RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 RIPK1Q13546 671 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 CUL1Q13616 776 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 FCN2Q15485 313 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 DCST2Q5T1A1 773 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 SPECC1LQ69YQ0 1117 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 IGFL2Q6UWQ7 119 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 ZNF600Q6ZNG1 722 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 C16orf62Q7Z3J2 963 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 RAB43Q86YS6 212 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 ZNF683Q8IZ20 524 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 ZCCHC7Q8N3Z6 543 aaKnown RBP3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 CSNK1A1LQ8N752 337 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 POM121L12Q8N7R1 296 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 EIF1ADQ8N9N8 165 aaKnown RBP3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 OR2L2Q8NH16 312 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 ADAMTS16Q8TE57 1224 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 DDI1Q8WTU0 396 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 FBXO32Q969P5 355 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 SH3YL1Q96HL8 342 aaPredicted RBP3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 PPP1R16AQ96I34 528 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 ATOH8Q96SQ7 321 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 PKMYT1Q99640 499 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 CAPS2Q9BXY5 557 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 LRRC40Q9H9A6 602 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 WRAP73Q9P2S5 460 aaPredicted RBP3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 EXTL2Q9UBQ6 330 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 RSPH14Q9UHP6 348 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 GGA2Q9UJY4 613 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 HPCAL4Q9UM19 191 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 RRP15Q9Y3B9 282 aaKnown RBP3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 DNAH7Q8WXX0 4024 aa3.73□□□□□ -1.81
SSX2IP-208ENST00000490476 PCNX3Q9H6A9 2034 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 TRIM64CA6NLI5 447 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 E9PLD3 99 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 UBFD1O14562 309 aaKnown RBP3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 TBX6O95947 436 aaPredicted RBP3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 PRB2P02812 416 aaPredicted RBP3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 FREM3P0C091 2139 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 SLC35E2P0CK97 266 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 CT45A10P0DMU9 189 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 TPSB2P20231 275 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 TBXA2RP21731 343 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 IGFBP5P24593 272 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 SHC1P29353 583 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 AIF1P55008 147 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 SERTAD2Q14140 314 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 ZMYND11Q15326 602 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 TPSAB1Q15661 275 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 FAM120AOSQ5T036 256 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 TMEM225Q6GV28 225 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 OTUD6AQ7L8S5 288 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 DOLPP1Q86YN1 238 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 ZNF679Q8IYX0 411 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 CLDN19Q8N6F1 224 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 SYT14Q8NB59 555 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 OR51G2Q8NGK0 314 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 OR5L2Q8NGL0 311 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 TFB1MQ8WVM0 346 aaKnown RBP3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 AMDHD1Q96NU7 426 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 PSKH2Q96QS6 385 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 TSSK1BQ9BXA7 367 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 DUSP16Q9BY84 665 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 GLT8D2Q9H1C3 349 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 SLC17A5Q9NRA2 495 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 PNO1Q9NRX1 252 aaKnown RBP3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 PAK1IP1Q9NWT1 392 aaPredicted RBP3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 COX16Q9P0S2 106 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 OARD1Q9Y530 152 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 MAB21L2Q9Y586 359 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 IKBKGQ9Y6K9 419 aa3.72□□□□□ -1.81
SSX2IP-208ENST00000490476 A8MX80 341 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 SRRM5B3KS81 715 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 F8VP50 259 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 G3V4G9 280 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 ARPC3O15145 178 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 SNNO75324 88 aaPredicted RBP3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 GAS8-AS1O95177 125 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 CCDC166P0CW27 439 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 CXCL8P10145 99 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 FOLR2P14207 255 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 ZNF44P15621 663 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 PGCP20142 388 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 BCL3P20749 454 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 IL2RGP31785 369 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 RPL34P49207 117 aaKnown RBP3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 AP3M2P53677 418 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 MLF1P58340 268 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 VLDLRP98155 873 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 KCNJ11Q14654 390 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 PDK3Q15120 406 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 SLC5A12Q1EHB4 618 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 CLEC12BQ2HXU8 276 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 EIPR1Q53HC9 387 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 SPATA46Q5T0L3 261 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 PIP5KL1Q5T9C9 394 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 CCDC80Q76M96 950 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 VSTM4Q8IW00 320 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 ZNF485Q8NCK3 441 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 CATSPER1Q8NEC5 780 aa3.71□□□□□ -1.82
SSX2IP-208ENST00000490476 OR9A4Q8NGU2 314 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms