RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 SNTNA6NMZ2 147 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 B4GALT1P15291 398 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 OPRM1P35372 400 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 RPS27P42677 84 aaKnown RBP17.06■□□□□ 0.32
USP39-218ENST00000493829 MTNR1AP48039 350 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 GLO1Q04760 184 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 SLC35D3Q5M8T2 416 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 C10orf128Q5T292 105 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 UGT2A3Q6UWM9 527 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 AHSA2Q719I0 299 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 ERI1Q8IV48 349 aaKnown RBP17.06■□□□□ 0.32
USP39-218ENST00000493829 GLB1L2Q8IW92 636 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 SGCDQ92629 289 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 CCDC120Q96HB5 630 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 WDR76Q9H967 626 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 PLSCR4Q9NRQ2 329 aa17.06■□□□□ 0.32
USP39-218ENST00000493829 SCG5P05408 212 aa17.05■□□□□ 0.32
USP39-218ENST00000493829 GAAP10253 952 aa17.05■□□□□ 0.32
USP39-218ENST00000493829 ATP6V1E1P36543 226 aa17.05■□□□□ 0.32
USP39-218ENST00000493829 TEKQ02763 1124 aa17.05■□□□□ 0.32
USP39-218ENST00000493829 TSC22D1Q15714 1073 aa17.05■□□□□ 0.32
USP39-218ENST00000493829 SGCAQ16586 387 aa17.05■□□□□ 0.32
USP39-218ENST00000493829 RELL2Q8NC24 303 aaPredicted RBP17.05■□□□□ 0.32
USP39-218ENST00000493829 WARS2Q9UGM6 360 aaKnown RBP17.05■□□□□ 0.32
USP39-218ENST00000493829 MOKQ9UQ07 419 aa17.05■□□□□ 0.32
USP39-218ENST00000493829 RPL36Q9Y3U8 105 aaKnown RBP17.05■□□□□ 0.32
USP39-218ENST00000493829 COMMD3-BMI1R4GMX3 469 aa17.05■□□□□ 0.32
USP39-218ENST00000493829 INTS1Q8N201 2190 aaKnown RBP17.05■□□□□ 0.32
USP39-218ENST00000493829 PTGES3LE9PB15 166 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 DVL2O14641 736 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 LYZL6O75951 148 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 TFP02787 698 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 ITGA5P08648 1049 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 LAP3P28838 519 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 ZNF133P52736 654 aaPredicted RBP17.04■□□□□ 0.32
USP39-218ENST00000493829 ARF1P84077 181 aaKnown RBP17.04■□□□□ 0.32
USP39-218ENST00000493829 ADORA2A-AS1P86434 159 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 PIGFQ07326 219 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 KLHL24Q6TFL4 600 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 ZNF540Q8NDQ6 660 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 SLC26A10Q8NG04 563 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 OR4F15Q8NGB8 312 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 C11orf40Q8WZ69 217 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 LGALS12Q96DT0 336 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 CNN2Q99439 309 aaKnown RBP17.04■□□□□ 0.32
USP39-218ENST00000493829 FOXB1Q99853 325 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 TTTY10Q9BZA0 68 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 ADGRL4Q9HBW9 690 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 PAK1IP1Q9NWT1 392 aaPredicted RBP17.04■□□□□ 0.32
USP39-218ENST00000493829 MRPL22Q9NWU5 206 aaKnown RBP17.04■□□□□ 0.32
USP39-218ENST00000493829 CHD6Q8TD26 2715 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 A0A096LPE4 126 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 A0A1B0GUH1 482 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 A0A1W2PPZ6 126 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 SPARCP09486 303 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 CD8BP10966 210 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 PSKH1P11801 424 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 IGHV1-2P23083 117 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 CHN2P52757 468 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 ADAM8P78325 824 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 ZNF813Q6ZN06 617 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 Q6ZT83 130 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 ABHD12BQ7Z5M8 362 aaPredicted RBP17.04■□□□□ 0.32
USP39-218ENST00000493829 LRRC18Q8N456 261 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 OR6N2Q8NGY6 317 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 TBX5Q99593 518 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 TMEM38BQ9NVV0 291 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 SCN3BQ9NY72 215 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 ZNF629Q9UEG4 869 aaPredicted RBP17.04■□□□□ 0.32
USP39-218ENST00000493829 POLR1DQ9Y2S0 133 aa17.04■□□□□ 0.32
USP39-218ENST00000493829 POLEQ07864 2286 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 FAM90A27PA6NNH2 459 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 ZNF99A8MXY4 864 aaPredicted RBP17.03■□□□□ 0.32
USP39-218ENST00000493829 RAD51DO75771 328 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 IL18BPO95998 194 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 CRHBPP24387 322 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 EEF1B2P24534 225 aaKnown RBP17.03■□□□□ 0.32
USP39-218ENST00000493829 HCCSP53701 268 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 HSF2Q03933 536 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 C4orf17Q53FE4 359 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 RBM48Q5RL73 367 aaKnown RBP17.03■□□□□ 0.32
USP39-218ENST00000493829 ZNF474Q6S9Z5 364 aaPredicted RBP17.03■□□□□ 0.32
USP39-218ENST00000493829 CXorf67Q86X51 503 aaPredicted RBP17.03■□□□□ 0.32
USP39-218ENST00000493829 LINC00346Q8IVM7 164 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 OR10H5Q8NGA6 315 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 GGHQ92820 318 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 NABP1Q96AH0 204 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 INTS14Q96SY0 518 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 SH3GL3Q99963 347 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 POLE4Q9NR33 117 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 PSORS1C1Q9UIG5 152 aa17.03■□□□□ 0.32
USP39-218ENST00000493829 RPL36A-HNRNPH2H7BZ11 118 aa17.02■□□□□ 0.32
USP39-218ENST00000493829 MPGP29372 298 aa17.02■□□□□ 0.32
USP39-218ENST00000493829 GUCA1AP43080 201 aaPredicted RBP17.02■□□□□ 0.32
USP39-218ENST00000493829 GGTLC2Q14390 218 aa17.02■□□□□ 0.32
USP39-218ENST00000493829 GABRG1Q8N1C3 465 aa17.02■□□□□ 0.32
USP39-218ENST00000493829 OR10H4Q8NGA5 316 aa17.02■□□□□ 0.32
USP39-218ENST00000493829 PIGMQ9H3S5 423 aa17.02■□□□□ 0.32
USP39-218ENST00000493829 COQ3Q9NZJ6 369 aa17.02■□□□□ 0.32
USP39-218ENST00000493829 MYRFQ9Y2G1 1151 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms