301 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 THAP7Q9BT49 309 aaPredicted RBP8.99□□□□□ -0.97
USP35-201ENST00000526425 MIXL1Q9H2W2 232 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 CBLCQ9ULV8 474 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 REV3LO60673 3130 aa8.99□□□□□ -0.97
USP35-201ENST00000526425 PLXNA2O75051 1894 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 PRAMEF2O60811 474 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 DIRAS3O95661 229 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 CXCL2P19875 107 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 CD1CP29017 333 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 AFF3P51826 1226 aaKnown RBP8.98□□□□□ -0.97
USP35-201ENST00000526425 RAB40BQ12829 278 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 NHLRC3Q5JS37 347 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 MZT2AQ6P582 158 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 ETV3LQ6ZN32 361 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 LRRC18Q8N456 261 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 FAM26EQ8N5C1 309 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 MORN4Q8NDC4 146 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 PAQR8Q8TEZ7 354 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 RFT1Q96AA3 541 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 SCARF2Q96GP6 870 aaPredicted RBP8.98□□□□□ -0.97
USP35-201ENST00000526425 TSSK2Q96PF2 358 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 NMNAT3Q96T66 252 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 TAPBPLQ9BX59 468 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 CDCA4Q9BXL8 241 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 MEPEQ9NQ76 525 aaPredicted RBP8.98□□□□□ -0.97
USP35-201ENST00000526425 TRIM36Q9NQ86 728 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 SH3BGRL2Q9UJC5 107 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 AUP1Q9Y679 476 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 hCG_1809904A0A1W2PP81 198 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 A0A1W2PR64 198 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 A0A1W2PRV1 198 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 MCIDASD6RGH6 385 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 DOK2O60496 412 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 SELENOFO60613 162 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 TBX19O60806 448 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 MBPP02686 304 aaPredicted RBP8.98□□□□□ -0.97
USP35-201ENST00000526425 FGF2P09038 288 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 SLC35E2P0CK97 266 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 HTR2AP28223 471 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 S100A11P31949 105 aa8.98□□□□□ -0.97
USP35-201ENST00000526425 ADH7P40394 386 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms