RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 MSR1P21757 451 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 CDAP32320 146 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 CDKN2AP42771 156 aaKnown RBP13.06□□□□□ -0.32
RNF4-210ENST00000508235 PTDSS1P48651 473 aaKnown RBP13.06□□□□□ -0.32
RNF4-210ENST00000508235 IDH3GP51553 393 aaPredicted RBP13.06□□□□□ -0.32
RNF4-210ENST00000508235 PCBD1P61457 104 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 RAB1AP62820 205 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 NAAAQ02083 359 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 PIGFQ07326 219 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 SGCAQ16586 387 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 ZNF672Q499Z4 452 aaPredicted RBP13.06□□□□□ -0.32
RNF4-210ENST00000508235 FAM27BQ5VT28 67 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 LEG1Q6P5S2 330 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 FOXL2NBQ6ZUU3 175 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 ZDHHC13Q8IUH4 622 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 SVOPLQ8N434 492 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 LNX2Q8N448 690 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 ZNF611Q8N823 705 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 KBTBD8Q8NFY9 601 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 CENPNQ96H22 339 aaPredicted RBP13.06□□□□□ -0.32
RNF4-210ENST00000508235 SH3GL3Q99963 347 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 TSSK6Q9BXA6 273 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 TEX12Q9BXU0 123 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 PLA2G12AQ9BZM1 189 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 C1orf198Q9H425 327 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 NTN4Q9HB63 628 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 FAIMQ9NVQ4 179 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 ZNF224Q9NZL3 707 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 UGT2A1Q9Y4X1 527 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 CELSR2Q9HCU4 2923 aa13.06□□□□□ -0.32
RNF4-210ENST00000508235 ZNF503-AS2A6NEH8 195 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 TMCC2O75069 709 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 SOX14O95416 240 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 IFNGP01579 166 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 ZNF23P17027 643 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 PRKACGP22612 351 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 LAP3P28838 519 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 GIPRP48546 466 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 CDH11P55287 796 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 PLP2Q04941 152 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.05□□□□□ -0.32
RNF4-210ENST00000508235 PTCHD4Q6ZW05 846 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 GLB1L2Q8IW92 636 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 HS3ST5Q8IZT8 346 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 LRRC18Q8N456 261 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 OR52E2Q8NGJ4 325 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 OR4K13Q8NH42 304 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 PYDC1Q8WXC3 89 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 NRGNQ92686 78 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 PIGTQ969N2 578 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 NABP1Q96AH0 204 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 NMNAT3Q96T66 252 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 POLE4Q9NR33 117 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 CISD1Q9NZ45 108 aaKnown RBP13.05□□□□□ -0.32
RNF4-210ENST00000508235 KLHL21Q9UJP4 597 aa13.05□□□□□ -0.32
RNF4-210ENST00000508235 IQCMA0A1B0GVH7 501 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 C12orf71A8MTZ7 269 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 SERPINA5P05154 406 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 CST2P09228 141 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 OSMP13725 252 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 CTLA4P16410 223 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 ZNF14P17017 642 aaPredicted RBP13.04□□□□□ -0.32
RNF4-210ENST00000508235 GLO1Q04760 184 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 SPOCK1Q08629 439 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 SLC36A3Q495N2 470 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 SLC35F1Q5T1Q4 408 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 SLC27A4Q6P1M0 643 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 FAHD1Q6P587 224 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 AMIGO2Q86SJ2 522 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 SYT9Q86SS6 491 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 OR4F15Q8NGB8 312 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 OR8D4Q8NGM9 314 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 LILRB1Q8NHL6 650 aaPredicted RBP13.04□□□□□ -0.32
RNF4-210ENST00000508235 LRTOMTQ8WZ04 291 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 CCL19Q99731 98 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 OSBPL10Q9BXB5 764 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 NUAK2Q9H093 628 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 RACGAP1Q9H0H5 632 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 LIME1Q9H400 295 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 RERGLQ9H628 205 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 PAPOLBQ9NRJ5 636 aaKnown RBP13.04□□□□□ -0.32
RNF4-210ENST00000508235 REV1Q9UBZ9 1251 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 ENOPH1Q9UHY7 261 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 MOKQ9UQ07 419 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 PLEKHA6Q9Y2H5 1048 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 SPEF1Q9Y4P9 236 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 FKBP7Q9Y680 259 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 ATP23Q9Y6H3 246 aa13.04□□□□□ -0.32
RNF4-210ENST00000508235 DSCAMO60469 2012 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 RIIAD1A6NNX1 92 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 VSTM5A8MXK1 200 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 ATP6V1G2-DDX39BF2Z307 99 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 ATE1O95260 518 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 TP53P04637 393 aaPredicted RBP13.03□□□□□ -0.32
RNF4-210ENST00000508235 ZNF3P17036 446 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 GRK5P34947 590 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 LSM6P62312 80 aaKnown RBP13.03□□□□□ -0.32
RNF4-210ENST00000508235 HSF2Q03933 536 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 ETFDHQ16134 617 aa13.03□□□□□ -0.32
RNF4-210ENST00000508235 ZSCAN26Q16670 478 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms