RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 SLC2A10O95528 541 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 CECR9P0C854 216 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 DANCRP0C864 163 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 NAAAQ02083 359 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 SPOCK1Q08629 439 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 RFX4Q33E94 735 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 TMEM53Q6P2H8 277 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 DNM1P34Q6PK57 102 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 THSD4Q6ZMP0 1018 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 RASSF6Q6ZTQ3 369 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 OR9Q2Q8NGE9 314 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 TMEM171Q8WVE6 324 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 ITFG2Q969R8 447 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 GPA33Q99795 319 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 DHRS9Q9BPW9 319 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 KCNN2Q9H2S1 579 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 VCXQ9H320 206 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 SIAEQ9HAT2 523 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 CISD1Q9NZ45 108 aaKnown RBP10.32□□□□□ -0.76
VPS52-213ENST00000461743 POU2F3Q9UKI9 436 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 UGT2A1Q9Y4X1 527 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 HIVEP1P15822 2718 aa10.32□□□□□ -0.76
VPS52-213ENST00000461743 TEX13CA0A0J9YWL9 993 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 SLC22A23A1A5C7 686 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 ZNF503-AS2A6NEH8 195 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 ATP6V1G2-DDX39BF2Z307 99 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 ARHGEF9O43307 516 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 SMPD2O60906 423 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 DEAF1O75398 565 aaPredicted RBP10.31□□□□□ -0.76
VPS52-213ENST00000461743 PTHP01270 115 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 HLA-HP01893 362 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 CD79AP11912 226 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 FCGR1AP12314 374 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 ZNF14P17017 642 aaPredicted RBP10.31□□□□□ -0.76
VPS52-213ENST00000461743 GUCA1AP43080 201 aaPredicted RBP10.31□□□□□ -0.76
VPS52-213ENST00000461743 PTDSS1P48651 473 aaKnown RBP10.31□□□□□ -0.76
VPS52-213ENST00000461743 IDH3GP51553 393 aaPredicted RBP10.31□□□□□ -0.76
VPS52-213ENST00000461743 ART1P52961 327 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 TUBA1BP68363 451 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 TUBA4AP68366 448 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 MYBPC1Q00872 1141 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 FMODQ06828 376 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 COX10Q12887 443 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 DYNC1I2Q13409 638 aaKnown RBP10.31□□□□□ -0.76
VPS52-213ENST00000461743 C1orf146Q5VVC0 180 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 AGAP6Q5VW22 663 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 CD300LDQ6UXZ3 194 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 TUBA1AQ71U36 451 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 SLC16A14Q7RTX9 510 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 AQP11Q8NBQ7 271 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 NUP37Q8NFH4 326 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 OR10G2Q8NGC3 310 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 GIPC3Q8TF64 312 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 SMAP2Q8WU79 429 aaPredicted RBP10.31□□□□□ -0.76
VPS52-213ENST00000461743 DNAJC9Q8WXX5 260 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 GTPBP3Q969Y2 492 aaKnown RBP10.31□□□□□ -0.76
VPS52-213ENST00000461743 NABP1Q96AH0 204 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 RASD2Q96D21 266 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 Q96M85 177 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 ZNF75AQ96N20 296 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 GSX2Q9BZM3 304 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 PAPOLBQ9NRJ5 636 aaKnown RBP10.31□□□□□ -0.76
VPS52-213ENST00000461743 VNN3Q9NY84 501 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 IL20Q9NYY1 176 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 DNAJB9Q9UBS3 223 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 FBXO9Q9UK97 447 aaPredicted RBP10.31□□□□□ -0.76
VPS52-213ENST00000461743 BAIAP2Q9UQB8 552 aa10.31□□□□□ -0.76
VPS52-213ENST00000461743 RTTNQ86VV8 2226 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 IGHV2OR16-5A0A0B4J2B6 119 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 GNGT2O14610 69 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 CST2P09228 141 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 MSR1P21757 451 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 CRABP1P29762 137 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 PCBD1P61457 104 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 RAB1AP62820 205 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 NPRL3Q12980 569 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 FAM27BQ5VT28 67 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 B3GLCTQ6Y288 498 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 SYT9Q86SS6 491 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 JAZF1Q86VZ6 243 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 SKA3Q8IX90 412 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 FBXL14Q8N1E6 418 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 DRAXINQ8NBI3 349 aaPredicted RBP10.3□□□□□ -0.76
VPS52-213ENST00000461743 NRBF2Q96F24 287 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 DUS3LQ96G46 650 aaKnown RBP10.3□□□□□ -0.76
VPS52-213ENST00000461743 SAMD8Q96LT4 415 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 ERMAPQ96PL5 475 aaPredicted RBP10.3□□□□□ -0.76
VPS52-213ENST00000461743 TRAF4Q9BUZ4 470 aaPredicted RBP10.3□□□□□ -0.76
VPS52-213ENST00000461743 IFT27Q9BW83 186 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 C1QTNF6Q9BXI9 259 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 RACGAP1Q9H0H5 632 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 ZNF442Q9H7R0 627 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 NOX3Q9HBY0 568 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 ZNF701Q9NV72 531 aaPredicted RBP10.3□□□□□ -0.76
VPS52-213ENST00000461743 ARMC1Q9NVT9 282 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 IER3IP1Q9Y5U9 82 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 U3KQV3 271 aa10.3□□□□□ -0.76
VPS52-213ENST00000461743 IGKV1D-43A0A0B4J1Z2 117 aa10.29□□□□□ -0.76
VPS52-213ENST00000461743 DPPA5A6NC42 116 aa10.29□□□□□ -0.76
VPS52-213ENST00000461743 E7EQL1 145 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms