RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SYCE1Q8N0S2 351 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 HSD17B11Q8NBQ5 300 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR10H4Q8NGA5 316 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR4A15Q8NGL6 344 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR1N2Q8NGR9 330 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR9G1Q8NH87 305 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 NDNFQ8TB73 568 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 SDR42E1Q8WUS8 393 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 ISOC2Q96AB3 205 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 FAM131CQ96AQ9 280 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 APH1AQ96BI3 265 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 DUS3LQ96G46 650 aaKnown RBP2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZBED3Q96IU2 234 aaPredicted RBP2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR5B12Q96R08 314 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 NICN1Q9BSH3 213 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 DEFB129Q9H1M3 183 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR51J1Q9H342 316 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF702PQ9H963 129 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 BEX1Q9HBH7 125 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 YARS2Q9Y2Z4 477 aaKnown RBP2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 KPTNQ9Y664 436 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 GMEB1Q9Y692 573 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 ADGRA3Q8IWK6 1321 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF816-ZNF321PA0A0X1KG74 233 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF726A6NNF4 738 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 PDZK1P1A8MUH7 402 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 ETHE1O95571 254 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 IGHV3-23P01764 117 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 HPNP05981 417 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 CT45A6P0DMU7 189 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 CT45A5P0DMU8 189 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 CT45A7P0DMV0 189 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 GABRR2P28476 465 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR1E1P30953 314 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 SERPINB5P36952 375 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 MEOX2P50222 304 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 UBE2MP61081 183 aaKnown RBP2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 RPS15AP62244 130 aaKnown RBP2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 USF2Q15853 346 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 TRMT5Q32P41 509 aaKnown RBP2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 CT45A1Q5HYN5 189 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 TPRG1LQ5T0D9 272 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 ATAD3CQ5T2N8 411 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 SPECC1LQ69YQ0 1117 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 SLC35D2Q76EJ3 337 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 SNX20Q7Z614 316 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZADH2Q8N4Q0 377 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 KLHL30-AS1Q8NEE0 82 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR2A1Q8NGT9 310 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR10R2Q8NGX6 335 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 CT45A3Q8NHU0 189 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 RHOXF1Q8NHV9 184 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 NUBPLQ8TB37 319 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 ASZ1Q8WWH4 475 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 EEF1AKMT3Q96AZ1 226 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 SERPINB12Q96P63 405 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 KCNS3Q9BQ31 491 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 SYNDIG1Q9H7V2 258 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 MRM3Q9HC36 420 aaKnown RBP2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 CD209Q9NNX6 404 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 AGPAT4Q9NRZ5 378 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 CLN6Q9NWW5 311 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 XCL2Q9UBD3 114 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 VSIG4Q9Y279 399 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 RCL1Q9Y2P8 373 aaKnown RBP2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 SLC25A15Q9Y619 301 aa2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 COL22A1Q8NFW1 1626 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC13-208ENST00000505553 MAP3K19Q56UN5 1328 aa2.9□□□□□ -1.94
TRAPPC13-208ENST00000505553 AQRO60306 1485 aaKnown RBP eCLIP2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 IGKV3D-15A0A087WSY6 115 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 TRAV39A0A0B4J263 110 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 A0A1W2PRF3 423 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 A0A1W2PRM7 423 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 ERICH2A1L162 156 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 F6UB75 175 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 SLC9A3R1O14745 358 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 FKBP6O75344 327 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 CGAP01215 116 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 CAPN2P17655 700 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 PSMB1P20618 241 aaKnown RBP2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 SHC1P29353 583 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 CFHR2P36980 270 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 SPAM1P38567 509 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 RFC3P40938 356 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 CSKP41240 450 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 GPR4P46093 362 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 CCR8P51685 355 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 PSMC5P62195 406 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 TNNC1P63316 161 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 IRX3P78415 501 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 SLC25A11Q02978 314 aaKnown RBP2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 KIAA0040Q15053 153 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 RPEL1Q2QD12 228 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 ADNP2Q6IQ32 1131 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 PAMR1Q6UXH9 720 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 MBOAT1Q6ZNC8 495 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 ZNF677Q86XU0 584 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 ZNF547Q8IVP9 402 aa2.9□□□□□ -1.95
TRAPPC13-208ENST00000505553 TRAM1L1Q8N609 369 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms