RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PCDH7O60245 1069 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 SUPT3HO75486 399 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 CRCPO75575 148 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 URI1O94763 535 aaPredicted RBP5.16□□□□□ -1.58
HDAC3-206ENST00000471968 PTHP01270 115 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 SPARCP09486 303 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 IRF2P14316 349 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 APLNRP35414 380 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 POU3F4P49335 361 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 HADHBP55084 474 aaKnown RBP5.16□□□□□ -1.58
HDAC3-206ENST00000471968 PPP1CBP62140 327 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 PLP2Q04941 152 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 PSG7Q13046 419 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 CRYMQ14894 314 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 SMU1Q2TAY7 513 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 NCR3LG1Q68D85 454 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 SFRP4Q6FHJ7 346 aaPredicted RBP5.16□□□□□ -1.58
HDAC3-206ENST00000471968 RFPL4BQ6ZWI9 263 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 ZNF551Q7Z340 670 aaPredicted RBP5.16□□□□□ -1.58
HDAC3-206ENST00000471968 ZER1Q7Z7L7 766 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 GALNT7Q86SF2 657 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 EGFL6Q8IUX8 553 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 TMEM123Q8N131 208 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 Q8N1Y9 231 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 OSR2Q8N2R0 312 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 MIER2Q8N344 545 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 FGFRL1Q8N441 504 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 HIPK4Q8NE63 616 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 OR10AD1Q8NGE0 317 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 CDC26Q8NHZ8 85 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 ABHD4Q8TB40 342 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 MEGF10Q96KG7 1140 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 MS4A4EQ96PG1 132 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 SH3GL3Q99963 347 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 TAPBPLQ9BX59 468 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 IPPKQ9H8X2 491 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 ISYNA1Q9NPH2 558 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 FARSBQ9NSD9 589 aaKnown RBP5.16□□□□□ -1.58
HDAC3-206ENST00000471968 ZFP57Q9NU63 452 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 ANO10Q9NW15 660 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.16□□□□□ -1.58
HDAC3-206ENST00000471968 EIF3KQ9UBQ5 218 aaKnown RBP5.16□□□□□ -1.58
HDAC3-206ENST00000471968 OSGIN1Q9UJX0 560 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 SF3B6Q9Y3B4 125 aaKnown RBP5.16□□□□□ -1.58
HDAC3-206ENST00000471968 TNCP24821 2201 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 FSIP2Q5CZC0 6907 aa5.16□□□□□ -1.58
HDAC3-206ENST00000471968 PRAMEF27A3QJZ7 478 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 J3QW42 95 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 UBXN8O00124 270 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 BCAS1O75363 584 aaPredicted RBP5.15□□□□□ -1.59
HDAC3-206ENST00000471968 MAPK1P28482 360 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 IDH2P48735 452 aaKnown RBP5.15□□□□□ -1.59
HDAC3-206ENST00000471968 POLR2HP52434 150 aaKnown RBP5.15□□□□□ -1.59
HDAC3-206ENST00000471968 C1DQ13901 141 aaKnown RBP5.15□□□□□ -1.59
HDAC3-206ENST00000471968 STX1AQ16623 288 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 ZNF181Q2M3W8 571 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 RABL3Q5HYI8 236 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 DCST2Q5T1A1 773 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 TEDDM1Q5T9Z0 273 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 TMEM53Q6P2H8 277 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 EMBQ6PCB8 327 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 LCNL1Q6ZST4 164 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 GOLGA7Q7Z5G4 137 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 ZNF429Q86V71 674 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 LYPD6Q86Y78 171 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 C20orf196Q8IYI0 205 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 LY6G5BQ8NDX9 201 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 OR4Q3Q8NH05 313 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 OR8U1Q8NH10 309 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 RPS4Y2Q8TD47 263 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 C16orf78Q8WTQ4 265 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 DCAKDQ8WVC6 231 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 EME1Q96AY2 570 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 ULBP2Q9BZM5 246 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 ALG9Q9H6U8 611 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 B3GAT2Q9NPZ5 323 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 ABCB10Q9NRK6 738 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 MAN2C1Q9NTJ4 1040 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 MKS1Q9NXB0 559 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 SIGLEC8Q9NYZ4 499 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 NUDT4Q9NZJ9 180 aa5.15□□□□□ -1.59
HDAC3-206ENST00000471968 WDR91A4D1P6 747 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 VGLL3A8MV65 326 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 C12orf77C9JDV5 145 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 PPP6CO00743 305 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 DYNC1I1O14576 645 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 SAP30O75446 220 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 PDYNP01213 254 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 ARSBP15848 533 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 RHCEP18577 417 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 DDCP20711 480 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 HTR3AP46098 478 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 RAE1P78406 368 aaKnown RBP5.14□□□□□ -1.59
HDAC3-206ENST00000471968 GTF2H2Q13888 395 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 KCNJ8Q15842 424 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 HCP5Q6MZN7 132 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 GTF2H2CQ6P1K8 395 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 UNQ6126/PRO20091Q6UXV3 157 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 ACP7Q6ZNF0 438 aa5.14□□□□□ -1.59
HDAC3-206ENST00000471968 EIF3MQ7L2H7 374 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms